Crassostrea virginica (eastern oyster): 111130900
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Entry
111130900 CDS
T09197
Name
(RefSeq) endoplasmic reticulum membrane-associated RNA degradation protein-like
KO
K25139
endoplasmic reticulum membrane-associated RNA degradation protein
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
111130900
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Gene cluster
GFIT
Motif
Pfam:
DUF4209
DUF5744
Motif
Other DBs
NCBI-GeneID:
111130900
NCBI-ProteinID:
XP_022333881
UniProt:
A0A8B8E3J4
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Position
4:14811719..14831603
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AA seq
681 aa
AA seq
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MEIFGVETCFSAKVHFLITKVGKDKLNERSFSLTPEGCIDWEKACSYLPGARSDSHEYFV
TAVEALSPVFFEAEKHLLSSQWEDIWIKHKNHLKWIPENHHQAVEDSLKYLRSDNSSAHL
LALQLLSSILERALGDVFENESCLQCPSLLKDILNSREITQVFGTRVIQILRILMGPPTS
LNLRNLVWHGFSSPGEIPRRYGCFLYLTIPSLGRILEDKGKQPVAHRKLMELELDPSITR
DFPDLKNHLSTVKTMIDITQSLHGRKTLLQCILGLVEDQRSMHAAILLLPQLEHLLRLTF
ASVNSCSERVLTAESDTLFTTLSEIFEKYLPNGDVNRISETLGESLMDLLFDLLVYPDGP
RIRDRVGHGESNLQNFPESLSSAIVLAFVLVLWKCSKSADQNALFKDLTIFETQYSAFYH
PLSIVKQKILQVAEDVARLPDVLQYDAELTPRKEPQHNSLLEILTIKADKDMFEAIQDVT
KDMLQLICQDLGILQTPEEISNSLFQVFSDGRTMFQMFLEGKISTLYRFCDKQQNTLDFA
SKGTGACEAVIAGLLSRILTELQTSIQQVMSTLSVRQKQLADRCLRSRQRDNLIRLIRSC
PFHCHSAHVVLLLCSWKLYTLSIHTGPKLLRFLKQLLQFVENLRTLTNPENNKWTDCVTA
YREFMLKAKAALTELEKQRTP
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggaaatctttggagtagaaacgtgtttttctgcgaaagtccatttcttgataactaag
gtaggaaaagacaaattaaatgagagatccttttccttgactccagagggctgcatagat
tgggagaaagcatgcagttacctgccaggagcaagatcagacagccatgagtattttgtg
actgcagtggaggccctctcaccagtgttctttgaagcagaaaaacaccttttgtcaagt
caatgggaagacatctggataaaacataaaaaccacctaaaatggattccagagaatcac
catcaagctgtggaagattctctgaagtatctgaggtctgacaattcttctgctcacctg
ctggcattacagctgctttcatccattttagagagagcacttggtgatgtttttgaaaat
gaaagctgtcttcaatgcccctccctcctgaaggacattctcaattcaagggaaataact
caggtgtttggaactcgtgtgattcaaatattaaggattttgatgggtccacccacttct
ttgaacctcaggaaccttgtttggcatggtttctcaagtcccggagaaatacctaggagg
tatggatgttttctttacttaactatacccagtttggggagaatcttagaggataaggga
aaacaacctgtagcccacaggaagctgatggaactcgaactggacccttctatcactcgg
gattttcctgatttgaaaaatcatctatcaacagtgaagacaatgatagatatcacccaa
tcacttcatggtcggaaaacactcttgcagtgcattctgggattggtggaggatcaaagg
tcaatgcatgcagccatcttgttactgcctcagctagaacacttgcttaggctaacattt
gcctcagtaaactcctgctcagaaagagtgctcacggctgaatcagataccctgttcacg
acactgagtgagatttttgaaaaatacttaccaaatggagatgtcaatagaatttctgaa
acacttggagaaagtttgatggacctattgtttgaccttttggtttaccctgatggacct
aggatccgagacagggttggtcacggtgaatcaaatttgcagaatttcccagaatcctta
tcatcagctattgttcttgcatttgttctagttttgtggaaatgttccaaatctgcagat
cagaatgctttgtttaaagatttgacgatctttgagactcagtactccgccttctaccat
ccattgtccatcgtcaagcaaaagattttacaggttgcagaggatgtggccagacttcct
gatgtcttgcaatatgacgccgaattgacaccaaggaaagaaccacaacacaactcccta
cttgagatactgactataaaggcggacaaggacatgtttgaagcaatacaggatgtgacc
aaagacatgctacagttgatctgtcaagacttgggaatattgcagactcctgaagaaatc
agtaacagtctttttcaggtctttagtgatggaagaacgatgtttcaaatgtttttggag
ggaaaaatctcaacactgtacagattttgtgacaaacagcaaaacactcttgattttgcc
tcgaaaggaacaggtgcttgtgaggcagtgatagctggactgctgtctcgcatactgact
gagttacagaccagtatacagcaagtaatgagtacactcagtgtcagacagaaacaactc
gctgacagatgtctcaggtccaggcaaagggacaacctcatcagactcataaggagctgt
ccgttccattgccacagtgcccatgttgttctgttgctctgttcctggaagctttacact
ctcagtatccacactggaccaaaacttctcaggtttttgaagcagttattacagtttgtt
gagaatcttagaacgctcaccaatccagagaataacaagtggacagattgtgtgacagcg
tacagagaattcatgctaaaggcgaaggctgctttaaccgagttggaaaagcaacgaact
ccataa
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