Crassostrea virginica (eastern oyster): 111131750
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Entry
111131750 CDS
T09197
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial-like
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111131750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvn03019
]
111131750
03016 Transfer RNA biogenesis [BR:
cvn03016
]
111131750
Enzymes [BR:
cvn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
111131750
Messenger RNA biogenesis [BR:
cvn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
111131750
Transfer RNA biogenesis [BR:
cvn03016
]
Prokaryotic type
tRNA degradation factors
111131750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
Motif
Other DBs
NCBI-GeneID:
111131750
NCBI-ProteinID:
XP_022335129
UniProt:
A0A8B8E606
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All DBs
Position
4:complement(17489757..17503262)
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AA seq
747 aa
AA seq
DB search
MMFNLLLFCKKCPNIKRWDLIKRLQSTAASATIKVGERDLTFETGRLAKFADGAVVVKQG
ETSVLVTVVSKALQKPSSFLPLTVDYRLKAAAAGRIPMNFYRRERGITDNEILTSRVIDR
SIRPLFPEDCQRELQVICNVLAVDGENDPAVLAINAASFATALSKTPWNGPVGAVRVGYL
DKEFVINPLRHELEKSDINLIVTSSLQGIVMLEGGANNVNYDLMKQAINIGQQESMKVIK
CIQDFIEKSSIFKHTASTTKNFGDALQQEIMTEVKKICGNEFLNILSNYSHDKFSRDAAI
KNSMKTATQALTGIYPVESSEIFDSAVQKCFKEVFRSKILDTSIRCDGRKLTDLRNISCS
VDVLKPLHGSSLFQRGQTQVLSTMAYDSLDMSLKYDPVSQLISGAKEKNFMLHYEFPPYA
TNEIGRPGAALARREIGHGALAERGLRPIIPENYPFTLRVTAEVLESNGSSSMASVCGGS
LALMDAGVPVKEAAAGVAIGLVSRSNNQGKITEYRVLTDLLGIEDYCGDMDFKMAGTRHG
ITALQADIKLEGLPLNIVNEAINAGKRGISQILDIMDNVLKSPRTNKTNTPVTEKFVINP
KKRIRIMGVGGSKIRELAQKTGVQMSILDESTMELFAPDKTALQEGKELLNAWLEEKPAP
NMEFGAIYTVKILEIDMSGALVEIHPSLEPVFIHRRQLDLRSVQDARVLGFKPGDEIQVK
YFGNDPISGQVRLSRRLLLTPASQAFQ
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttaatttactgttattctgtaagaaatgtcctaacattaaacgatgggacctg
attaagcggctgcagtcaactgctgcttctgcaacgatcaaagttggagaaagagattta
acttttgagacaggaaggttggcaaaatttgcagatggtgctgttgttgtcaaacaaggg
gagacaagtgttctggtcacagtcgtcagcaaggccttgcagaagcccagttcctttctg
cctctcacggttgattaccgattaaaggctgcggcagcaggccgcattcctatgaacttt
taccgacgagagaggggcatcactgataatgaaatcctcaccagccgtgtaatagacaga
tccatccgaccactttttcctgaggattgtcaaagagaacttcaggttatttgtaatgtc
ctggcggtagatggagagaatgacccggccgtccttgccatcaacgcagcctcctttgcc
actgctctgtccaaaactccctggaatggacctgtgggagcagtgagggtcggctatctg
gataaagagtttgtgataaatccgctcagacatgagttagagaaaagtgatattaaccta
atcgtcacatccagtctgcagggcatagtgatgctggagggcggggctaacaatgtgaac
tatgacctgatgaagcaagccatcaatataggtcagcaggaatccatgaaagtgatcaaa
tgtatccaagactttatagagaaaagctcaatatttaaacacaccgcttcgaccacaaag
aattttggagatgccctacaacaagaaataatgacagaggtgaaaaagatctgtggaaat
gaattccttaatatcttatccaactactcccatgacaagttttcaagagatgctgcaata
aagaattcaatgaagactgcaactcaagcattaacaggaatttatcctgttgaatccagc
gagatatttgactcagcagttcagaagtgctttaaagaggtgttcagaagcaaaattctg
gatacaagcataaggtgtgatgggcgaaaactaactgacctccggaacattagctgtagt
gtggacgtcctgaagcccctccatgggtcctccctgttccagagagggcagacacaggtt
ctctcaaccatggcctatgactctctggacatgtctctgaaatacgacccggtatcacaa
ctcatcagtggtgctaaagagaagaattttatgttacactatgagttccctccatatgct
acaaatgaaataggaaggcctggtgctgctctggccagaagagaaattggacatggtgct
ctggctgagagaggactgagacccatcatccccgaaaactaccccttcaccctgcgcgtc
actgcagaagtccttgaatccaatggctcctcctctatggcctcggtgtgcgggggtagt
ctggcgctgatggatgcgggcgtcccagtgaaagaggcagcagcgggggtggccattggc
cttgtgtccaggtccaacaaccaggggaagatcaccgagtatcgagttcttacagatctt
ctgggtatagaggattactgtggggacatggatttcaaaatggcgggaaccagacatgga
atcactgctcttcaagctgatataaaattagagggtctacctttgaatattgtgaatgaa
gccattaatgctggaaaacgtggtattagccagattctggacataatggacaatgtgtta
aaatctcctcgaacaaacaaaacaaatacccctgttacagaaaagtttgtcattaacccc
aaaaagagaatccgcattatgggagtcgggggctcaaagatacgagaattggcacaaaaa
acaggggttcagatgtcaatactggatgaaagcacaatggaactgttcgctccagacaaa
acagcattgcaagaagggaaggagctattaaatgcttggcttgaagagaagcctgctccc
aacatggaatttggggcaatctacacagtgaaaatactggaaattgatatgtccggggcc
ttggtagaaatccatcccagtctagaaccagtgttcatacacagaaggcagctggatctc
cgatcggttcaggatgcccgagtcttggggttcaagcctggggacgaaatccaagtgaaa
tattttggcaatgatccaattagtggtcaggtgcgcctgtcccggcggcttctcctcacc
cccgccagccaagccttccagtga
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