Crassostrea virginica (eastern oyster): 111130916
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Entry
111130916 CDS
T09197
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator homolog isoform X1
KO
K09097
aryl hydrocarbon receptor nuclear translocator
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
111130916
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvn03000
]
111130916
Transcription factors [BR:
cvn03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
111130916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS
HLH
PAS_9
PAS_4
PAS_2
Per3-like_PAS-A
bHLH_NCOA
bHLH_INO2
Motif
Other DBs
NCBI-GeneID:
111130916
NCBI-ProteinID:
XP_022333898
UniProt:
A0A8B8E278
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Position
4:complement(27257810..27290526)
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AA seq
697 aa
AA seq
DB search
MDYSNLHYQGSSNHCYDFNQGPSRQHLFSGVAPIPVTYTEMAVYGTPDNSKGGNRKRKGG
SGRESDEEDGQGGGYNQEQADKERFARESHCEIERRRRNKMTSYINELCDMVPTCSTLAR
KPDKLTILRMAVSHMKTLRGTAGNTSVDGTYKPSFLTDQELKHLILEAADGFLFVVQCDS
GRLIYVSDSITQVLNQSQADWFGNSMYDLVHPDDVEKVREQLSTTESQNTGRILDLKTGT
VKKDSHQTSIRLCMGSRRGFICRMKMGNMDVNSMNSSHTHRARQRNTLGPSPDGNHYTVV
HVTGYIKNWPPSGVQMDRDSDENSSTHCCLVGIGRLQVTSTPNCSDLMGPNGSTEFISRH
NMDGKFTFVDQRVTPVLGYQPADLLGKSAFDFYHPEDKAHMKDTFDQVLKLKGQVMSIMY
RFRASNHEWVWLRTSSFSFQNPYTDEVEYIVCTNTSAKSVQQGAGASTAQGMPSEQPQDP
TPSMASFNTPPRGPMPAEMNMQSANKHEFREPFQDYSSVLTGARQVGRPEMYNFNSPSQM
KYPGQGPTTSMPMSQASGVTGVRRSPNPGGWAGPTGFPPNQGGTDFSNNPASGFSQISPN
SSSPAGPPTYTQLGSQSIPSSQPNNFSHSSPPSTTGQGMWPPHWQGGAAEAPQNPQGQQA
PPPNGQQNEEFSDVLRMLDPPGQEFNDLSGMFNTFQD
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggattactcgaatctccactatcaaggttcatccaaccactgctatgacttcaatcaa
ggaccaagtagacaacatttattttctggggttgcaccaataccggttacatatacagaa
atggcagtttatgggacacctgataattccaaaggagggaatcgaaaacgcaagggtgga
tccgggagggagtcagatgaagaagatggtcagggtggagggtataaccaagagcaggcg
gacaaagaaagatttgccagggagagtcattgtgagattgagagaaggagaaggaataag
atgacctcatacatcaatgaactctgtgacatggtgccgacctgcagcacactggccagg
aaacccgacaaactgaccatcctcagaatggccgtctcccacatgaaaactttaagaggt
acagccgggaacaccagcgtggacggcacctacaaaccctccttcctgaccgaccaggag
ctcaaacatctcattctggaggctgctgatggatttctttttgttgttcagtgcgactcg
ggcaggctaatttacgtctctgattccatcacccaagttctcaaccagtctcaggctgat
tggtttggaaactccatgtatgatttggtccacccagatgatgtggagaaagtaagagag
cagttgtccactacagaatctcaaaacactggccgaattctagacctgaaaactggaaca
gtcaagaaagacagtcaccaaacctccatcagattgtgcatgggttctcgccgtggcttt
atatgtcgaatgaagatgggtaacatggacgttaacagcatgaactccagtcacactcat
cgagcacgtcaaaggaacaccctgggcccctccccagacggaaaccattacacggtggtc
cacgtcacaggctacataaagaactggccaccctcaggtgtccagatggacagggattcg
gatgagaattccagcacccactgctgtttggtcggcattggtcgtctccaggtcaccagt
acccccaactgcagtgatctgatgggccccaatggaagcaccgagttcatctccagacac
aacatggacgggaagttcacctttgtagaccaaagagtaacaccggttctaggatatcag
ccagctgatcttcttgggaaatctgcctttgatttctatcacccagaggataaagcacac
atgaaagatacatttgatcaagtgctgaagctgaagggccaggtgatgtccatcatgtac
agattcagggcctccaaccatgagtgggtgtggctgagaaccagtagcttcagcttccag
aacccctacactgatgaagtggagtatattgtctgcacaaacacctcggccaaaagtgtt
cagcagggggccggtgcctccactgctcaagggatgcccagtgaacaaccacaagacccc
accccgtccatggcctcatttaacacccctccgaggggccccatgccagctgagatgaac
atgcagtccgctaacaagcatgaattccgcgaacccttccaagattacagttctgttcta
actggagctagacaggtgggcagaccagaaatgtacaactttaactccccctctcaaatg
aaataccccgggcagggcccaaccaccagcatgcctatgtcccaggcatctggtgtaacg
ggggtccgaagaagtcctaaccctgggggctgggctggacccacagggttccccccaaat
cagggaggcactgattttagcaataaccctgcttctggattttctcagattagtcctaat
agctcgtcacctgccggccctccaacatatactcagcttggatcacagagtatccccagc
tcacagccaaataacttttctcattcctctcccccctctacaactgggcagggcatgtgg
ccacctcactggcagggaggggctgcagaagctccccagaacccccaagggcagcaggct
ccccctcccaatggtcagcagaacgaggagttcagtgatgtgttacgtatgctggacccc
cctggtcaggaattcaatgatctctcagggatgtttaacacattccaggactaa
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