Crassostrea virginica (eastern oyster): 111132948
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Entry
111132948 CDS
T09197
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cvn03009
]
111132948
Ribosome biogenesis [BR:
cvn03009
]
Eukaryotic type
90S particles
Other 90S particles
111132948
Pre-60S particles
Other pre-60S particles
111132948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
CLASP_N
HEAT_DAAF5
Motif
Other DBs
NCBI-GeneID:
111132948
NCBI-ProteinID:
XP_022336615
UniProt:
A0A8B8E903
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All DBs
Position
5:complement(86861250..86913712)
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AA seq
1293 aa
AA seq
DB search
MGSKKLQQKVVSKQQKGKGKRWKKGQSSSSNPQIKTYREAAKNRFFQTSTGKSGLTIDAL
AKHDEQQTDKDGDVSFKAESDIVSATGKTFNTWATSWTECTNTTFGRVHRYWASNSAFHK
EVLAVLAAVTEVIKTQGGSETETEYFAALMTALETTESEESVSAVTYLLSLVLKRVPAPV
LKSRFSEIAKQFLDVLVKYSQGQSTSLLKSLLLCLALLLRVQEQAAWSNSSTQRVYQGLL
AFTIHKKPKVRKAAHQGVNIILRGSTFMTQESTPPCHPAGSMTAKFCIQVIENCGGSGES
SDTLHILTLLKDIMGTFSLNSVKAVCETILRVMTLSNVMVTSSGMKALYGLFSGSPKPTS
LNAELNAQIVTALYDYQPSDNDVQPMKAWLAVMEVAHKNLARLEEKLCLSHQPRIFSVCM
TCLLSEKMEVACSATKTMKELLKVCLAPAVEGISVLLSTAPSGANTPLHKIIKALETGLG
YQFHAAWGLVLQVFAVVFEVSGKECPHLFKKSVLSIANLRDSPRFPYKAELDHAMGAAVR
YLGPRHVLEAVPLNITGDDDDYNFPRSWLIPVIRDNVGNTELGFYTTYFLPLAAKLKKRS
LEAESMGNQVVSKSYEALQRQIWSLLPGFCNNPIDLTQSFKGICKILGSAISERRDLRVE
VMSGLRKLISKSKEQEECRREVARFAKNFLPILFNLFTTEPENAKDTTRLAVLETTKTYL
QIADTALVNTYCDTCKEKFHEEGVSPFKRQALLDLLLVMLPVVDQTRVGEIFQLITPFLS
DVDKTLQKKCYRVLEDLCSCPTPACQGFLTHNLPSIQGVLLQSLSTSSPSSKAPRLRCLI
NIFKLLQEDQKDFLLAVVPEAILCTKEIGEKARSASYLLLVEMGHAKIRWNKDVNGALED
YFQMVMAGLGGSPQMVSSTLLALTRIVYEFKASISSSLLETIVENLCLLLTSKTREVVKA
ALGFMKVLLSAYPDTVLAPHLKQIMSSLVAQKEDCKHHFRFKAKEIYAKLIKKFGYETIF
SMSPPSIHKVLVNIKKTQERAKKKKKEKEEEAESEGESDREHFKSQPESVDELLRDTDSE
EEDETKKKAHKPKDKTQAKLAWLQEGGDIMDFLDPSASRKVLATKPYEKREQKKKKEAEF
KTAPDGRLIITESGDEEGPDKMAEDDDDLEDLINAIEQGAGNVKKTKKRKVEDLGSDDEG
PAPKYKAGGHGIHRPIAKSKASAPSKPGSEYRARKAGGDIKKQGKPDPYAYLPLNFQSLN
KRKKAKMSGRFTNLVKGARKGAKKGSKRKKLMT
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atgggttccaagaaacttcaacaaaaagtagttagcaaacaacaaaagggaaaaggaaaa
cgatggaagaagggccagagtagtagcagtaacccccaaatcaaaacataccgagaggct
gccaaaaatagattcttccaaacatcaacaggaaaaagtggtcttactattgatgccttg
gctaaacacgacgaacagcagacagacaaagatggggatgtcagtttcaaggcagagtcg
gacattgtcagtgcaacagggaaaaccttcaatacctgggcaacaagctggactgagtgt
acaaacacaacgtttggccgagtgcacaggtattgggcatccaattcagccttccacaaa
gaggttcttgctgtactagcagcagtgacagaagtcataaagactcagggaggatctgaa
acagaaacagaatactttgcagctctgatgactgccttggagacaacagagagtgaggaa
tcagtttctgctgtgacttatcttctcagccttgtgttaaaaagagtacctgccccagtc
ctgaagagcagattctctgagatcgctaaacagtttctggatgtccttgtcaagtatagt
caaggtcaatccacttctcttctgaaatcattgttgctgtgcctagctttattgctgaga
gtccaggaacaagcagcatggagcaactcgtcaacacagagggtgtaccaaggccttctg
gcgtttaccattcacaagaaacccaaggtgaggaaggctgcccatcaaggagtcaacatc
atcctgagggggagcaccttcatgacccaggagtccacccctccctgccaccctgcgggg
tcaatgaccgccaagttctgtatccaagtcatagaaaactgtggaggctctggggaatcc
tcggacacccttcacattctgaccttgctcaaagacatcatggggacattctccctcaac
