Crassostrea virginica (eastern oyster): 111130920
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Entry
111130920 CDS
T09197
Name
(RefSeq) nuclear pore complex protein Nup133-like
KO
K14300
nuclear pore complex protein Nup133
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111130920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvn03019
]
111130920
03036 Chromosome and associated proteins [BR:
cvn03036
]
111130920
Messenger RNA biogenesis [BR:
cvn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111130920
Chromosome and associated proteins [BR:
cvn03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
111130920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
UPF0223
Motif
Other DBs
NCBI-GeneID:
111130920
NCBI-ProteinID:
XP_022333914
UniProt:
A0A8B8E2G9
LinkDB
All DBs
Position
4:18993400..19012500
Genome browser
AA seq
1134 aa
AA seq
DB search
MFSPRTPATRARSSPYTSSGMTPRSQNKRGSNLFTPKGRQSSFTQKSQPNRSLHTSQLIQ
ESEGYRIEGFGTPLPVLITEALTLADKHTEITVKIDPSGWAWLVGGRKLFVWRYKGGHNA
RTVFCKELTLPPSDLAHNAERVCVIPSVSDRQSASCIAVSPEGIVRYWPNIAYEGSSTEI
SAELRGDECASVVNFEPFGCLLATTTSSLVLLSPVSGQNTLTCHPLKGSQGMFSGIGRRM
SSFIFGASTLQPSGAPLQAIVCGRCEEEEDERPFYVLSGTQFQKWNISHPLTEKLFYQID
VERMFREFLSKKVWNQDSRQLPQLKTWLLDMQSTQQGVVFLGAGVNMDVDLTVHFGLAFL
DTDINGTPSELESLMILDYQDVYSEDFEYSLQKYRLLLADPNTTTAYVYNREHILFIPGP
PSDVINLQPPGGHILGAGSSDGVGVFFSASTGLFSINTPQRQEVSIMEEPSQDMTTADMS
VLTASHAKIQELSMSEDRTARLKSAFIATMRGNIAAAQSTIDDLFPVDEVTTDLDHTVVS
LDRDLVDDYPASDPRWAESRQDSTSSTTSFIIINQLNDKLRAHEYVINFLRKMNLWGKLK
QVTIRDGRMLTRHVMCEHAEKLQAAIALRQLHGEFSGIVDAAIKKVLERRMDVTMSHNLT
PQDIFYREVSRIQEIVGCLLEYQEEVLLADVTPTEILTVIMSINTLLEEMLHKALQFRQS
RASLYESDAPEGEVPEYVPWTSTGGDHGIRTLLLKQFNKTVEEVIPEVHDSEGLEKTYRQ
LASLADLVLDGYSSQLDSLRENSSRQQHYGELQRRFEQDRQLLITPLMEGKQLELAASLA
EKYYDFEILIQLCELSDNTERIEKYLRQFSDRGFANYLYTWYMKEGKRGKLLALPVSQQR
ELGKFLQKEDIKTLSWLHNIQTDNYAKAHTTLLELAKMEQASLSKKKTLLSLSKLAGVAA
DPDNGDIDSNILDINEEQELIAHQQQLPTLVIENLRMEPDNMAVLSPVQLIELYISGTNI
DATEYDFKKALDLLQYIDKTDSTVDYESLRMHIWAQSILRDSWQQDEAVDVMEAIMNTVF
FKTVDLAYKEGVDVKTFMPGLKSIFDCDELGDLKDEANFRYLIQAGYEHIGQVL
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcccaagaacaccggcgacccgagcccggtcgtcgccttacacatcctcagga
atgactccacggagtcaaaataaaagggggtctaatttattcactccaaaagggagacag
tcatccttcacccaaaagagccagcctaataggtcactacacacttctcagctgatccag
gagtcggagggctacaggatcgaaggattcggcacacctctccccgttcttatcactgag
gcactgacattggccgataaacacacagagattacagtaaagattgacccctctggatgg
gcatggttggttggaggaagaaagctctttgtgtggagatacaaaggaggacacaatgcc
aggactgtgttttgcaaggagctgaccctcccccctagcgacctagcacacaatgcagag
cgtgtctgtgtcatccccagtgtttctgaccgacagtcggcgtcctgcattgctgtgtca
ccagagggcattgtaaggtactggcccaacatagcatacgaagggtcatcaacagaaatc
agtgcagagctgagaggagatgaatgtgcaagtgttgttaactttgagccctttggatgt
cttcttgccaccaccacaagctcactggtcctgctgtcaccggtatcaggtcagaacact
cttacctgtcatcctctgaaaggctcgcagggcatgttctcggggatcgggaggagaatg
