Crassostrea virginica (eastern oyster): 111132997
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Entry
111132997 CDS
T09197
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD-like isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cvn01002
]
111132997
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvn04121
]
111132997
Enzymes [BR:
cvn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
111132997
Peptidases and inhibitors [BR:
cvn01002
]
Cysteine peptidases
Family C67
111132997
Ubiquitin system [BR:
cvn04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
111132997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
111132997
NCBI-ProteinID:
XP_022336724
UniProt:
A0A8B8EAM4
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Position
5:53269677..53284646
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AA seq
970 aa
AA seq
DB search
MSDHNDNVYYILLADKIGKKKERGILRTTSSKVDVLPGTLLLLVEERNDKQRNTLLWTLE
TLDPENIEIDCQPTDTGQLTKTEFALLQPIPVCQERLSIFQDQEWLKEGAQLQMNDPVTV
AVKGQPYLKGIIKYKGELPGVKGIQFGIELLGESKGKGTCDGVFRKKRFFTCEPNCGFFA
AIHKVRRDQDVPYRGQYSDRSIPIHNDSPLYHQERKLIEESGLKEKDRIVWISDNGPEFG
EVKWIGILPDSNRRDITVGVEFDNPVGSGTGKYKNHRLFYAKAQHASLVPIMGLMKADVY
MEMNQGAAFGANYQGDYGHFLPEEPERINSPRPNQLRSAQHNTSANYYPVQKEILAQPVQ
TSERGSYSSNSSSSSHQLMLSKDQVQVHIPPVSPKEKLPPPTPKESATPVRPMEEERPGE
MGGPNPLYEYTKTQDPAVQAEIKVESLEQPNSRRSNPANPSPRSLINADPDLEVGSMVEV
MSNPPLYGVIRWMGYLPDQKDPVKPIAGLEMEEEISAGTDGSFGKHRFFSCPPKKAFFVP
LYKCRKDKRFVDSARRNSGLSNNFGSMETPDVIGSISPPDSLTVKQIELDVCGKQKGIQG
HHNSCYLDATLLAMFYFTTVFDGILYRPKRIDDLYEYDEVKQVIKEGIVNPLRKHNYVRA
DKVMKLRHLLDKLGNIPGMMSEEKDPEEFLNLLLNQITKADPFLHIRSDNGGGAQHSFLY
QLIMEKDERLVLPTTQQLFELSFLQMKVKLEERPPCLILQMPRFGKDYKMYRRIVPSLEL
DITDVLQNAPRECIICGDLAAFECKECYNQHGAGLNTIAFCEGCKDMSHKHKVRVNHKWE
AITVPQDYRVIHNEQKTIQQQNPSIPREKMELFAVVCIQTSHYVCFVKCGKGKEAPWIFF
DSMADRMGEQSGYNIPEVKLCPDLSKWLSEDYQEEIMRRTDDKELPEHIRRLLCDAYMCM
YQSPEVSMVR
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaccacaatgacaacgtttattacattcttcttgccgataaaataggaaagaag
aaagagagagggattttacgaacgacctcgtcaaaggtagatgttttacccggaactctc
ttactgctggtggaggaacgtaatgacaaacagaggaacaccctcttgtggactctagag
accttagaccccgaaaatattgaaatcgactgtcaaccaacggatactggacaactcact
aagaccgaatttgctctgctccagcccattcctgtctgtcaagaacgtttgtccattttt
caagatcaggaatggctgaaggagggtgcccagctccaaatgaacgatccggtgacagta
gccgtcaaaggacaaccgtaccttaaagggatcatcaagtacaaaggggagttaccaggg
gtgaaggggattcagtttggaatagaactccttggggagagtaaggggaagggaacctgt
gatggagtgttcagaaagaagcgcttcttcacctgcgaacccaactgtggcttttttgcg
gccattcataaggtgcggagagaccaggatgttccgtatcgtggccagtattccgaccgg
tcgatcccgatccacaacgactcgcccctgtaccatcaggagaggaagctgatcgaggag
tccggactcaaggaaaaggatcggatcgtctggatcagtgataacggtccggagttcgga
gaggtcaaatggattgggattctcccggacagcaatcgcagggatatcaccgtcggtgta
gaatttgataatccagttgggtcaggtacagggaagtacaaaaatcatcgcctcttttac
gccaaagctcagcatgcctccttggtaccgatcatgggtttgatgaaagctgatgtttac
atggagatgaaccagggagcagcttttggtgccaactatcagggcgactatggtcacttt
ttaccggaggagccagagcgcattaactcccccaggcctaaccaattacggagtgctcag
cacaacacgtcagcgaactactatcctgttcagaaagagattctggctcagcctgtacaa
acctcagaaaggggaagttactccagcaattcctcctcctcttcacaccaactgatgcta
tccaaggatcaagtccaggtccacataccccctgtttcccccaaagagaagttaccccct
cccacccccaaggaatcagccactcctgtgagaccaatggaggaggagagaccaggggag
atgggtggccccaacccactgtatgaatacacaaaaacacaagacccagctgtacaggca
gagattaaggtggaatcccttgagcagcccaacagccggcgcagtaatcctgccaatccc
tccccacgatccctcataaatgccgaccctgaccttgaggtggggtcaatggtggaggtc
atgtctaacccgcccctctacggagtcatccgatggatgggatacctcccggaccaaaag
gatccagttaaacccatcgcggggctggagatggaagaagaaatatcagctggaacagat
ggcagttttggaaagcatagatttttctcatgtccaccaaagaaagcgtttttcgtacct
ctctataagtgtcgaaaagacaagcgttttgtggacagtgctagaagaaatagtgggtta
tccaataactttgggagcatggaaacccccgatgtgattgggagtatttctcctccggat
tctctgactgttaaacagatagaactggatgtgtgcggaaaacagaagggcattcagggt
catcataactcttgttacttagatgctacgttactagcaatgttctattttaccacagtg
tttgacgggattctataccgacctaaacgcattgatgacttgtatgaatatgatgaagtg
aaacaagtgattaaagaaggcattgttaacccattaaggaaacataactatgttcgggca
gataaagttatgaaattacgtcatcttctggacaaattagggaacattcccgggatgatg
agtgaggaaaaagatccagaagaatttttgaatttacttctaaaccagataaccaaagcg
gacccctttttacacattaggtctgacaatgggggaggtgcccagcattcctttctctat
cagctgatcatggagaaggatgaacgtctcgtgcttccaaccacccagcaattgtttgaa
ctctcgtttctccagatgaaagtgaaactagaggagcgaccaccatgtttaattcttcag
atgccaagatttggaaaggactacaagatgtaccgtagaatagtgccaagtctggagctc
gacatcacagatgttttacagaatgccccccgggagtgtatcatttgtggggacctggcg
gcatttgagtgtaaggagtgttacaaccagcacggagcagggctaaacaccatcgccttc
tgtgagggctgtaaagacatgagccacaaacacaaggtcagggtcaaccacaagtgggag
gccattacggtcccccaggactaccgggtcatccacaacgagcagaagacaatccagcaa
cagaaccccagcattccccgcgagaagatggagctgtttgccgtggtgtgtatacagacc
agccattacgtgtgcttcgtcaagtgtggcaagggaaaggaagcgccctggatcttcttt
gattccatggcagatcgtatgggtgaacagagtggatataatattccggaggtcaaactg
tgtccggatttatccaaatggttgtcagaggactatcaggaagaaatcatgcggcgaact
gatgacaaagaactccctgagcacatccgtcgtctgctctgtgacgcgtatatgtgcatg
tatcagagtcccgaggtatccatggttcggtga
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