Crassostrea virginica (eastern oyster): 111131784
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Entry
111131784 CDS
T09197
Name
(RefSeq) caprin-1-like isoform X1
KO
K18743
caprin-1
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvn03019
]
111131784
Messenger RNA biogenesis [BR:
cvn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
111131784
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Gene cluster
GFIT
Motif
Pfam:
Caprin-1_dimer
Motif
Other DBs
NCBI-GeneID:
111131784
NCBI-ProteinID:
XP_022335198
UniProt:
A0A8B8E6B2
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Position
1:complement(63718533..63726706)
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AA seq
611 aa
AA seq
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MPAASTKQETKTSPEVVDAMKQVLIVMDKKVRNLEKRKGKLDGYREKKDSGATLEKDQQL
AIEKYGEVMQNLEFARELQKQFTTLAQETDRSVKKQAKKEKVERQTWEQKRIGDILRYQN
LLDAMGAEKVRNDFQTGKHGAVVLTEENLTQLDELYKLLSPSREGAPNYTEELTKASDHF
ANLLDGKDKPVVGTTYKDLKVLIDLIDDCGYFEHAMQEEEGQETEYVVVNTTEIPKPDSA
EVQASLPPEQTEQSIEQSNTATPSNNEAQLESMREADSFFSQKSAATAAQTTPPHPQQQQ
QSNVPYTRQRPFQEIVSEVQGSCIFLQESTIDMESPHMDPAVVAVTSHPMGHSTTAPQSD
PTQISSQTYPNQGFPVGSQQKPSVLTQQTVNYSQTFSQSLPSDSLFQSTDNSASQMSQNV
LNQTVSDSTISQFEMPPQIPMPPGQDDRGQDVQSEKFQMNPNAEMFQSKMHSAFPVSDEN
PDGFSQQPQDDQQGDFGNGYNYRHRGGFRGGRGNRGGDRGGMSNGFTGRGRGSYGGSRGG
YQGYNNRDNYRGDYNSYNNGYQKRGGGPSRGGPRGGRGGPRGGFSSGGSAGGMRGGNKGG
FGKPQSQQQTA
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccgcctctacaaaacaagaaaccaagacctctccggaggttgtggatgcaatg
aagcaagtcttgattgtcatggacaaaaaagtccgcaatttggagaagagaaagggaaag
ctcgatggctaccgagagaagaaggactctggagcaacgctcgagaaggaccagcagctt
gccattgagaagtatggagaggtgatgcagaatctggaatttgcaagagaactgcagaag
cagtttaccacccttgctcaggagactgaccgctctgtgaagaagcaagctaagaaggag
aaagtggagcgccagacctgggagcagaagcggattggagatattctgagataccagaat
ctcctagacgctatgggagctgaaaaagttaggaacgattttcaaactggaaagcatggt
gcagttgtgttgactgaggaaaatttgacccagttggatgaactgtacaagctgttgagt
cccagtagagagggtgcccctaactacaccgaggagctgaccaaggcctcagaccacttt
gccaaccttctggacgggaaagacaagcctgtggtgggcaccacctataaggacctgaag
gttctcatcgatctgattgatgactgcggctactttgaacatgctatgcaagaagaagaa
gggcaggagactgagtatgtcgtcgtcaacacaacagaaatcccaaaacctgactcagca
gaggtgcaggcatctttaccaccagaacaaacagaacaatccattgaacaaagcaacaca
gcaactcccagcaacaatgaggcacaacttgaaagcatgagagaggcagattcttttttc
tcccaaaaatcagcagcaacagcagcacagacaactcctccccaccctcagcagcaacaa
caaagtaatgtaccctatacccgacaacgcccgtttcaagaaattgtgtcggaggttcaa
ggaagctgcatcttccttcaagaatctaccatcgacatggaatcaccccacatggatcca
gcagtggtagccgtgacctctcaccccatgggacactccaccaccgcccctcagtctgac
cccacccagatctcgtctcagacttaccccaatcaaggcttccctgtgggcagtcaacag
aagccctctgtcctaacacaacaaacagtgaactattcacaaacattctcacagtcctta
ccaagtgattccctgtttcaatccacggacaatagcgcttctcaaatgtctcagaatgtg
ttaaatcagacagtgagtgacagcacaatatctcagtttgaaatgcccccacagattccc
atgccacctggccaggatgataggggtcaagatgtccaatcagagaaattccaaatgaat
cccaatgctgaaatgtttcagtccaaaatgcattcagcattccccgtttcagacgaaaat
ccagatggcttctcgcagcagccacaagatgaccaacagggagatttcggtaatggatat
aactacagacatcgcggagggttccgagggggtcgtggcaatcgcggcggggatagaggg
ggcatgtccaacggcttcacagggaggggccgaggaagttacggaggaagcagaggtggt
tatcagggctataacaatcgtgacaattaccgtggcgactacaactcctacaacaatggt
taccagaagagaggaggaggaccctctaggggtggaccaaggggaggtcgagggggtcca
agaggaggattcagcagtggtggaagtgctggaggaatgcgtgggggtaacaaaggggga
ttcggtaaaccccaatcacagcaacagacagcatag
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