Crassostrea virginica (eastern oyster): 111130702
Help
Entry
111130702 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: codanin-1-like
KO
K19531
codanin-1
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvn03036
]
111130702
Chromosome and associated proteins [BR:
cvn03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
111130702
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Codanin-1_C
RuvC_1
Motif
Other DBs
NCBI-GeneID:
111130702
NCBI-ProteinID:
XP_022333610
EnsemblRapid:
LOC111130702
UniProt:
A0A8B8E051
LinkDB
All DBs
Position
4:complement(8568143..8585182)
Genome browser
AA seq
1479 aa
AA seq
DB search
MASILEYVLSGELQVDTLVSFLKRNHQDAQDVLQKENTPIQLKDFHYLHQEFIPFLLNYL
RDQTIHLLQSSKSTTPSPAKTPSAQKFRKCVNEEKSSSASTSSKRIQLFGASPGDGIDDI
KLTTGSFFSPNTSVEIKTPSLKTPTNQDKVGKGDKKSTSICNQQTPAGRNSADRDHKLKG
GRGNTPHSGSKGNQDGRSKHRFSLGEFLVSPEVTSSTGKRKNSPFSGKKNEKINDNSPSP
IPSNVKSGYKKRHSVETEHPNCGQPAPVFSLGSTDEFPPVGCDSKQVTPRVYDLVGDKGN
LTNMILRNSPNFDQTPRAIKSNPITKSRRISFTTVSGLSQEGSTESNSTPSRRINPTPVS
GKPFRTQTNAFIEQESSENNESSPGVDKRHLDEERELLRKERAKRLQNKGDTRSESPDVP
HCNTPTKLMERSTSTVDIVVADVNEVTHKIELDKLVLLYSACLSENLFPNVTMELYFLMQ
LLTSRGIDMELIAVYGEDVLENNFFSTVHNSVYFAVSVLQKQRRLLLCLDKGTLRLLSEN
TRIQQFSSNLCDWLSSIVESKTQQVGPVFPKSPIGSVSFQAETDNRKNFPDDRTFHLFKR
QRDGFYEILRVWERHHMVPGWSFTEVLGGKVRAMVSTKTELSNHLHFARLFQSQLIAMCK
GDSSGMVETGDEDVALLSQLKRSNPEKFKKLQERFIKPXSFGGPCPVPAFPGCQEFFHDF
IIAASSTIFNQHLSDTFASKILELNSLSYLSEEETGSEDSGDELKEVFISNLLTLRLLGK
FLGFVSFLPYQTTAKLPDEMEATYLSIRRNHLPYLDLVECIKEALALQRLTLTIPWVVEF
LSMMDVLAPKLDHFKMTLFLLLVIHRDCWRDFDQGNYGYLLIVTMISWLLDISVVPEGFF
FVEIPVDVMDVVSSVKTKTTTQLDNLMFVDQSIYYSCCPYLLELRSILTEFAVGCSSKTS
TIRKITPVSAEDPSTPKPSDVHIQLQLEENFFHNHPASLKRCVDFVAERTASNFIKKFRS
LSLQKLLGDSRQALNAHLMTQSGGSPSGKAKDKLQHDILKIAQEHVTQAKSVVAKDVGSY
CEGKIQALVPLLLPDEQSDCVKQTSTEIATRLSQEKVHSWINKHITVQMFQSELTLELDR
ILKSQLLSQTRALNGSDVSVLGTLAESSFEVITKEHDDNTRPPSDVLIDIKDTVKAIILK
NVNPEKGKVKNLLQETKVILERRQDWLPGIFRSYGQLVLDLCLSLFCHFPEEWSVEDIGD
XEDLWTGPLRSAISFSSVVNSYSLKMLEDSPNPKSAWMNFEKLLLLLIRLSLLRTSDLQQ
SCLNILSDSQGCIENLAVCLCHLVXKLDNDPEYTEECDLADILEWIYQICGADAPISRFI
LQTLKLDSSTSQGLDPLSCEHMQANSDKTCDISTEDVGSCVKGTILNSRFVKCSNINHTV
CSDACMCSSKCCKHVKDVQGNIDTLTISGQECESEHSSL
NT seq
4440 nt
NT seq
+upstream
nt +downstream
nt
atggcctctattttagagtatgttcttagtggtgagcttcaagtagacactctagtgtct
ttcttaaagagaaatcaccaggatgctcaggatgtcttgcagaaggaaaacactccaatc
caactgaaggactttcattatttgcaccaagaatttattccgtttttgttgaattatctt
cgggatcaaacaatccatcttttacaaagttcaaagtcaacaacaccatcacctgctaaa
actccatcagctcagaaatttaggaaatgtgtcaatgaggaaaagagttcctcggcatca
acatcgtcaaagagaattcagctatttggagctagccctggtgatgggatcgatgacatt
aaactaaccactggttcattcttttctccaaacacctctgttgaaatcaaaacaccaagt
cttaaaacaccaactaatcaagacaaggttggaaaaggagacaagaaatctacgtcaata
tgtaatcaacaaactcccgcgggccgtaattctgcggatcgagaccataagttaaagggt
ggaagaggcaatactcctcacagtggaagcaagggcaatcaggatggaaggtcaaaacat
agattcagccttggggaatttttagtgtcaccagaggtcacaagctctactggaaagaga
aaaaactctccattttcagggaagaaaaatgagaagatcaatgataattccccctcacca
ataccatctaatgtgaagtctggatataaaaaacgtcattcagttgagactgaacaccca
aactgtggtcaaccagctcctgtattcagcttaggtagcactgatgagtttccacctgtg
ggttgtgatagtaaacaagttactccaagagtctatgaccttgtaggggataaaggaaac
ctcacaaatatgattttgagaaactcccctaattttgaccaaactccccgtgcaataaaa
tctaaccctattaccaagtctcgcagaattagcttcactactgtcagtggcttgtcacag
gagggatcaactgagtctaatagcacaccctccagaagaattaaccccacccctgtttct
ggaaaaccatttcggacacagacaaatgccttcattgaacaagaaagctcagaaaacaat