agtgtcaaggctgtttgtgagaccattctcagggtcatgaccctcagtaatgtgatggtg
acatcctctggaatgaaggccctctatggactcttcagtgggtcacccaagcctacctct
cttaatgcagagctgaatgcacagattgtcactgctttgtatgactatcaaccatcagat
aatgatgttcaacccatgaaggcatggttggctgtaatggaggtagcacacaaaaatctg
gcacgactggaggagaagttgtgcctgagccaccagccccggatcttctctgtgtgtatg
acctgtctgctgtccgagaaaatggaggtggcttgtagtgccacaaaaactatgaaggag
cttctcaaagtgtgcctggctcctgctgttgaaggcatcagtgttcttctttcaacagcc
ccatctggtgccaacactcccctgcataaaattatcaaagcactggagacggggctcggg
taccagtttcatgcagcatggggactagtcctgcaggtttttgcagtagtttttgaggtg
tctggcaaagaatgtccacatctgttcaagaagagtgtcctgtctatagccaatctacga
gacagcccgagatttccttacaaagctgagctggaccatgccatgggagcagctgtgaga
tatctcggaccgagacacgttttagaggccgtgcctctcaacatcactggagatgatgat
gactacaactttccccgcagttggttaattcccgtcatcagagacaatgtgggtaacaca
gagttagggttctacacgacctacttcctgccactggccgccaagctaaagaagcgatca
ttagaggcggagtctatgggtaaccaagtggtctctaagtcttacgaggctctacagcga
caaatctggtccctcctgccaggcttctgtaacaaccccatagacctcacacagtcattc
aaaggcatttgtaagatactggggtctgccatcagtgagagaagggacctaagagtagaa
gtcatgtcaggcctgaggaaactcatcagcaagagtaaagagcaagaggagtgcaggaga
gaggtggcacggtttgccaagaacttcctgcccatcctcttcaacctgttcacgacggag
ccagaaaatgccaaggacacgacacgattggcggtgttagaaaccactaaaacctaccta
cagatagctgatactgcgctggtcaatacatactgtgatacgtgtaaagaaaagttccat
gaggaaggtgtgtcaccatttaaaagacaagcactgttggaccttctccttgtcatgtta
ccagtggtggatcaaacacgcgtgggggaaatatttcagctgattacacctttcttatcg
gatgtggacaagaccctgcagaagaagtgttacagggtgttggaggacctgtgtagctgc
cccacccccgcctgtcagggattcctcacccacaacctgcccagcattcagggggtgctg
ctccagtcactttctacctccagtccttcctccaaagcgcctcgacttcgatgtctgatc
aacatatttaagttattacaagaggaccagaaggattttctactggccgtcgtaccagag
gctattctttgcacaaaagagattggagaaaaagcgcgttctgcatcttatttgttgctg
gtggaaatgggtcacgccaagatcagatggaacaaggatgtgaatggtgccctggaggac
tacttccagatggtgatggcaggattagggggttcccctcaaatggtcagctccaccctg
ttggccttgacccgcattgtgtatgagttcaaagcctccatcagctcctctctgcttgag
accattgtagagaacttgtgtctgctgctgacgtccaagacaagagaagtggtgaaggcg
gcactaggcttcatgaaggtcctactgtctgcctacccggacactgtgctggccccccac
ctcaaacagatcatgtcaagccttgttgctcagaaggaggactgtaagcatcactttaga
ttcaaggccaaagagatttatgccaaactcatcaagaagtttgggtatgagaccatcttt
agcatgtcacctcccagtatccacaaggtgttggtgaacataaagaaaacacaagagaga
gcaaagaaaaagaagaaggagaaagaggaggaggcggagtccgagggagagagtgacagg
gagcacttcaagtctcaaccagagagtgttgatgagctactgagagacacagattctgag
gaagaggatgagacaaagaagaaagcacacaaaccaaaggacaaaacacaggccaaactg
gcctggctccaggaggggggagatatcatggacttcctggaccccagtgcctcccggaaa
gttctagctaccaagccatacgaaaagagagagcagaagaaaaagaaagaggctgagttc
aagacggctcctgatggccgactgatcatcacagagtccggtgatgaggaaggtcctgat
aaaatggcagaagatgatgatgacctggaggatttgataaacgccattgaacaaggagca
ggaaatgtgaagaaaactaagaaaaggaaagtggaagaccttggttctgatgatgagggc
ccagcacccaagtataaagctggaggtcacggtatacaccgaccaattgcaaagtccaag
gcttcagcccccagtaaaccagggagtgagtacagagcgagaaaagctggaggtgacata
aaaaagcagggcaagcctgacccttacgcttacctccctctgaacttccagtctctcaat
aagaggaaaaaggcgaagatgtctggtcgttttaccaacctggtgaaaggggccagaaaa
ggggccaagaaggggtcaaagaggaagaagctgatgacgtga
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