KEGG   Crassostrea virginica (eastern oyster): 111131216
Entry
111131216         CDS       T09197                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
cvn  Crassostrea virginica (eastern oyster)
Pathway
cvn03010  Ribosome
cvn04120  Ubiquitin mediated proteolysis
cvn04137  Mitophagy - animal
cvn04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:cvn00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    111131216
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    111131216
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    111131216
   04137 Mitophagy - animal
    111131216
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:cvn03011]
    111131216
   04121 Ubiquitin system [BR:cvn04121]
    111131216
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cvn04147]
    111131216
Ribosome [BR:cvn03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    111131216
  Archaea
    111131216
Ubiquitin system [BR:cvn04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   111131216
Exosome [BR:cvn04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   111131216
  Exosomal proteins of colorectal cancer cells
   111131216
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 DUF2604 Dsc3_N TBK1_ULD Ubiquitin_5 OTU1_UBXL
Other DBs
NCBI-GeneID: 111131216
NCBI-ProteinID: XP_022334344
UniProt: A0A8B8E2A5
LinkDB
Position
4:34693847..34698833
AA seq 156 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKRKKKNYTTPKKNKHKKKKVKLAVLKYYKVDENGKITRLRRE
CPNEECGAGVFMASHFDRQYCGKCCLTYVFNKPEEK
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcagatctttgttaaaaccctcacgggtaaaacaattaccctagaggttgagcctagc
gacactatcgagaatgtcaaagccaagattcaggacaaagaaggaattccccctgatcaa
cagaggctgatctttgccggtaaacagctggaggatggtcgcaccctctctgactacaac
atccagaaggagtccaccctccatctggtcctccgcctgaggggaggggccaagaagagg
aagaagaagaactacaccacccccaaaaagaacaagcacaagaagaagaaggtcaagctg
gccgtcctcaagtactacaaggtggatgagaacggaaagatcacacgtctgaggagggag
tgtcccaatgaggaatgtggagcaggtgtcttcatggcatcccactttgacagacagtac
tgtgggaagtgctgtctcacctatgtattcaataaaccagaggaaaaataa

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