Crassostrea virginica (eastern oyster): 111132203
Help
Entry
111132203 CDS
T09197
Name
(RefSeq) homeobox protein caupolican-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvn03000
]
111132203
Transcription factors [BR:
cvn03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
111132203
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
111132203
NCBI-ProteinID:
XP_022335689
UniProt:
A0A8B8E7P2
LinkDB
All DBs
Position
5:complement(24772620..24777647)
Genome browser
AA seq
483 aa
AA seq
DB search
MSISQVVPFPLPSGTSAQMTKTPSPTSARSCCENGRPIMSDPHTGQTICSCQYNPALLGY
SRLAGLPEGVYGSPAYSAQGLVPFASEGSAFYSPLTNGPYDIKEATEAWRSLAAAQPGAC
FPYDPALSVYPYGPGYGGIDLNARRKNATRETTNTLKAWLYEHRKNPYPTKGEKIMLAII
TKMTLTQVSTWFANARRRLKKENKMTWSPRNRSEDDGDDDLDNDDDDDLLRKADNLTDKK
ESLHKIDDSAKDCEDRELGEKIISVDEDEDSNLSFEERDTRQRVDSLSSESESLSNKVLR
READAPSPNLSIGEDSRCSDLASPACSSVVTCSPKPLKTDTSSSQNQDNRSKIWSVTQFL
NNSSSSDDEKDEDVKKPIVTSSHRGPLVPHSASDLYYLTSTASHMMRTGRYGGFGPYPSA
LSLAHPPLSYPYILSSHAAAKSSLGGSHFPFSGPENLSKSAEKLVRSSSSLFSPARDIDV
VRP
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgtctatttctcaagttgttcctttccctttaccttctgggacttcagcacagatgacc
aaaacccctagtccgacctcagcccggagctgttgtgagaatggccgacccatcatgtct
gacccccacaccgggcagacaatctgctcctgccagtacaacccagccctcctgggctac
tccagactcgcaggtctccctgaaggggtctacggcagccccgcctactctgcccaagga
ctagtcccatttgcgtccgagggatcagccttttactcaccccttactaatggtccctac
gatatcaaagaagccaccgaggcttggaggagcctagcggcagcccaacccggcgcctgc
ttcccctacgaccccgccctctcagtgtacccctacggaccaggatatgggggaatcgat
cttaacgcacgtcgcaagaatgccacacgggaaaccactaataccctaaaagcctggtta
tatgaacacaggaaaaatccttaccctacgaagggcgaaaagatcatgctcgctatcatc
acaaaaatgacccttacccaagtctccacatggtttgcaaatgccagacgaagactgaaa
aaggaaaacaagatgacatggtctccccgtaatagatctgaagatgacggtgacgatgat
ttggacaatgacgacgatgatgatttgctgagaaaggctgacaatcttacagataaaaaa
gaatcccttcacaaaattgacgattcagcaaaagattgcgaagaccgtgaattaggcgag
aaaatcatcagcgtggacgaggatgaagattccaatctcagttttgaggagcgagacacg
cgacaaagggtagattcactgagttcggaaagcgagagtttatcgaataaagtgcttcga
agggaagcagatgcaccttctccaaatctcagcattggcgaggattcaagatgcagtgat
ttggcctcgcctgcatgttctagtgttgtcacgtgttcacccaaacctttaaaaactgac
accagttctagtcagaatcaggacaatcgatcgaaaatctggtctgtgacccagtttctc
aataattcatcctcatccgacgacgaaaaggacgaggatgtgaaaaaacccattgtgacg
tcatctcatcgaggcccactcgtcccccatagtgcttcggacttgtattacttaacctcc
acagctagtcacatgatgaggacgggtcgctatggcggattcggtccctaccccagtgct
ttgtctctggcccatccgccattgtcctatccctacatcctttcttctcatgccgcggca
aaaagctcgctgggcggatctcatttccctttctctggaccggagaacttatctaaatcg
gcagaaaagctcgtaagatcatctagttctttattttcccctgcaagagacattgatgtt
gtgcgtccatag
DBGET
integrated database retrieval system
