Crassostrea virginica (eastern oyster): 111132215
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Entry
111132215 CDS
T09197
Name
(RefSeq) deubiquitinating protein VCIP135-like
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cvn01002
]
111132215
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvn04121
]
111132215
Enzymes [BR:
cvn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
111132215
Peptidases and inhibitors [BR:
cvn01002
]
Cysteine peptidases
Family C64
111132215
Ubiquitin system [BR:
cvn04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
111132215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
DUF1351
SseC
DUF5817
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
111132215
NCBI-ProteinID:
XP_022335712
UniProt:
A0A8B8E549
LinkDB
All DBs
Position
1:complement(8794567..8818934)
Genome browser
AA seq
1189 aa
AA seq
DB search
MRKSSSGSSTDSYKVLYGTCPDEQCKAKLYFPSYDKSIECTNCGQRHEKSAIKNIAEVTN
PKVALHNILKNILLGNVKPKKGADNVKVLGLSNYVCKIVSPILTRYGMDKNTGTAKLLTE
LGQPAELNCGKILGDRAFLIEEENLDIIGYGKDRTGSAQYLADTLNVIKDANDNETRLVP
IHADGDGHCLVHAVSRALVGRELFWHALRVNLMHHLQSKLTTYKDLFCDFIDVDEWSAII
RECDPNFVPQDGEPLGLRNIHVFGLANVLRRPIILLDSISGIQSSGDYSGVFLPGLLSPD
ECKSKDGLLNKPLCIAWSSMGRNHYIPLVGIKGKEQPLLPRYMIQRAWGLPSIQIEKYID
FNEKGCCVIGGNKCLSDKYIRTLVSAMEKVYMDKYGVHPQLVADTHQYLYRTLGMVGVKM
EEVLKTTREAIQKKTLYRCLTCEAIMEYQLHEEWFRKGGNLYNLAVQTHGKLRSDKKYSF
PQQGAVCSYDKDQDKLVPDLSRCKPSTCTYCQGENVRLVKGDGTVCYENGDRTTTPTVTG
RCMCGFKHFWDGKEYDNLPEIFPISMEWNGEVVSEKVVWFQYESDITLNSNVFEVAQKLV
QKHFPGEFGSERLVQRVVDTILRHTAPKVKDQEGASTSVVSPYQDTDWSAEEPSKIILTG
HKQKTLHKEELTVSQKERMVKKQIETQAPKHQQKKSQEVAASGSKSSPSKPKVETAHRKE
TSPVPMETDKSCSQKKIRVATSDGRQVMLSVEGQVNFERLQDMIYKAVKVPPERQRIRIG
FPPKELKRPSGSDLHEPIPLAHGDKISLEIIPLTHSLSESGAESPRHHEHSALRHSSSSP
AKSKQSWSSFEEDIHTNSFEPLLQSFHEHAGNNSLDAAVASLTIMATLKGRDLWTHVQTM
PHLFSVGGLFYKQVERDLGLVDGKHCTLPTLPGKVFRYNQAESRLELCMEPYGHFSIEPD
VENKAKETRPIFGSRSDGSFSAFSGAVGQEKSKKTAFTGQGHSLKSMPDIERMPEDIPES
SHQHARHSHTLCNPYYHQESIAEEPEEQSVSEGVEKSKGEGDGNRPYQRIGPGYSVINPS
TVNQTNQSIQQFKDLAENIERTMHEDISKIDEEMEKLDEEEKKSRTFSVSSTNAPGNPEE
GGASQDSGEKPDNAGSVTKEESMEVAGSEEGRQPITSTARDSGQTMEDQ
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaatcatcaagtgggagttctactgactcgtacaaagttctgtatggaacatgt
cctgatgaacagtgcaaagcaaagctgtattttccatcctatgacaaaagcattgagtgc
accaactgtggacagagacatgagaaatctgccatcaaaaatattgcagaggtgactaat
ccaaaagtggctctgcacaacattctgaaaaacattcttcttggaaatgtgaaacccaag
aaaggtgcagataatgtgaaagtcctgggcctctccaactatgtgtgtaaaatcgtgtca
ccaatcctaacaaggtatggcatggacaaaaatacaggaacagccaagctgctgactgag
ctgggccaaccagcagaactgaattgtgggaagattcttggtgatagagcttttctcatc
gaggaagaaaatctggatattattggttatggaaaggatcgaacaggtagtgctcagtat
cttgcggacacccttaatgtcattaaagatgccaatgataatgagactagactggtcccc
attcatgctgatggggatggccattgccttgtgcatgctgtatcaagagctctggttggc
cgagaactattttggcatgctctgcgagtaaaccttatgcaccatttgcagtcaaagttg
accacctataaggatcttttctgtgattttattgacgtagatgagtggtcagccatcatt
agagaatgtgatcctaactttgtgccacaagatggagaacctcttggtttgcgaaatatt
