KEGG   Crassostrea virginica (eastern oyster): 111131208
Entry
111131208         CDS       T09197                                 
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat-containing protein 41-like
  KO
K23610  WD repeat-containing protein 41
Organism
cvn  Crassostrea virginica (eastern oyster)
Pathway
cvn04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:cvn00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    111131208
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cvn04131]
    111131208
Membrane trafficking [BR:cvn04131]
 Autophagy
  Other autophagy associated proteins
   Rab associated proteins
    111131208
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_TEP1_2nd WDR55 WD40_CDC20-Fz WD40_WDHD1_1st WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 EIF3I WDR90_beta-prop_4th Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 NBCH_WD40 Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_DCAF12 ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Ge1_WD40 Beta-prop_Nup120_160 Beta-prop_DCAF4 WD40_CFAP43
Other DBs
NCBI-GeneID: 111131208
NCBI-ProteinID: XP_022334336
UniProt: A0A8B8E4S2
LinkDB
Position
4:complement(36804121..36810946)
AA seq 448 aa
MSVWQKIWRKTDQQKDEGKEIVEEIDGEQTCNPYTELYFLQHHTDIVRHLMVIDDRKCIS
AGDDGCVVVWDIQLCMKLAYFEAHSRPITCLLSIEGKKKDSILLITGSSDKHIKVWDIDQ
GKCVQDIVDHGTSVKCLLPVLDNMFVSAGEALHLWAEDGILLDTFSMEAQEADITLLIST
NMKNERFVTACDKELAVYSIKDQLDVNETSYKICLLKKLPXHIEAIRALVPVSDKLFASG
SLDGTILLWSSETFIPVKKLNTMADYKGKANIXPYSVQYIACENQKYLLAAIGCGFALFD
TISNTLLCQKLNAHYSKVTQLTFVCDGLLLATCSEDGSIRLWGQRSHNPGEQLVVKASMG
LSPIERFLDINFGQLHHSRSPEHFPEPALLGECLGHCGSVMRIINHGLEGILSCGADHFV
IAWKNSELQKMKRNQLIQEKVLNPSGIV
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgtcagtgtggcaaaaaatatggaggaaaacagaccagcagaaggatgaaggaaaagag
attgttgaggagattgatggagagcagacatgtaatccctacaccgaattatacttcttg
cagcaccatacagatatagtgcgacatctcatggtcattgacgatcgaaagtgtatttct
gcaggagatgatggttgtgtagttgtatgggacatacagctatgtatgaaattggcatat
tttgaagcccattccagacctatcacatgcctattgtctatagaaggaaagaagaaagat
tcaattctactgattacagggtcatctgataaacacatcaaggtttgggacattgaccaa
ggcaaatgtgtacaagacattgtggaccatgggacatctgtcaagtgcctgctcccagtc
ttggacaacatgtttgtgtcggcaggggaggccctgcatctgtgggcagaggacggcatc
cttctggacacgtttagcatggaggcacaagaagctgacataacattgttgatatctaca
aacatgaaaaatgaaagatttgttacagcttgcgacaaagaactagctgtgtattccatc
aaagatcaactagatgtgaatgaaacaagctacaagatttgtttgttgaagaagctccct
ncacacattgaagctataagagcattagtacctgtttcagataaattgtttgccagtggt
tcattggatggtacaatactgctgtggtcatcagaaacatttattccagttaagaagctg
aacaccatggccgactacaaagggaaggccaacatantaccctacagtgttcagtacatc
gcttgtgaaaaccagaaatatctactggcagcaattggttgtggatttgctttatttgat
acaatctcaaacacgctcctgtgtcaaaaactgaatgcacattactccaaggtcacccaa
ttgacctttgtatgtgatggcttgctactggccacatgctctgaggatggcagtatccgg
ctgtggggtcaaaggtcacacaaccctggggaacagctggtagtgaaggcttctatggga
cttagcccaatagagaggtttctggacatcaactttggtcagttacatcacagtagaagc
cctgagcactttcctgagcccgccttgttaggggaatgtctgggacactgtggctctgta
atgaggatcattaaccatggcttagagggaatattgtcctgtggagcagatcattttgtt
attgcatggaagaacagtgaattacaaaaaatgaagaggaaccaattgattcaggagaaa
gtgttgaatccaagtggcattgtttga

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