Crassostrea virginica (eastern oyster): 111131108
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Entry
111131108 CDS
T09197
Name
(RefSeq) NF-kappa-B inhibitor alpha-like
KO
K04734
NF-kappa-B inhibitor alpha
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
111131108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvn03000
]
111131108
04131 Membrane trafficking [BR:
cvn04131
]
111131108
Transcription factors [BR:
cvn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
111131108
Membrane trafficking [BR:
cvn04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
111131108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_3
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
111131108
NCBI-ProteinID:
XP_022334190
UniProt:
A0A8B8E1T0
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Position
4:complement(41597735..41600296)
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AA seq
353 aa
AA seq
DB search
MSTRNIVHAQLLEADDLDVDCAPYSNSSEVLKKSTHHFLSDKCDSVCDSGVDLESVGSAY
GSMHSFHERRSETELIEKRMGGLCLESQKYTSITEDAKCSIDDGYKSYQSDESCVQIAPS
KISPEVLELYNQDIDGDSQLHMAIINLMVPIALYIIQQAPNRDWLNLPNNMLQTPLHLAV
MTRLPQVVKALIDGGADIEARDSKGDTPLHIACREGFDDIAQILLNSTNQNVSQDLEARN
YDGQTCLHLAAENTHLPIIRLLVLSGADLNTQDGKSGKTVIHYAAESGNTLLLEFLLQYP
SVNIQFRTYSGLTAIMLADGRGYNDIVYQLQKFGGLLENVAFEESSDSDEDMS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacaaggaacattgttcatgctcagcttttggaggcagatgatttggatgttgat
tgtgcaccatattcaaactcgagcgaagttctgaaaaagtctacacaccattttctatcg
gacaaatgcgattcagtttgtgacagcggggtcgatcttgaaagtgttgggagtgcatat
ggatctatgcattctttccacgagaggagaagcgagaccgagttaattgaaaagaggatg
ggaggactatgtttagaatcccagaagtataccagtattacagaagatgcaaagtgttca
attgatgatggttataaaagctaccaaagtgacgaatcgtgcgttcaaattgcaccctcc
aaaatatcacctgaagtgttggaactatacaatcaagacattgatggtgattcgcagcta
cacatggcaatcatcaatctgatggtccccattgctctctacatcattcagcaagcccct
aatagggactggttgaacctccccaacaatatgctgcagacccccctccacctggctgtg
atgaccagactgccccaggtagtaaaggctttgattgatgggggagccgatattgaagca
agggattctaaaggtgacactcccctccacattgcatgtagagaaggcttcgatgatatt
gcccagatcttactgaattccaccaaccaaaatgtttcgcaggatttggaagctcgcaat
tatgatgggcaaacttgtttgcacttagcagcggaaaacacccatcttcccatcattcgt
ttattggtgctgtcaggagcagacctcaatacacaggatggaaagagcggcaaaactgtc
atccactatgcagcagagtcgggaaatacccttcttttggaattccttttgcagtatccc
agtgttaacattcagtttcgtacatacagtgggctgacagctataatgttggctgatggc
aggggttacaacgacattgtctaccagttacagaaatttgggggcttactggagaatgtt
gctttcgaagaatcttcggacagcgatgaagatatgagttga
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integrated database retrieval system