Crassostrea virginica (eastern oyster): 111131230
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Entry
111131230 CDS
T09197
Name
(RefSeq) elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111131230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cvn03009
]
111131230
Ribosome biogenesis [BR:
cvn03009
]
Eukaryotic type
Pre-60S particles
GTPases
111131230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
GTP_EFTU_D2
EF-G_D2
ADDB_N
MMR_HSR1
EFG_IV
SSXT
Motif
Other DBs
NCBI-GeneID:
111131230
NCBI-ProteinID:
XP_022334366
UniProt:
A0A8B8E4U9
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All DBs
Position
4:complement(14715130..14729932)
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AA seq
1118 aa
AA seq
DB search
MKGATPELLSLLQRRPANIRNICILAHVDHGKTTLADALVASNGIISQRMAGKLRYMDSR
EDEQLRGITMKSSAISLIYNYNKEEFLINLIDSPGHVDFSSEVSTAVRLCEGAIVVVDVV
EGVCPQTHAVLRQAFLENIRPVLVLNKIDRLIIELKMEPMEAFYHLQQMLEQVNLVTNEL
FTVEAMEKSAEDNDTENGDPSQIHDWTNIDDEESSRNIYFSPDQGNVIFASAYDGWGFSI
KDFAVLYASKLGINQDVLQRTLWGDFFLNTKTKRIMKGAQSKAKKPLFVQFILENLWSVY
DTIYTRRDKEKTEKIVSSLGLKILPRDMRHSDGRVQLQAICSQWLPVSNAVLSVVVSKLP
SPLSMSEERVEKLMCSQMRKFDSLPKETQDLKQSFIHCSASEDSPVIIFVSKMLPVDKKM
LPQNRQRPLTEAEIAEKRRKAKEKLAERAAVRSQGETTEMTALKEEISEVPLPENDAEKK
EESDFVFVAFARVFSGTVRKGQKLYVLGPKHDPSLMLKKLQSGEEIKEASTLQDLAHDNH
VTCVTISDLYVFMGRELEEMDHIPAGNILGIGGLENQILKSATVSSSLMCPAFCDLYFDA
APIVRVAIEPGHTRDMQKLVEGLRLLNQADPCVQVLVQETGEHVIITAGEVHLQRCVDDL
KKRYAKTDINVSSPIVPFRETIVPPPKMDMVNEAISEQRQISKKDSEDEEVIEPGLVEVS
TINGRCTLRIRSVPLPEDVTRLLEENQTLIKTMGQISKSHGKGRGEGLEELQQSVIDSIN
EFKSQLSKAFKKSGKMWKDAENQLWSFGPKRVGPNVLLNRVEHYDRANVWNCVETKQQEL
KLRQYDNSIISGFQIATLAGPLCEEPLRGVCYIIEEWNYIRSSHSISYDEEVQKRGKDID
SKNSCDNSVLVNPNEDVSSANGSDTVKDKDSNESSDSENETVPSPHRQSTGHSHMSGQLI
YCVKEGCRKAFQTQPQRLMAAMYKCNIQCTAEVLGKLCGVLGKRFGRVIEDTMKEGSQIF
NIKAVLPVVESFGFAEDVRKKTSGLASPQLMFSHWEVIDVDPFWVPTTEEEYTHFGEKAD
SENRARQYMNQVRKRKGLKVDEKIVEHAEKQRTLTKMK
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgaagggagcaacaccagagctgctttctctgcttcaacgaagaccagctaacatacgt
aacatctgtatattggctcatgttgatcatgggaagaccactttggcagacgctctggtg
gccagtaatggcatcatatcacagagaatggctggaaaacttcgatatatggacagccga
gaggatgaacagttgcggggaattacaatgaaatcaagtgctatatcattgatttataac
tataataaggaagagttcctgattaacctgattgactccccgggacatgtggacttctcc
agcgaggtgtccaccgcagttcgtctgtgtgagggtgccattgtggtggtggacgtggta
gagggggtgtgtccacaaacacatgcagttctcagacaagcgttcttggagaacattagg
ccagtgctggtcctgaataagattgaccggttgatcattgaactcaaaatggagccaatg
gaagccttctatcacctacagcagatgttagaacaggtcaacttagtgactaatgaactg
tttacagtagaagccatggagaaatctgcagaggacaatgatactgaaaatggggatccc
tcacagattcatgactggacaaatattgatgatgaggaaagcagtagaaacatatacttc
tccccagatcaaggaaacgtgatttttgccagtgcctatgatggatggggatttagtata
aaggactttgctgtgttgtatgccagtaagcttgggatcaatcaagatgtcttgcagcgg
