KEGG   Crassostrea virginica (eastern oyster): 111132811
Entry
111132811         CDS       T09197                                 
Name
(RefSeq) transcription factor RFX4-like
  KO
K09174  regulatory factor X 4
Organism
cvn  Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:cvn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cvn03000]
    111132811
Transcription factors [BR:cvn03000]
 Eukaryotic type
  Other basic domains
   RF-X
    111132811
SSDB
Motif
Pfam: RFX_DNA_binding Pox_D5 DNA_pol_A_exo1
Other DBs
NCBI-GeneID: 111132811
NCBI-ProteinID: XP_022336361
UniProt: A0A8B8EA49
LinkDB
Position
5:18511153..18523639
AA seq 725 aa
MLVLITFHDPPCTRTSMERFGEMSTLESGINITSLTGSYHRRFPENDKLPLPDNDADDSC
PPSQRRIGDEETNLENFHRLRNCSKSHSTPATLKWLEENYETAEAVCIPRSTLYCHYLHY
CETNDTQPVNAASFGKIIRQQFPQITTRRLGTRGQSKYHYYGIGVRETSKYYESVYSSKG
APSPNDGKKEQTKQIVAYSPRSKLGTLLPDFPDIKDLKLPEDIPEDKVLTFIMMYRTHCQ
RILDTVIRANFDEVQSFLLHFWQGMPEHMMAILDSQTIVLLVGVCDTMLYKAIANVLMPT
VLQALPESLIQVIKKFSQQLDDWLNVALDSLPSDIREMKFNLARRFAQVLRRQISLNHLC
QAARSVVHNPEISAQMLEDWISVDLNSIIKQTLYTMGPYRAKVTDTIVDLCGEFEQLLED
QAPLQSYVEWMDNMVDRCVVQPAKKCPGMVRRTARQFLLMWSCFGTRIIRDMTLHSAPSF
GSFHLLHLMFDDYVLYLVENLYSQERSRDFLRRIKGEITDLSDEEPLPDYSSLKQASLAA
EPRTSPRANMTAVEFQTDDSKRNTDRDVSSRLRFTDLVQAFECTHPNVNQHSQALKHGRH
PYHIAEPAISYGSRCPISSTQTNNTTSNNSCLNQEQNNEITRQGTFFMEVQGTSSIMEHA
NFSQQNQEFSFQHFLKNQPTTRGQFDQPMEKASNPPDVATNYGYTSGYCYDFHSPYLYKQ
KIQNC
NT seq 2178 nt   +upstreamnt  +downstreamnt
atgctggtcctaatcacatttcatgatccaccgtgcacgaggacctccatggagcgcttt
ggcgaaatgagcaccttagaatctggaattaatattacgtcacttactggaagctatcac
agacgattccccgaaaatgacaagctgcctttaccagacaacgacgcagacgacagctgt
ccgccatcacagagacgcattggtgatgaagaaacaaacttagaaaacttccatcgcctt
cggaactgttccaaatcacattcgacacctgcaactttaaaatggttggaggagaattac
gagactgccgaggcggtgtgtatccccaggagcactctgtactgtcactacctccactac
tgcgagaccaatgacactcaacccgtcaacgccgccagcttcggaaagataattcggcaa
cagtttccacaaatcacgacccgacgtttaggtacaagaggccagtcaaaataccattac
tacggcatcggcgtcagagaaacttccaaatattatgaatctgtctattcatctaaggga
gctccaagcccaaatgatggaaagaaagagcaaacaaaacagattgttgcttattctccc
cgctccaagctcggcaccttgttgccggattttcccgatattaaagacttaaaactgcca
gaagatatacctgaggacaaggtactgacattcataatgatgtacaggacacattgccag
cggatcctggacaccgtcatcagagccaactttgacgaggtacagagtttcctgctacac
ttctggcaaggaatgccggaacacatgatggcgattctggactcgcagacaattgtgttg
ttggtcggagtgtgtgacacaatgctctacaaggccatagccaacgtcctcatgcccaca
gttctacaagctcttccagaaagtttgatacaagtaatcaagaagttttcgcaacaacta
gatgactggttaaatgttgctttggattccttgccgagcgacatcagggaaatgaaattc
aatctggcccgtcggttcgcccaggtactgcgtcgccagatctccctgaatcacctatgt
caggcggcgaggtccgtggtccacaaccccgagatctcggcccagatgttggaggactgg
atcagcgtggacctcaacagcatcatcaaacagactctgtacaccatggggccatacagg
gcgaaggtcaccgacaccatcgtggacctttgcggggaattcgaacaactcctggaggat
caggctcctttgcagtcttatgttgaatggatggacaatatggtggataggtgtgtcgta
cagccagccaagaagtgtcccggcatggtgcggcggacagcgcgccagttcctgctcatg
tggtcttgttttggaaccaggattatccgggatatgactctccacagcgccccgagcttt
ggttctttccatctactgcacctgatgtttgacgactatgtgctgtacttagtagagaat
ctctacagccaggagagatccagagacttcctgaggcggatcaagggtgaaatcacagac
ctttcggatgaagaacctcttcctgactatagctcactgaaacaggcttccttggcagcc
gaacctagaacgtctccaagagcgaatatgacggcggtggaatttcaaactgatgattcg
aaaagaaataccgacagagacgtttcttcaagacttcgatttacggatctcgtacaggct
tttgaatgcacacatccaaatgttaaccaacattcacaggcgttaaaacacggccgccat
ccgtaccacattgccgagcccgccatttcatacggatcacggtgtcctatatcaagtaca
caaacgaacaacaccacatcaaataacagttgtctgaatcaggaacaaaataatgagata
actcgacagggcacctttttcatggaagtacaagggaccagcagcatcatggagcatgct
aacttttctcagcaaaaccaggagttttcattccagcatttcttgaaaaaccagccaact
acccgtggccaatttgatcaaccaatggaaaaagcctctaaccccccggatgttgccacg
aactatggttacacatccgggtattgttatgacttccattcgccttatttatacaaacag
aagatacaaaattgttga

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