Crassostrea virginica (eastern oyster): 111132028
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Entry
111132028 CDS
T09197
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111132028
Membrane trafficking [BR:
cvn04131
]
Protein recycling
Others
EARP complex
111132028
Endosome - Golgi transport
Tethering complex
GARP complex
111132028
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
NBD94
GrpE
NPF
COG4_N
COG5_N
DUF7201
P22_AR_C
DUF677
Sec8_N
COG3_N
Syntaxin_2
CREPT
Snf7
DUF2009
MCPsignal
TMPIT
DUF7809
Laminin_II
DUF2570
Motif
Other DBs
NCBI-GeneID:
111132028
NCBI-ProteinID:
XP_022335366
UniProt:
A0A8B8E7E9
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Position
5:32257565..32271825
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AA seq
841 aa
AA seq
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MATVDDDDVLDDEQLDVLLKFPPDIQEVIDQVLPSDDPLDRADFNPIDYINTLFPTEQSL
VNIDDVVGKMRMKIRKLDDEIRSVVRGQTNAGEDGRLALEEAQKAIQELFSKIKEIKDKA
DKSEEMVKEITRDIKQLDHAKKNLTSSITTLNHLHMLVGGVDSLSTLSKRRQYGEVANLL
QGVQNVLEHFQKYMEIPQIKELADRVKSIQSDLGTQILADFEEAFQGAGAKYGPSNQRQL
KEACLVVDVLDSKVKKDLLAWFVKLQLAEYLVLFGEKEEVAWLDKIDRRYAWIKRTLVDF
EEKFGPLFPEAWEVSERICIEFCNITRSELSRMMGRRTHEIDVKLLLFAIQRTTNFEALI
AKRFTGATLNEKQTVKVSTPQTQSLNPFEESTNPFETESEEELSASEESKEHVKPAGSPF
TGIISKCFEQHLNIYIDSQDKNLSELINRFLEDIREQGTPRMETEESSNVLPSCADLFVF
YKKCMVQCSQLSTGQPMIELTRTFQKYLREYANRVLLNNLPKASNQSGGISSASGLIQSI
LKEGEVTKFTEEEQCRICSMLCTAEYCMETSQQLEEKLKEKVDPNLSGQIDLNSEQDTFH
NVISNCIQLLVQDLETACEPALTAMSKMSWSSVEAVGDQSGYISAITNHLKQNLPVIRDN
LASSRKFFTQFCLKFANSFIPKFISHLFKCKNISTVAAEQLLLDTHSLKTVLLDLPSLGS
QVVRKAPTSFTKIVVKGMTRAEHILKVVMSPHADQHRFVESYYRMLSDSDLNEFQKVLEM
KGLRRSEQSNILEIYRAKMPVSAATGSTHSDLTHGSSLQTQTSEQESSRIRKLERLIKKR
L
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atggctactgttgacgacgatgatgtgttagatgacgaacagttggatgttttactcaaa
tttccaccagatatacaagaagtgattgatcaggttcttccaagtgatgaccctttggat
cgagcagattttaatcccattgactacatcaatactctgtttcctacagagcagtcgcta
gtaaatattgatgatgtggtgggtaaaatgcgaatgaaaatcaggaaactggatgatgag
atacgatcagtggtacgtgggcagacaaatgcaggggaggatggtagactggctttggaa
gaagcccagaaagcaatacaagaactgttctctaagatcaaggagatcaaagacaaggca
gacaaatcagaggaaatggtgaaagagataacaagagacatcaaacaacttgatcatgct
aaaaagaatctgacaagctccattacaacactaaatcacctgcacatgttggttggaggc
gtggattccctctcaacattatcaaaaaggagacaatatggagaggttgcaaatttactc
caaggggttcagaatgtattggaacattttcaaaagtacatggaaataccacaaattaaa
gaactagctgatagagtcaaatctattcagtcagacttggggactcagattctggcagat
tttgaagaggctttccaaggagctggagcaaagtatggtccttcaaatcaaagacaatta
aaggaagcctgtttagttgttgatgttttggattccaaagttaaaaaggatctgctggct
tggtttgtcaaacttcaactggcagaatatctggtcctgtttggtgaaaaagaggaagtt
gcctggctggacaagatagacaggcgttatgcctggataaagagaactctggtggacttt
gaagagaaatttggccccctgtttccagaagcatgggaggtttcagagagaatatgtatt
gagttctgtaatattacaaggtcagagctatccagaatgatgggaagaagaacacatgag
attgatgtcaagctattgctctttgctattcaaagaactacaaattttgaagcattgatt
gcaaaaaggttcacaggtgcaacattaaatgaaaaacagactgtgaaagtttcaactccc
caaacacagtctttgaatccttttgaagagtctacaaatccatttgaaacagaatcggag
gaagaactgagtgcatccgaggaatcaaaggaacatgtgaagccagcaggatctccattc
actggaataatatcaaagtgttttgaacaacaccttaatatttacattgattcacaagac
aaaaatctatcagaattaatcaatcgatttctggaggatataagagagcagggtacacct
aggatggagactgaggagagcagcaatgtgctgcctagttgtgctgatctgtttgtgttc
tacaaaaagtgtatggtccaatgctcacaactcagcacaggccagcctatgattgaactt
accagaacattccaaaaatacctcagagaatatgccaatagagttcttcttaataattta
cccaaggcttcaaaccagagtggagggataagctcagcctctggcttaattcaaagcatc
ctgaaagaaggggaggttacaaagtttacggaggaagaacagtgtaggatctgtagtatg
ctatgtacagcagaatactgcatggagacaagtcaacaactggaagagaaattaaaagag
aaagttgacccaaatttgtctggtcagattgatttaaactcagagcaagacacattccac
aatgttatatccaattgtatacagttactggttcaggatcttgaaactgcttgtgagcct
gcacttactgcaatgagcaagatgtcctggtcttcagtggaggcagtgggggaccaaagt
ggttatatatctgccataacgaatcacctcaaacaaaacctaccagtcatcagggataat
ctagcttcatctcgcaaattctttacccagttctgtttaaagtttgccaattcctttatt
ccaaaattcatcagtcatctttttaaatgtaaaaacattagcacagtggctgcagagcag
ctgctgttagatacccactctctgaagactgttctgctagacttgccttcacttggatct
caggttgtaaggaaagctcctacaagttttacaaaaatagttgtgaaaggcatgacaaga
gcagagcatatcttaaaggttgtgatgtcacctcacgctgatcagcatagatttgtagag
agttactacagaatgcttagtgattcagatctgaatgaattccaaaaagtgcttgaaatg
aagggtttacgcaggagtgaacagagcaacattttagagatttatcgtgccaaaatgcct
gtgtcagcagcaacgggatcaacacacagtgacctaacacatggcagcagcctccaaact
caaacctctgaacaagaatctagtagaatacgaaaactggaacgactaatcaagaaaaga
ttgtga
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