Crassostrea virginica (eastern oyster): 111130897
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Entry
111130897 CDS
T09197
Name
(RefSeq) acetylcholine receptor subunit beta-like
KO
K04807
nicotinic acetylcholine receptor alpha-5
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111130897
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvn04040
]
111130897
Ion channels [BR:
cvn04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
111130897
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
111130897
NCBI-ProteinID:
XP_022333878
UniProt:
A0A8B8E255
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Position
4:29805247..29825729
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AA seq
436 aa
AA seq
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MKPILQAYIGFCLLSAVLCQIGGGSPPTYSRSLETALRTELFTGYSVLQRPEDRMRVKVS
LTLLTVNDMDIKNQLMSVSGYLSVSWSDDRLSWSNTSSTSQDYSNVRFLFSNEVYVWSPA
LIIENSVDSLTVISDKNIPMRINNQGLINWNPAGIYLVSCSSDITYYPLDQQVCTVKVST
WGYTTNEIFLVYDTQPVELGFYSENGEWELVGAVGEPTQDRARGGQSFSSLSFSITLRRR
PLFHALNTILPVVLMAFLIPMVYRLPVDSGEKIGYSLTVLLAYAVYLTLISDNIPSTSVS
VCYLTVFLVIVLALGVLSVLFVIMVIAAYHKGDKPVTSCMARVGHLMARATCADHGVCCR
KKQNQDVVTPIAPESNKLSAELDKKQYLEGESPEAQMTYQEYAIILDHFLFYAYFMTVTL
TTFLFTLLGIVHFYTL
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgattctacaagcctatattggattttgtctgctgtcagcggttctctgtcag
atagggggcgggtctccgcccacctactcccgcagcctggagactgcactgaggacagaa
ctgttcactggctactccgtgctgcagaggcctgaggacaggatgagggtcaaggtctct
ctcaccctgctcacggtcaacgacatggatatcaagaaccagctcatgtcggtctctgga
tatctgtcggtgagttggagtgatgatcgcttgtcgtggtcaaacacctcgtcaacctct
caagattattccaatgtccgattcttgttcagcaacgaagtctacgtgtggagtcctgcg
ctgattatagaaaactcagtcgattcactcacggttatcagcgacaaaaatataccaatg
agaatcaataaccaagggctaatcaattggaaccccgcaggaatctacctagtgtcctgc
agttctgatataacctattaccctcttgatcaacaagtttgtacagtgaaagtcagcacc
tggggatacacaaccaatgaaatattcctagtctacgacacccaaccagtagagttgggc
ttttacagtgaaaatggagaatgggagctagttggcgcggtgggagagcccacccaggac
agagcacgcgggggacagtctttctcaagtctcagcttcagcatcactcttcgcagacga
ccattgtttcacgcccttaacactattctacctgttgttctcatggcgttcttaatccca
atggtatatcgactaccagtggattccggagagaaaattggatactccttaaccgtattg
ctagcttatgctgtatacttgacgctgatatccgacaatattcccagtacctcagtctca
gtttgctatcttactgtgttcctggtcatcgttctggctcttggagttctttcggttctc
tttgttataatggtgatcgcagcttatcacaagggagacaaaccagtcacatcatgcatg
gctcgagttggtcacctcatggccagagctacgtgtgctgatcatggtgtttgctgccgt
aaaaagcagaatcaagacgttgtgaccccaatcgctccagaatctaacaaactctcagcg
gaattggacaaaaagcaatatttagagggcgaaagcccagaggctcagatgacatatcaa
gaatatgccataatattagaccattttcttttctatgcttacttcatgactgttacacta
acaacctttttatttacacttcttggaattgtccatttctacactttgtaa
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