gaaagtagtcctggtgtagacaagagacatctagatgaagaaagagaattactcaggaaa
gaaagagctaagcgtcttcagaacaaaggagacacaagatcagagagtccagatgttcca
cactgtaatacaccaactaaactgatggaacggtcaaccagcacagtggacattgtagtg
gctgatgtcaatgaagtcacccacaaaattgaactggataaactagtgctactttattca
gcatgtcttagtgagaatttatttcccaatgtgaccatggagctatactttctgatgcaa
ctgttgacatcccgaggaattgacatggaactcattgctgtatatggagaagatgtgctg
gagaacaatttcttttccacagtccacaactcagtgtactttgctgttagtgttcttcaa
aaacagaggaggttgctgctgtgtttagataaaggcacactcaggcttctgtctgaaaac
acaagaattcaacagttttcatcaaacctttgtgactggttgtcaagtattgtggaaagt
aaaacccagcaggttggtccagtctttcccaagtctcccataggaagtgtttctttccag
gcagaaacagacaacaggaaaaacttccctgatgacaggacatttcacttgttcaaaaga
caaagggatgggttttacgagattttgcgggtgtgggagagacatcacatggtccctggc
tggtctttcacagaggtcctggggggcaaggtccgagccatggtcagcaccaagaccgaa
ctctcgaatcacctccacttcgccagactcttccagtcgcaactcattgctatgtgtaaa
ggagacagcagtggaatggtggaaactggagatgaagatgttgccttgttaagtcaactg
aagcgttcaaatccagaaaagtttaaaaaactacaggagagattcatcaagcccntgagt
tttggtggaccctgtccagtaccagcattccctgggtgtcaggaattcttccacgatttc
attattgctgcatccagtactatctttaatcaacacttgagtgatacctttgcttcaaaa
attctagagttgaactccctgagttatttgtcagaagaagaaacaggtagtgaagactct
ggtgatgaactgaaggaggtcttcatctctaacctgttgaccctgagactactggggaag
ttccttggttttgtttcctttcttccttatcaaactacggccaaactaccggatgagatg
gaggctacatatttatctatcagaagaaaccacctgccctaccttgatttggtggaatgc
atcaaagaggccctggccctccagcgactcaccctgaccatcccctgggtggtggagttc
ctcagcatgatggatgtgctggcgcccaaacttgaccatttcaagatgactctgttttta
ttgctagtaattcacagggattgttggagagactttgatcaaggaaattatggttacctt
ctcattgtgacaatgatcagctggttgttagatatttctgttgttcctgaggggttcttt
tttgtggaaattcctgttgatgtcatggatgttgtctcctctgtcaaaaccaaaactaca
acacaactggataacttgatgtttgttgaccaaagcatttattattcctgttgcccatat
ctgttggagctgcggagcattttgacggagtttgctgttggatgcagcagcaagacctcc
actatccggaaaatcacccctgtgtcagctgaggaccccagtactccaaagccctcagac
gtacacattcagctgcagttggaggagaatttcttccacaaccacccagcctctctgaag
aggtgcgtggactttgtcgcagagagaacagcctccaacttcatcaaaaagttccgctcc
ctgtccctacagaaattactgggtgacagtcgccaagcattaaatgcccatcttatgacc
cagtctggaggatcgccaagtggcaaggctaaggataagttgcaacatgatattttgaag
atagcacaggagcatgtgacccaggctaaatcagttgtagcaaaagatgttggcagttat
tgtgaggggaagatacaagcattggtgccgttactgctgccagatgaacagtctgattgt
gtgaagcaaacctccacagaaatcgccactcgcctgtcccaggaaaaggttcactcctgg
atcaacaagcatattactgtccagatgtttcagtcggagctgaccctggaattggacaga
attttaaaatctcagcttctcagtcaaacccgcgcattgaatggctcggacgtttcagta
ctgggcactctggctgaatccagctttgaagtcattaccaaggagcacgatgacaacaca
aggcctccgtctgatgttctcattgatatcaaagatactgtgaaagccatcattctgaaa
aatgtcaatcctgagaaaggaaaagtcaaaaatctattgcaagagactaaggtcattcta
gagagacgacaggactggctgccaggaatcttcagatcttatggacaactggtgctggac
ctctgtctctctctgttttgccattttccggaggagtggagtgttgaagacataggagac
nttgaggacctttggacaggtcctctgagatctgccatctccttctcctcagttgtcaat
agttactcccttaagatgctggaggattctccaaatccaaagtctgcatggatgaacttt
gagaagttgctgttgctgttgatacggctttcgttgctgcgtacaagtgatttacagcag
agctgtctaaatattttatcggattctcagggttgtattgagaatttggcagtttgtctt
tgccacctagtgngaaaacttgacaatgatccagagtacacagaagaatgtgatctagct
gatattctggagtggatctaccagatttgtggagcggatgcccctatctccaggttcatt
cttcaaactctaaaattagactcctctacaagccaagggttggatccactgagttgtgaa
cacatgcaggccaattcagacaaaacatgtgatatttctactgaggatgttggaagctgt
gttaagggaaccattctgaattctagatttgtaaaatgtagtaacataaaccatactgtg
tgttctgatgcttgtatgtgttccagcaagtgttgtaaacatgtgaaggatgttcagggg
aacattgacacacttaccatttctgggcaagaatgtgagtctgagcatagttcgctttga
DBGET
integrated database retrieval system
