Crassostrea virginica (eastern oyster): 111131470
Help
Entry
111131470 CDS
T09197
Name
(RefSeq) AP-5 complex subunit beta-1-like
KO
K19022
AP-5 complex subunit beta-1
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvn03400
]
111131470
DNA repair and recombination proteins [BR:
cvn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
111131470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_N
ALC
Motif
Other DBs
NCBI-GeneID:
111131470
NCBI-ProteinID:
XP_022334718
UniProt:
A0A8B8E4T6
LinkDB
All DBs
Position
4:14449265..14482618
Genome browser
AA seq
868 aa
AA seq
DB search
MSSWEETLCRSRHLVSSGAFDKLFGDKYFIFDAIKLLYTDTADEKTKLEQLILIEEFSQQ
AGVQTSNVDQVVETLLDVFHQLTRQGRDGNVSCQILTTLTTILVLYEQLETETCQSVVQT
LLAIVCNGINVTDNRPLRSTACQCLIQLEDVRPGLLWREKDSLIKLMKQERTSVYEDYVL
LVTQILQNRISAPEDITSKEKDVDRVITPDSLEYRQIVSQIMDNISLFSQGGLWHIVLDL
VNIVQNYHEISATIFKPMMLHHMSTSDTALLHLVVFIQSEFEKEVLTDGEEKQLRNRILA
GLNHPSLTPAQRLFYCHWIESLTNVTLDDQEACIGIPDDQPLVFFPSAFDPIDCQLAKLE
LLNFCFPSLVKEENGQAAALLLGGVGYLHKLVWHTGGQRAARTLFRALFSMYRRHCSKSF
SQDINRFLRGLISGFPFFIPHALDFIESLREMTPDSPVYLEILQLLHHQVINTPQQQAAE
YCYFYLQVLKRASLQPEIAPQGTVRFLSYLAENSLSVDEGSWRLGIAILSVCQNILVCHG
TRELYVEIGDLLFYLMTHYEDTDVRDKARFYYMLITSSTDEKISMIIQPTTDSQSFHHEA
ISTLLPNHKAKGHSNVKQLEKSFFCLEKLKVQAETFVDIQCIDEDHTASLICDLKTYYSK
LSKYKTVLKTVHRISMTKGPEEVLALCIYFEEDSNCQPLKEIRLSKIKAEENYELNLDIV
PRIPLATKIITRCEFVNDEQTYRGQLADIVVSTEDLIIPLPIEIVTPANREEDFQTLWKW
LAEDSLQEGSNCLESVTTVQKTLGDFVSCVRPCLKRCQISANADYATYGIFLPPSYHLLM
KASSQQDYVVLRSITDFYQSLLFIRDVI
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgtgggaggaaactttgtgtagaagcaggcatttagtttcatctggagccttt
gacaaactttttggtgacaagtattttatttttgatgccattaagctgttatatacagat
acagctgatgaaaaaacaaaattggaacagttgattctcattgaagaatttagtcaacag
gccggtgtacagacttcaaatgttgaccaggttgtggagaccctgctggatgtgtttcac
cagttgacgaggcagggcagagatggcaatgtctcctgtcagattctcaccaccctgaca
acaatacttgtactctatgaacagctggaaacagagacctgtcagtcggttgtgcagaca
cttcttgcaatagtttgtaatggcatcaatgttacagataatcggccactacgctccact
gcctgtcagtgtttgatacaacttgaggatgtcagaccagggttgctttggagggagaag
gactctctgataaagctgatgaagcaggagaggaccagtgtgtacgaggactacgtcctg
ttagtgacacagattctccagaacagaatcagtgctcctgaagatattacgtccaaagaa
aaggatgtggacagagttattacccctgattccttggagtaccgacagattgtttcgcag
ataatggacaacatcagtctattctctcagggaggactctggcacattgtgcttgacctg
gtcaacattgtacagaattatcatgagatttctgcaactatattcaagccaatgatgctt
caccacatgtcgacatctgatacagcattgctccatttggtggtatttatacagagtgag
tttgagaaggaggttttgacggatggggaggagaagcagctgaggaataggatcctggcc
gggctgaaccacccctccctcaccccagcccagaggctcttctactgccactggatagaa
agcctaaccaatgtgacactggatgatcaggaagcttgcattggaatccctgatgaccag
cccctggttttcttccccagtgcttttgacccaattgactgtcaacttgccaagctagaa
cttctcaatttctgtttcccttccttagttaaagaggaaaacggtcaggctgcagcctta
ttacttggaggtgtgggttacctgcataaactggtctggcacaccggaggtcaaagggca
gccagaactctgttccgagcattgttctccatgtatcgacgtcactgtagcaagtctttc
tcccaagacatcaacaggtttctgcgtggattgatatctggtttcccattctttattccg
catgctttggatttcattgagagtctacgagagatgacacctgacagtcctgtgtatctt
gagatattacaacttcttcatcatcaagtgataaatactcctcagcagcaagctgcagag
tactgctatttctacctccaagtactgaagagggcttccctacagccagagattgcaccc
cagggtactgtgcgattcctctcctacctcgctgagaactccctgagtgtagacgaagga
agctggaggctaggaatcgccatcttatccgtctgtcagaacatcctggtttgccacgga
acaagagagttgtatgttgagatcggagacttgttattttaccttatgacacactatgaa
gacactgatgttcgggataaagcccgattctattacatgttaattacgtcatccacagat
gaaaagatatcaatgattatacaacctacaacggactcccagtcatttcatcacgaagcc
atttccactttattacctaaccataaagctaagggacatagcaatgttaaacaactggaa
aagtccttcttttgtttggagaaattgaaggttcaagcagaaacttttgttgatattcaa
tgtattgatgaggatcatacagcctcattaatttgtgatcttaagacttactacagcaaa
ctcagcaaatacaaaacagtattaaaaactgtacacagaatctctatgactaagggtcct
gaggaggtcttggctctgtgtatatactttgaagaagattccaattgtcagcccttaaaa
gaaataagattatctaaaataaaggcagaagaaaattatgaattaaatcttgacattgtt
ccaaggataccacttgcaacaaaaattattacaagatgtgagtttgtgaatgatgagcaa
acctatcgaggtcagttagcggacattgtagtgtccacagaagaccttattatacccctt
ccaatagagattgtgacccctgcgaacagagaggaagatttccaaaccctgtggaaatgg
ctggcagaggattccttacaagaaggttcaaactgcctggaatccgtgacaactgtacag
aaaaccctaggagactttgtctcgtgtgtacgaccttgtctgaagcgctgtcagatctca
gcaaatgcagattatgcgacatacggaatatttttgcctccaagttaccatctgttaatg
aaagcgtcatcacagcaggactacgttgttctgagatctatcacggacttctaccagagt
ttgctgtttatcagagacgttatttaa
DBGET
integrated database retrieval system