Crassostrea virginica (eastern oyster): 111131013
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Entry
111131013 CDS
T09197
Name
(RefSeq) THO complex subunit 7 homolog
KO
K13176
THO complex subunit 7
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111131013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvn03019
]
111131013
03041 Spliceosome [BR:
cvn03041
]
111131013
Messenger RNA biogenesis [BR:
cvn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
111131013
Spliceosome [BR:
cvn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
111131013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
Peptidase_S10
Exonuc_VII_L
DUF4407
CENPH
ABC_tran_CTD
DNA_repr_REX1B
NPV_P10
APG6_N
LMBR1
Motif
Other DBs
NCBI-GeneID:
111131013
NCBI-ProteinID:
XP_022334040
UniProt:
A0A8B8E1C4
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All DBs
Position
4:complement(46742808..46753599)
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AA seq
198 aa
AA seq
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MAVNDDDVIKRRLLYEGDGGSDDKRINSLMKNFIRWNNATESPEENALGFERMMASLTQC
EYTMEKSLLVHNMNTKEQENYNQLSQDIEAKIQEATEKIAECKNELAQAKRIRKNRQEYD
SLARVIQQHPDRQETTKQLQGLDKDVSSLEEQKKSLEQKLDLRRKQFHVLIAAIHELENI
LDEDETKEGEGAEKMETN
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggcagtaaatgatgatgacgtgattaaaagacgcctgctatatgaaggtgatggaggg
agtgatgacaaaagaattaacagcctgatgaagaacttcatccgatggaacaatgctaca
gaatctccagaagaaaatgctcttgggtttgaaagaatgatggcttccttaactcagtgt
gaatacacaatggagaaatcgttactggttcacaacatgaacaccaaagaacaagagaat
tacaaccaactcagtcaagatatagaggcaaagattcaagaggccactgagaaaatagcg
gagtgtaaaaacgaattagcacaggccaaacgaatccgcaaaaatcgacaagagtatgat
tccctagcccgagtaatacagcaacacccagacagacaagaaacaaccaaacagttacaa
ggtttagacaaagatgtgtcaagtttagaagaacagaagaaatctcttgaacaaaagttg
gatctcagaagaaaacagttccatgtcctgattgcagccattcatgaattagaaaacatt
ttagatgaggatgaaactaaagaaggtgaaggtgctgagaaaatggagacaaattga
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