Crassostrea virginica (eastern oyster): 111133047
Help
Entry
111133047 CDS
T09197
Name
(RefSeq) tuftelin-interacting protein 11-like
KO
K13103
tuftelin-interacting protein 11
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvn03041
]
111133047
Spliceosome [BR:
cvn03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
111133047
Other components
Complex C specific factors
111133047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
DUF5099
Motif
Other DBs
NCBI-GeneID:
111133047
NCBI-ProteinID:
XP_022336809
UniProt:
A0A8B8EBC9
LinkDB
All DBs
Position
5:35597983..35607403
Genome browser
AA seq
819 aa
AA seq
DB search
MSSPEVEKFEVTEDDLANEFYPRGGRRQTKNQAIYGMWANSDDEDTPGFGSSRRKKKDYT
APIGFVSGGIKQGSKIKKEGEEDDSSDSDKDDIVIQMPVKQPTLRPSRPPPPGRQGKQFA
GFGKAEVGFGEWEKHTKGFGKKLLEKMGYKEGGGLGKHGQGITTPVEAVKRKGKAAVGAY
GTERSERSLVDFPVHDSDEEEEKRFKEELSQWKKKPEVGKKKPKYVYKTAQEIIESGVGK
TKKSAPSKASKVKVIDMTGKEKKVFSGYHALATRHNRPDEEEDIMEPEPGQKKAFEMPEL
MHNLNLLVDMAEEDIITNDRKLRYEQDHIINMKHEKERLDTICDQEEAQIQKLKKVLDIV
RMCEERTQPGCDNPMELDECAAIFRSLQNDFYEEYVMYDLSSLAVALVFPLMKKYFYTWD
PLKDPTYGLHTIQQWKSLLEDYNNQYAGNSTDMDVFQRLLWDVWLPYLRTTILKWNVRAC
NPLIEVLETWLPVLPSWITENILDQLVLPRLLQEVENWNPLTDTMPIHAWLHPWLPLMKD
KLEPLYAPIRHKIANALINWHPSDASAKVILQPWVKVFKPGHLEAFLVKNILPKLAMCMQ
EFVINPHQQILEPWHWVMSWSDIIPTKYMVDMLEKTFFPKWRTVLCTWLSNMPNYDEITK
WYLGWKSLFSEEFLSQPSIRDNFNKALEIMNRAVSSHIQPGVKENMAYFSQMERRQMGET
PGLSTSRSPPRQTTGPEPSYTRSVIVGTNYQPTFKDIVEKAAEENGLLFMPIAGKTQEAK
QVYRYGKVQIYLDRNVIFVYENLNWIPVSLQNLVMKAKP
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctccagaagtggagaagtttgaggtgactgaagatgaccttgccaatgaattt
tatccaaggggaggaaggaggcaaacaaaaaatcaagccatttatggaatgtgggctaac
agtgatgatgaagacaccccaggttttgggagcagtagaaggaagaagaaggactacact
gctcctataggatttgtcagtggagggatcaaacagggatcaaagataaagaaagaaggg
gaggaagatgactcctctgattcggacaaggatgacattgtgatacagatgccagtcaaa
cagcccacactgagacccagtagacccccgcctccagggagacaaggcaaacagtttgct
ggatttggtaaagcagaggttggatttggagaatgggaaaaacacacaaaaggttttggg
aaaaaacttttggaaaagatgggttataaagaaggaggaggattgggaaaacatggtcag
ggtatcactacacccgtggaggctgtgaagcggaagggcaaagctgcagtgggggcttat
gggacagagaggtccgaaaggtcattggtggattttcctgttcatgactctgatgaggag
gaggagaaaaggtttaaggaggaactctctcagtggaaaaagaaaccagaagttggtaaa
aagaaaccaaaatatgtgtacaagacagcacaagaaattattgagtcaggggttggaaaa
actaaaaaatctgcaccctccaaagcctcaaaagtgaaggtcattgatatgaccggaaaa
gaaaaaaaagtcttctcaggataccatgcccttgctacccgacacaaccgaccagacgag
gaagaggacattatggagcctgaaccaggccagaaaaaggcttttgaaatgcctgagttg
atgcacaacctgaacctccttgtggacatggcagaggaagacatcattacaaatgacagg
aagctgcggtacgaacaagatcacattatcaacatgaagcatgaaaaagagcgattggat
acaatttgtgatcaggaggaagctcagattcagaaactcaaaaaagtcctggacattgtc
agaatgtgtgaggagaggacacagccaggctgtgataatccaatggagctggatgagtgt
gcagccatattcaggtcccttcagaatgatttctatgaggagtatgtcatgtatgacctt
tcatcccttgcagtagcactggttttccctttgatgaaaaagtatttttatacctgggat
cccctaaaggatcccacatatggattacacaccatacaacagtggaagtctttgctagag
gattacaacaaccagtatgcaggaaactccactgacatggatgtgttccagaggctccta
tgggatgtctggcttccttatctcagaacaaccatacttaaatggaatgtgagggcatgt
aatcctctgatagaagtcctagaaacatggctgccagtgcttccctcgtggatcacagag
aatatcttggatcagctggtgttgccaaggttactccaagaagtggaaaactggaatcca
ttaacagacaccatgcccattcatgcatggctacacccatggcttcccctgatgaaggac
aaactagagcctctgtatgctcccatccgccataagatagcaaacgccctcataaactgg
cacccttcagatgcctcagctaaggtcatcctgcagccatgggtgaaagtgttcaaacct
ggccatttggaagcctttctagtgaaaaatatccttcccaagctggcgatgtgtatgcag
gagtttgttataaatcctcatcaacaaatactagagccttggcactgggtgatgtcctgg
tcagatatcattcctactaagtacatggtggacatgctggagaagaccttcttccctaaa
tggaggaccgtgctgtgcacgtggcttagcaatatgcctaattacgatgagatcaccaag
tggtatctgggatggaaatccctcttctcagaggagtttttatctcaaccctcaatcaga
gataattttaacaaagcactggagataatgaacagagctgtatcaagtcacatacaacca
ggtgtgaaggaaaacatggcctacttttcccagatggagaggagacagatgggggaaaca
cccggtttgtctacctcacgatcccctccccgccagaccactggaccagagccctcatac
acaagaagtgttatagtgggtaccaactatcaaccaaccttcaaagatattgtcgaaaaa
gcggccgaggagaacggtctccttttcatgccaattgctgggaaaactcaagaagctaaa
caagtgtaccgctacggaaaagttcagatatatttggacagaaatgttatatttgtgtat
gaaaatctaaactggataccagtttctttacaaaatcttgttatgaaggccaagccttaa
DBGET
integrated database retrieval system