catgtgtttggactggcaaatgtgttgagaaggccaataattttgttggattctatcagc
ggaatacagagctcaggagattattcaggtgtatttcttcccggtctcttgtcccccgat
gaatgcaaaagcaaagatggtcttctgaataaaccactctgcattgcctggagtagcatg
ggaaggaaccattacattccactggtgggaattaaagggaaggagcagcctttgctgcct
cgatacatgattcagagagcctggggcctgccctccatacaaatcgaaaagtacatagac
ttcaatgagaagggttgttgtgtgataggaggaaataaatgtctgtctgataaatatata
aggaccctggtgtcggccatggaaaaggtttacatggataaatatggagttcatcctcag
cttgtggcggacacccaccagtatctctacagaaccctaggtatggtgggtgtaaagatg
gaagaagttctgaaaacgacccgagaggcaatccagaagaaaactctgtaccggtgtttg
acttgtgaagccatcatggagtaccaactccacgaggaatggttccgtaaaggtggaaat
ctttacaacctggccgtgcaaacccacgggaaactgagatctgataaaaagtactccttt
ccacaacaaggagctgtgtgtagctatgataaggatcaggataagctggttcccgacctc
agccgatgtaagcccagcacttgtacatactgtcaaggtgagaacgttcgtctggtgaaa
ggggatggaaccgtttgttatgagaatggagatcgaaccactacccccacagtgaccggt
agatgcatgtgtggattcaaacatttttgggatggaaaggaatatgacaacttacctgaa
atttttcccatttctatggaatggaatggagaggtggtctcagagaaagtagtttggttt
caatacgaatcggacatcaccctgaacagtaatgtgtttgaagtggcgcaaaaactagtc
cagaagcatttcccaggagagtttggcagtgagcgcctagtacagagagtggtagataca
atactacgccatacagcaccgaaagtgaaggaccaggagggagccagtacctcagttgtg
tccccttatcaagacacagattggtcagccgaggagccctcaaagattattctgacaggg
cacaagcaaaaaactctccataaggaggaactgacagtaagtcagaaggagagaatggtt
aagaagcagatagagacacaggcccccaaacaccagcagaagaaatcccaggaagtagct
gcttcaggcagcaagtcctctccctcaaagccaaaagtggagacagcacatagaaaagaa
acctcaccagttcccatggaaactgataaatcctgtagtcagaagaaaatacgagttgcc
acgtctgatggaagacaggtaatgttgtctgtggagggacaggtgaactttgagagactt
caggacatgatctataaagcagtgaaggtgcccccagagcgacagaggatacgcatcggc
ttccctcccaaagagctgaagagaccctcgggctcggaccttcacgaacccattcctctg
gcccacggagacaaaatttccctggagattattccacttacgcactccttatcagaatct
ggagccgaaagtcctcgccaccatgaacacagtgcactgagacattcctcctcttccccg
gctaaatccaagcagagctggagcagctttgaggaggacatccacaccaactcattcgag
cctctcctacaaagctttcatgaacatgcaggtaataacagcttggatgctgcagttgcc
tctcttaccataatggctaccttgaaaggtcgtgacctttggactcatgtccagaccatg
cctcatttattttctgtgggtggattgttctacaaacaggtagagcgtgacttggggctt
gtagatggaaaacattgcactttgcctacacttcctgggaaggtattcagatataaccag
gcggagagcaggctagaactgtgcatggagccatatggacacttttccattgaaccggat
gttgaaaacaaagcaaaggaaacgcgacctatatttggttctcggagtgatggttcattt
agtgcattcagtggtgctgtgggacaggaaaagagcaaaaagactgcattcacaggtcaa
ggacattccttaaagtcaatgcctgacattgagagaatgccagaggacatcccagaaagt
tcacatcaacatgcacggcactctcacaccctatgtaacccatattatcaccaagaatcc
atagcagaggagccagaggaacaatctgtatcggagggggtggagaaatctaagggggag
ggtgacggaaaccgaccatatcagcggataggaccggggtatagtgtgattaatccctcc
actgttaatcagaccaaccagtccattcaacagttcaaggatctggcagagaacattgaa
agaacaatgcatgaggatatttccaaaattgatgaagagatggagaaactggacgaggag
gaaaagaaaagcaggacttttagtgtgagctcaacaaacgcccctggaaacccagaggag
ggcggggctagccaggactcgggggagaaaccggacaatgcaggctctgtcacaaaggaa
gaaagcatggaggtggcaggcagtgaggagggtagacaacccataacaagtacagccaga
gactcgggccaaaccatggaggatcagtga
DBGET
integrated database retrieval system