tcatcctttatattcggggcctccaccctgcagccatccggagcgcctttacaagccatt
gtttgtgggcgctgtgaggaggaagaggatgagcgtccattttatgtgttgtctgggaca
cagttccagaagtggaacatttcacatcccttgacagaaaagcttttctatcagattgat
gtagagagaatgttcagggaatttctctcaaaaaaagtttggaaccaggactcgcgacaa
ctgccccagttaaagacatggctcctggacatgcagtccactcaacaaggagtagtcttc
cttggtgcaggggtgaacatggacgttgacctgactgtacattttggcctggctttcttg
gacacagacattaatgggacacctagtgaactggagagtctcatgattctggattaccag
gatgtttactcggaggactttgagtacagcctccagaagtatcgactgttgctggctgac
cctaatacaaccaccgcctacgtgtacaacagagaacacatcctcttcatcccaggacca
ccttcagatgtgataaacctacaaccaccagggggacatattcttggggcaggatccagt
gatggtgtgggggtgttcttctccgccagtaccgggctgttctccatcaacacgccccag
aggcaggaagtcagtataatggaagagccttcacaagacatgaccactgcagacatgtcc
gtcctgacagctagtcatgccaaaatacaggaactgtccatgagtgaggacagaacggcc
cgtctcaaatccgccttcatagccaccatgcggggcaatattgcagctgctcagtccacc
attgacgacttgtttcctgtagatgaggtgacgacagatttagaccacacagtggtctcc
cttgaccgggatctggtggacgattatccagcctcagacccacgctgggccgagtccaga
caggattccaccagcagcaccacttctttcatcatcatcaaccagctgaatgacaaactg
cgagcccatgagtatgtcatcaacttcctaaggaagatgaacctgtggggaaagctaaaa
caggtgacaatacgagatggccgaatgctgacaagacatgtgatgtgtgaacatgcagag
aaacttcaggcagccatcgccctgcgccagctccacggggagtttagtggcattgtggat
gcagctattaagaaggttctggagcggagaatggacgtcaccatgtctcacaatctcacc
ccacaggatatcttctacagggaggtgtctcggatccaggagattgtggggtgtttgttg
gagtatcaggaggaagtgctgctagctgatgtcacccccactgagatcctcaccgtcatc
atgtccatcaacaccttactggaggaaatgctgcacaaagccctgcaattccgccagtcc
cgagcctctctgtacgagagtgacgcaccagagggggaagtccccgagtatgtcccgtgg
acgtccaccggtggggatcatggaatcagaacactcctcctaaagcagttcaacaagacg
gtggaggaggtgattccggaggtccatgactcggagggtctggagaagacgtaccgacag
ctggcctctctggctgacctcgttctggacggctactcgagtcagctagactccctgagg
gagaactcaagccggcagcagcactacggcgagctccagcggcgattcgagcaggaccga
cagcttctcatcacccccctcatggaagggaaacagctggagcttgccgcctccctagcc
gagaagtactacgactttgagatcttgattcagctgtgtgaattgtctgacaacactgag
agaatagaaaagtacctccgccagttctcagaccggggctttgccaactatctttataca
tggtacatgaaagaaggtaaaagaggcaagcttctagccttacctgtcagccaacagagg
gagctggggaagtttctacagaaagaggacatcaagaccctgagctggctccacaacata
cagaccgacaactacgctaaggctcacaccaccttgttggaactcgccaaaatggaacaa
gcttcattgtccaagaaaaagactctgttaagcctgagtaaattagctggtgtggcagct
gatcctgataatggagatattgacagcaatatactggacataaatgaagaacaagagtta
atagcccatcagcagcagttacctacccttgtcattgagaacctgcggatggagccagac
aatatggcagttctctcccctgtccagttgattgagttgtacatctcaggaaccaacata
gatgccacggagtatgatttcaagaaggctctggatctgctgcagtatatcgataagacg
gactccactgtggactacgagagtctcaggatgcacatctgggcccagtccatactccga
gacagctggcagcaggatgaagctgtagatgtgatggaggctattatgaatacagtgttc
ttcaagacagtcgacttggcctacaaagagggagtggatgtgaagacattcatgccagga
ctaaagagtatatttgactgtgatgaactcggtgatctgaaggatgaggccaatttccgg
tacttgatccaagctgggtatgaacacatcggacaggttttgtga
DBGET
integrated database retrieval system