acattgtggggggatttcttcctaaacaccaaaactaaaagaatcatgaaaggagctcag
agcaaagctaagaagccactctttgtccagtttattttggagaacttgtggtcagtgtat
gacactatatacaccagaagagacaaggaaaaaacagagaaaattgtaagctcccttgga
ttaaagattctacctcgggatatgcgacactcggatgggcgggtccagctacaagccatc
tgtagccaatggctgccggtctctaatgctgttctgagtgtggtggtcagtaagctgcct
tccccactctccatgtcggaggagagggtggagaaactgatgtgctcacagatgagaaag
tttgactcgctgcccaaagaaactcaggacctcaaacagtctttcatccactgctcagcc
tctgaagactcaccagtcattatatttgtgtccaaaatgttgcctgtggacaagaagatg
cttcctcaaaacagacagagacctttgactgaggctgaaattgcagaaaaacgtcggaag
gccaaggaaaaattggcggaaagagcagctgtcagatcgcaaggggagacaactgagatg
acagctctaaaggaagagatctctgaagtacccctcccagagaatgatgcagaaaagaaa
gaggagtcagactttgtgtttgtggcgtttgcacgggtttttagtggaacagttcgaaag
ggacagaagctgtacgtgttgggacccaaacatgacccatctcttatgttgaaaaaactc
caaagtggtgaagaaattaaagaagcgagcactcttcaggatctggcacatgataatcac
gtgacatgtgtcaccattagtgatctatatgtgtttatgggaagggagcttgaagagatg
gatcatatacctgcaggcaatatattaggaattggaggcttggaaaaccagatcctgaag
tctgccacagtgtctagttctctgatgtgtcctgccttctgtgacctgtactttgatgct
gctcctatagtcagggtagcaattgaacccggccacactcgtgacatgcagaagttggtg
gagggcctgaggttgttgaaccaagctgatccctgtgttcaggttctggttcaggaaaca
ggtgaacatgtgatcatcacagcaggagaggttcatctacagagatgtgtggatgatcta
aagaaaaggtatgccaagacggacattaatgtgtcctcacccattgtcccattcagagaa
accattgtccctccccccaaaatggacatggtgaatgaggccatctcggaacagaggcag
atcagcaagaaagattctgaagatgaggaggtgatagaaccaggtctggtggaggtctcg
acgataaacgggaggtgcaccctgaggatccgatccgtccccctcccagaggatgtcacc
agactcctggaggagaatcagactctgatcaaaaccatgggacaaatctccaagtctcac
ggtaaaggtcggggggaggggctggaggaactccaacagtctgtgatcgactccattaat
gaattcaaaagtcagctcagcaaggcgtttaagaagagtggaaaaatgtggaaagatgcg
gaaaatcagttgtggtcctttggtcccaagagggtaggaccaaacgtgcttctgaatcga
gtggagcattatgacagagcaaatgtgtggaactgtgtggaaaccaaacagcaggaattg
aaactaagacagtacgacaacagcataatcagtggttttcagattgctacccttgctggg
cctctttgtgaggagcctctaaggggtgtctgctacattatagaggaatggaactatata
cgaagtagtcactccatttcttatgatgaagaggtgcaaaaaaggggcaaggacattgac
tcaaaaaattcctgtgataattctgtgttggtaaatccaaatgaggacgtgtcatctgcc
aatggaagtgacactgtgaaagacaaggacagcaatgagtcctctgacagtgaaaatgag
actgtaccctcaccccacagacagtcaacggggcacagtcacatgtctggtcagctgatc
tactgtgtcaaagagggctgtcgcaaagcattccagacacagcctcaaagactcatggct
gccatgtataagtgtaatattcagtgcacagcagaagttttaggaaagctgtgtggtgtt
ctgggtaagaggttcggccgggtgattgaggacacaatgaaggaaggatctcagattttc
aacattaaggctgttctgccggtggtagagagttttggatttgctgaggacgtgaggaag
aagacaagcggtctagccagtcctcaactcatgttcagtcattgggaggtgattgatgta
gatcccttttgggtccctaccacagaagaggagtacactcattttggggagaaggcagac
tcggaaaatcgggcgcggcagtacatgaaccaagtccgtaaacggaagggactcaaagtc
gacgaaaaaatcgtggaacatgccgagaagcagagaacgcttacaaaaatgaaatga
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