Crassostrea virginica (eastern oyster): 111132107
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Entry
111132107 CDS
T09197
Name
(RefSeq) prominin-1-A-like isoform X1
KO
K06532
prominin 1
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvn04147
]
111132107
04090 CD molecules [BR:
cvn04090
]
111132107
Exosome [BR:
cvn04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
111132107
CD molecules [BR:
cvn04090
]
Proteins
111132107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
Tweety
Oxidored_q3
Na_Ca_ex
RPW8
RasGAP_C
ALIX_LYPXL_bnd
Motif
Other DBs
NCBI-GeneID:
111132107
NCBI-ProteinID:
XP_022335499
UniProt:
A0A8B8E5P4
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Position
5:complement(64716888..64807724)
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AA seq
918 aa
AA seq
DB search
MGRVSRTGPGLVILLTLFNWACCADPVLTPRTLTDAAGNSADDNSTIKWAPLPSFDPYKA
GDIEYDSSGLAPLNNFAKAFIRGGVFPYGVPWDLMEKAINGTLFPDLMANYMTYLKQFGG
YGACIIIGFLFFFIFPLIGLCFCCCRCCCSNCGGKMMQHHEDVRADCKRRTFAIIFFVLI
AFTSAGMICVYLSNDQMSNALNKYDSIFNNNLDDLTTYASNVVKETKYLMNNNFNFTTSV
ISRDLDNLGVVLGIPIRTALKTQGNLNTAISSANNLVTRVTQIASALTTLNTTLGDVKVK
ANILSSNLSTLKTDIETQLNNSGCPTTPGCPDLSNLNSGLDTNNFPDISGPLSSISSVES
QNLSAVIIQAQSEIDNIPERVTNETQTTVQGLKDMIANFSNVMDPLIKEVESVQDSISTN
GTIADLKKQVKDAVDLGKSYDKYRWYGGVGLTSIVLLVVLLQLLGLVLGTCSQNSNTRPT
DRGCVGSSAGNMLMASVGFVFIFSALLMLLTTITFMVGSPLDRFICEPLTDSTLAGLDTI
VNKIYKFQYGNTQGSYLGKMIFNNASISLTVSGVLRDCQAGRAAFKALKLDNLFDVTSLT
NFTKDLDIQAEVDKINIDLSTVKILTPSLTDQLNEMKNAINVNFTKFNEELSKSSTSQNM
SALADELDSFATSCNPGCNAATQTELRKLANRTRSIEVTELASLNAALTQLQTDLNTLES
TVNGTDTDVDNCLNNFNISEVFIQTNGSEVVKNEARNFANRILGIVTSFTEDALSALNNE
IGRCTPIWNLYNSVIVTSLCKYGVDTLNGFWFSLGWCIFFFIPSIIFATKLAKHYRRMSQ
LDDDDDFDKDGLQLPEVSSDDENHDLFHKHKHPLPWHNKVYPADEEWTGGSKAPFGSNKV
GHHDPSSGSNPPPYGSDW
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atggggagagtgtccaggaccgggccggggctggtcattctactgacactgtttaactgg
gcctgttgtgctgatcccgttctcactccgcgcacgctaactgatgccgcaggaaactcc
gcagacgataacagcaccatcaaatgggctcccttacccagttttgacccgtacaaagct
ggagacattgagtacgattcatcagggcttgccccactcaacaactttgccaaagcgttt
attcgtgggggagtgtttccttatggagttccttgggatttgatggagaaggcaataaat
ggaaccctgtttccagacctgatggccaactacatgacatacctgaagcagtttggggga
tatggagcctgtatcatcatcggttttctgttcttcttcatcttccccctgatcggactc
tgcttctgctgctgtcgatgttgctgtagtaactgtggagggaagatgatgcagcaccat
gaggatgtccgggctgactgtaagaggaggaccttcgccatcatcttctttgtactcatc
gccttcacaagtgccggaatgatatgtgtttacttgtcgaatgatcagatgtcaaatgcc
ctaaacaagtatgacagtatcttcaacaacaatctggatgacctgactacttatgcctca
aacgtagtaaaggaaacaaagtatttgatgaataacaactttaattttacgacctcggtc
atatccagagatcttgataatctgggagttgtactgggtatccccatcagaacagcactg
aaaacgcagggaaatttaaacacggccatttcatccgctaacaaccttgtcacaagagta
acccaaattgcctcggccttgacaaccttgaatacaaccttaggagatgtgaaggtgaag
gccaatatccttagttctaacctttcaactctgaagacagacatagagactcagctcaac
aattcaggctgtccgactacaccaggctgtcctgatctcagcaatctaaactccggactc
gataccaataattttcctgacataagtggacctctgtcctccatttcatcagtggaaagt
cagaatctgtcggccgtaatcattcaggctcaatctgaaatagacaacattccagaaaga
gtgaccaatgaaacgcaaaccacagtgcaagggttgaaggatatgatcgccaacttctcc
aatgtgatggatccacttataaaggaagtggaatctgtgcaagactccatctcaacaaat
gggactattgcagacttaaagaaacaagtgaaagatgcagtcgaccttggaaaatcttac
gacaaatacaggtggtacgggggcgttggtctgacctccattgttctccttgtggtcctc
ctacaactgctggggctggtcctaggaacctgcagccagaattccaacacgcgtcccaca
gacagaggatgtgtggggtcatccgcagggaacatgctcatggcgtctgtaggatttgtg
tttatcttctccgccctcctgatgttgctgaccaccatcacctttatggtggggagccct
cttgaccgctttatttgtgaacctctcactgactctaccctggctggcctggatacgatt
gtaaataaaatctacaagttccagtatggaaatacccagggatcctatcttggtaaaatg
atctttaacaatgccagcataagcctgacagtcagtggggttctgagagactgccaggca
ggaagggcagcattcaaagccctgaaactggataacttgtttgatgtcacctctctgact
aacttcactaaagatttagacattcaggccgaggtggataagattaacatagatcttagc
acagtgaagattctgactcccagccttacggatcaactcaatgaaatgaaaaacgccatc
aacgtcaactttaccaagttcaacgaagagttgagtaagtcatccacttctcagaacatg
tctgccttagcagatgagctagacagtttcgctacttcttgtaaccctggctgtaatgca
gctacccagactgaacttaggaaattggcaaacagaacccgatctattgaagttacagag
ctagcaagtttgaatgctgccttgacacagctgcaaacggacttgaacacattagagtca
acagtcaatgggactgatactgatgttgataactgcctcaataactttaacatctcagag
gtgtttattcagaccaatggatcagaagttgtgaaaaatgaagcccgaaattttgccaac
cgcattcttggcatcgtgacctccttcacagaagatgccctatctgctctgaacaacgag
attggaagatgtacccccatatggaacctgtacaactccgtcattgtgacgtcactctgt
aaatatggagtagacactttgaatggtttctggttttccctgggttggtgcatatttttc
tttatccccagcatcatatttgccacaaagctggcgaaacattatcgtcggatgtctcaa
ttggatgatgatgacgatttcgacaaggatggtttacaactaccagaagttagcagtgat
gatgaaaaccatgatttgttccataagcacaaacatccactaccttggcacaataaggtt
tacccagcggatgaagagtggaccggcggatctaaagctccatttggaagcaacaaagtg
ggccatcacgacccctcctctgggtctaacccccctccatacggctctgactggtaa
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