Crassostrea virginica (eastern oyster): 111133046
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Entry
111133046 CDS
T09197
Name
(RefSeq) tuftelin-interacting protein 11-like
KO
K13103
tuftelin-interacting protein 11
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvn03041
]
111133046
Spliceosome [BR:
cvn03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
111133046
Other components
Complex C specific factors
111133046
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
DUF5099
Motif
Other DBs
NCBI-GeneID:
111133046
NCBI-ProteinID:
XP_022336806
UniProt:
A0A8B8E837
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Position
5:35761629..35769027
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AA seq
819 aa
AA seq
DB search
MSSPEVEKFEVTEDDLANEFYPRGGRRQTKNQAIYGMWANSDDEDTPGFGSSRRKKKDYT
APIGFVSGGIKQGSKIKKEGEEDDSSDSDKDDIVIQMPVKHPTLRPSRPPPPGRQGKQFA
GFGKAEVGFGEWEKHTKGFGKKLLEKMGYKEGGGLGKHGQGITTPVEAVKRKGKAAVGAY
GTERSERSLVDFPVHDSDEEEEKRFKEELSQWKKKPEVGKKKPKYVYKTAQEIIESGVGK
TKKSAPSKASKVKVIDMTGKEKKVFSGYHALATRHNRPDEEEDIMEPEPGQKKAFEMPEL
MHNLNLLVDMAEEDIITNDRKLRYEQDHIINMKHEKERLDTICDQEEAQIQKLKKVLDIV
RMCEERTQPGCDNPMELDECAAIFRSLQNDFYEEYVMYDLSSLAVALVFPLMKKYFYTWD
PLKDPTYGLHTIQQWKSLLEDYNNQYAGNSTDMDVFQRLLWDVWLPYLRTTILKWNVRAC
NPLIEVLETWLPVLPSWITENILDQLVLPRLLQEVENWNPLTDTMPIHAWLHPWLPLMKD
KLEPLYAPIRHKIANALINWHPSDASAKVILQPWVKVFKPGHLEAFLVKNILPKLAMCMQ
EFVINPHQQILEPWHWVMSWSDIIPTKYMVDMLEKTFFPKWRTVLCTWLSNMPNYDEITK
WYLGWKSLFSEEFLSQPSIRDNFNKALEIMNRAVSSHIQPGVKENMAYFSQMERRQMGET
PGLSTSRSPPRQTTGPEPSYTRSVTVGTNYQPTFKDIVEKAAEENGLLFMPIAGKTQEAK
QVYRYGKVQIYLDRNVIFVYENLNWIPVSLQNLVMKAKP
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctccagaagtggagaagtttgaggtgactgaagatgaccttgctaatgaattt
tatccaaggggaggaaggaggcaaacaaaaaatcaagccatttatggaatgtgggcaaac
agtgatgatgaagacaccccaggttttgggagcagtagaaggaagaagaaggactacact
gctcctataggatttgtcagtggagggatcaaacagggatcaaagataaagaaagaaggg
gaggaagatgactcctctgattcggacaaggatgacattgtgatacagatgccagtcaaa
catcccacactgagacccagtagaccaccacctccaggaagacaaggcaaacagtttgct
ggatttggtaaagcagaggttggatttggagaatgggaaaaacacacaaaaggttttggg
aaaaaacttttggaaaagatgggttataaagaaggaggaggattgggaaaacatggtcag
ggtatcactacaccagtggaggccgtgaagcggaagggcaaagctgcagtgggggcctat
gggacagagaggtcagaaaggtcattggtggattttcctgttcatgactctgatgaggag
gaggagaaaaggtttaaggaggagctctctcagtggaaaaagaaaccagaagttggtaaa
aagaaaccaaaatatgtgtacaagacagcacaagaaattattgagtcaggggttggaaaa
actaaaaaatctgcaccctccaaagcctcaaaagtgaaggtcattgatatgactggaaaa
gaaaaaaaagtcttctcaggataccatgcccttgctacccgacacaaccgaccagacgag
gaagaggacattatggagcctgaaccaggccagaaaaaggcttttgaaatgcctgagttg
atgcacaacctgaacctccttgtggacatggcagaggaagacatcattacaaatgacagg
aagctgcggtacgaacaagatcacatcatcaacatgaagcatgaaaaagagcgattggat
acaatttgtgatcaggaggaagctcagattcagaaactcaaaaaagtcttggacattgtc
agaatgtgtgaggagagaacacagccaggttgtgataatccaatggagctggatgagtgt
gcagccatattcaggtcccttcagaatgatttctatgaggagtatgtcatgtatgacctc
tcatcccttgcggtagcactggttttccctttgatgaaaaagtatttttatacctgggat
cccctgaaggatcccacatatggattacacaccatacaacagtggaagtcgttgctagag
gattacaacaaccagtatgcaggaaactccactgacatggatgtgttccagaggctcctg
tgggatgtctggcttccttatctcagaacaaccatacttaaatggaatgtgagggcttgt
aatcctctgatagaggtcttagaaacatggctgccagtgcttccctcgtggatcacagag
aatatcttggatcagctggtgttgccaaggttactccaagaagtggaaaactggaatcca
ttaacagacaccatgcccattcatgcatggttacacccatggcttcccttgatgaaggac
aagctagagcctctgtatgctcccatccgccataagatagcaaacgccctcataaactgg
cacccttcagatgcctcagctaaggtcatactgcagccatgggtgaaagtgttcaaacct
ggccatttggaagcctttctagtgaaaaatatccttcccaagctggccatgtgtatgcag
gagtttgttataaatcctcatcaacaaatactagagccttggcactgggtgatgtcctgg
tcagatatcattcctactaagtacatggtggacatgctggagaagaccttcttccctaaa
tggaggaccgtgctgtgcacgtggcttagcaatatgcctaattacgatgagatcaccaag
tggtatctgggatggaaatccctcttctcagaggagtttttatctcaaccctcaatcaga
gataattttaacaaagcactggagataatgaacagagctgtatcaagtcacatacaacca
ggtgtgaaggaaaacatggcctacttttcccagatggagaggagacagatgggggaaaca
cccggtctgtctacctcacgatcccctccccgccagaccactggaccagagccctcatac
acaagaagtgttacagtgggtaccaactatcaaccaaccttcaaagatattgtcgaaaaa
gcggccgaggagaacggtctccttttcatgccaattgctgggaaaactcaagaagctaaa
caagtgtaccgctacggaaaagttcagatatatttggacagaaatgttatatttgtgtat
gaaaatctgaactggataccagtttctttacaaaatcttgttatgaaggccaagccttaa
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