Crassostrea virginica (eastern oyster): 111132811
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Entry
111132811 CDS
T09197
Name
(RefSeq) transcription factor RFX4-like
KO
K09174
regulatory factor X 4
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvn03000
]
111132811
Transcription factors [BR:
cvn03000
]
Eukaryotic type
Other basic domains
RF-X
111132811
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RFX_DNA_binding
Pox_D5
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
111132811
NCBI-ProteinID:
XP_022336361
UniProt:
A0A8B8EA49
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Position
5:18511153..18523639
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AA seq
725 aa
AA seq
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MLVLITFHDPPCTRTSMERFGEMSTLESGINITSLTGSYHRRFPENDKLPLPDNDADDSC
PPSQRRIGDEETNLENFHRLRNCSKSHSTPATLKWLEENYETAEAVCIPRSTLYCHYLHY
CETNDTQPVNAASFGKIIRQQFPQITTRRLGTRGQSKYHYYGIGVRETSKYYESVYSSKG
APSPNDGKKEQTKQIVAYSPRSKLGTLLPDFPDIKDLKLPEDIPEDKVLTFIMMYRTHCQ
RILDTVIRANFDEVQSFLLHFWQGMPEHMMAILDSQTIVLLVGVCDTMLYKAIANVLMPT
VLQALPESLIQVIKKFSQQLDDWLNVALDSLPSDIREMKFNLARRFAQVLRRQISLNHLC
QAARSVVHNPEISAQMLEDWISVDLNSIIKQTLYTMGPYRAKVTDTIVDLCGEFEQLLED
QAPLQSYVEWMDNMVDRCVVQPAKKCPGMVRRTARQFLLMWSCFGTRIIRDMTLHSAPSF
GSFHLLHLMFDDYVLYLVENLYSQERSRDFLRRIKGEITDLSDEEPLPDYSSLKQASLAA
EPRTSPRANMTAVEFQTDDSKRNTDRDVSSRLRFTDLVQAFECTHPNVNQHSQALKHGRH
PYHIAEPAISYGSRCPISSTQTNNTTSNNSCLNQEQNNEITRQGTFFMEVQGTSSIMEHA
NFSQQNQEFSFQHFLKNQPTTRGQFDQPMEKASNPPDVATNYGYTSGYCYDFHSPYLYKQ
KIQNC
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcctaatcacatttcatgatccaccgtgcacgaggacctccatggagcgcttt
ggcgaaatgagcaccttagaatctggaattaatattacgtcacttactggaagctatcac
agacgattccccgaaaatgacaagctgcctttaccagacaacgacgcagacgacagctgt
ccgccatcacagagacgcattggtgatgaagaaacaaacttagaaaacttccatcgcctt
cggaactgttccaaatcacattcgacacctgcaactttaaaatggttggaggagaattac
gagactgccgaggcggtgtgtatccccaggagcactctgtactgtcactacctccactac
tgcgagaccaatgacactcaacccgtcaacgccgccagcttcggaaagataattcggcaa
cagtttccacaaatcacgacccgacgtttaggtacaagaggccagtcaaaataccattac
tacggcatcggcgtcagagaaacttccaaatattatgaatctgtctattcatctaaggga
gctccaagcccaaatgatggaaagaaagagcaaacaaaacagattgttgcttattctccc
cgctccaagctcggcaccttgttgccggattttcccgatattaaagacttaaaactgcca
gaagatatacctgaggacaaggtactgacattcataatgatgtacaggacacattgccag
cggatcctggacaccgtcatcagagccaactttgacgaggtacagagtttcctgctacac
ttctggcaaggaatgccggaacacatgatggcgattctggactcgcagacaattgtgttg
ttggtcggagtgtgtgacacaatgctctacaaggccatagccaacgtcctcatgcccaca
gttctacaagctcttccagaaagtttgatacaagtaatcaagaagttttcgcaacaacta
gatgactggttaaatgttgctttggattccttgccgagcgacatcagggaaatgaaattc
aatctggcccgtcggttcgcccaggtactgcgtcgccagatctccctgaatcacctatgt
caggcggcgaggtccgtggtccacaaccccgagatctcggcccagatgttggaggactgg
atcagcgtggacctcaacagcatcatcaaacagactctgtacaccatggggccatacagg
gcgaaggtcaccgacaccatcgtggacctttgcggggaattcgaacaactcctggaggat
caggctcctttgcagtcttatgttgaatggatggacaatatggtggataggtgtgtcgta
cagccagccaagaagtgtcccggcatggtgcggcggacagcgcgccagttcctgctcatg
tggtcttgttttggaaccaggattatccgggatatgactctccacagcgccccgagcttt
ggttctttccatctactgcacctgatgtttgacgactatgtgctgtacttagtagagaat
ctctacagccaggagagatccagagacttcctgaggcggatcaagggtgaaatcacagac
ctttcggatgaagaacctcttcctgactatagctcactgaaacaggcttccttggcagcc
gaacctagaacgtctccaagagcgaatatgacggcggtggaatttcaaactgatgattcg
aaaagaaataccgacagagacgtttcttcaagacttcgatttacggatctcgtacaggct
tttgaatgcacacatccaaatgttaaccaacattcacaggcgttaaaacacggccgccat
ccgtaccacattgccgagcccgccatttcatacggatcacggtgtcctatatcaagtaca
caaacgaacaacaccacatcaaataacagttgtctgaatcaggaacaaaataatgagata
actcgacagggcacctttttcatggaagtacaagggaccagcagcatcatggagcatgct
aacttttctcagcaaaaccaggagttttcattccagcatttcttgaaaaaccagccaact
acccgtggccaatttgatcaaccaatggaaaaagcctctaaccccccggatgttgccacg
aactatggttacacatccgggtattgttatgacttccattcgccttatttatacaaacag
aagatacaaaattgttga
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