Crassostrea virginica (eastern oyster): 111132898
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Entry
111132898 CDS
T09197
Name
(RefSeq) E3 ubiquitin-protein ligase SIAH1-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04120
Ubiquitin mediated proteolysis
cvn04137
Mitophagy - animal
cvn04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111132898
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
111132898
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
111132898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvn04121
]
111132898
Enzymes [BR:
cvn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111132898
Ubiquitin system [BR:
cvn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
111132898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_3
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
111132898
NCBI-ProteinID:
XP_022336538
UniProt:
A0A8B8EAD7
LinkDB
All DBs
Position
1:complement(4035331..4046467)
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AA seq
270 aa
AA seq
DB search
MCDNISEMHTNLLAAAGSSNSDLASLFECPVCFDYALPPITQCQSGHIVCQACKQKLNMC
PTCRGPLGNIRNLAMEKVATTVMFPCKYSSSGCPVTLLHTEKQEHEETCEYRPYCCPCPG
ASCKWQGSLEQVMGHLMQQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHNFMLV
LEKQEKLEGQQMFYAIVQLIGTRKQAENFAYRLELNGHRRRLSWEATPRSIHDGVQSAII
ASDCLVFDTNIAQLFADHGNLGINVTISMC
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgacaatatctctgagatgcacactaacttgttggctgctgctgggagcagtaat
tcggatctggcctccctctttgagtgtccggtctgctttgactatgccctgccccccatc
actcagtgtcagagtggacacatcgtgtgccaggcctgtaaacagaagctaaacatgtgc
cccacgtgtcgaggacctttgggcaacataaggaacctagccatggagaaggtggccacc
acagtgatgttcccttgtaaatactcctccagtggctgtcctgttaccctcctacacaca
gagaaacaggagcacgaggagacttgtgaatacaggccttactgttgtccctgtcctgga
gcttcctgtaaatggcaggggtcattggagcaggtcatgggtcacttgatgcagcagcac
aagagcatcaccacactccaaggggaggacatcgtattcctggccacggacatcaatcta
ccgggggcggtggactgggttatgatgcagtcctgttttggtcacaattttatgttagtc
ctggagaagcaggaaaagctggagggtcagcagatgttttatgccatagtacagctcata
ggcacgcgcaaacaggccgagaactttgcctacaggctggagttgaatggacaccgccgg
cgtctctcctgggaggccacaccgcggagcatccacgacggcgtgcagtcagccatcatc
gccagcgactgtctggtgtttgacacaaacattgcccagctgtttgccgaccacggcaat
ctgggcatcaacgtcaccatttccatgtgctga
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integrated database retrieval system
