Crassostrea virginica (eastern oyster): 111131126
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Entry
111131126 CDS
T09197
Name
(RefSeq) homeobox protein orthopedia-like
KO
K24901
homeobox protein orthopedia
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvn03000
]
111131126
Transcription factors [BR:
cvn03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
111131126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
111131126
NCBI-ProteinID:
XP_022334210
UniProt:
A0A8B8E1V3
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Position
4:complement(4405196..4411971)
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AA seq
285 aa
AA seq
DB search
MDLGGTALMPMARSFGGNPQGSAIKTELGNVTNTVRPIPSQSPSRDSDSGGEERLGDGDK
PSKQKRHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWK
KRKKTTNVFRTPGALLPNPGMSPFGTMNDAFCTFRPTDSRWSSIPSMTSSMNGNPLALTP
SLPRQTPLGQSFGSQVPFNGLQEVCSTIASNISMPNNGASLHSTCFGVPSVSCASPISAN
SNSPPISHQQVNCGMQEVEDAWRGTSIAELRRKALAHTATLTGYR
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggatttgggtggcacagcattgatgcccatggccaggagcttcggaggcaacccacaa
ggctcggccattaagacggaactggggaacgtcacaaacaccgtgcgaccgattccttcc
caaagtccctcccgggactctgacagtgggggagaggagagactgggggacggggacaag
ccctccaaacagaagaggcaccggacaagattcacccccgcacagctgaatgaactggaa
agaagcttcgcaaaaactcattacccagatattttcatgcgagaagaactggcgttaaga
ataggactcacggaatcccgagtgcaggtttggtttcaaaacagacgcgcaaaatggaaa
aagaggaagaagacgaccaatgtattccgaacgcccggtgctctcctgcctaatccagga
atgtcgccattcggaaccatgaatgatgctttctgcacgtttcgtccaactgactctcgc
tggtcctcgattccaagtatgacgtcatcaatgaacggaaatcctcttgccctaacaccc
tccttgcctcgtcaaacacccctgggccagtcctttggctcacaagtaccctttaatggt
cttcaggaagtttgctctacaattgcaagcaacatttcaatgccaaataatggtgcttca
ttacacagcacgtgttttggcgtcccgtctgttagttgtgcttctccgatatcggcaaat
tccaactctcctccgatttctcatcagcaagtaaattgtggtatgcaggaagtggaagat
gcgtggcggggaaccagtatagcagaactgcgcagaaaggctttggcgcatacagcaaca
cttacaggatataggtga
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integrated database retrieval system
