Crassostrea virginica (eastern oyster): 111133120
Help
Entry
111133120 CDS
T09197
Name
(RefSeq) vacuolar protein 8-like isoform X1
KO
K08332
vacuolar protein 8
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111133120
03029 Mitochondrial biogenesis [BR:
cvn03029
]
111133120
Membrane trafficking [BR:
cvn04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
111133120
Other autophagy associated proteins
Micronucleophagy
111133120
Mitochondrial biogenesis [BR:
cvn03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
111133120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_2
HEAT
HEAT_EZ
KAP
TOR1L1_N
ZER1-like_2nd
Cnd1
V-ATPase_H_N
Arm_2
V-ATPase_H_C
UNC45-central
Motif
Other DBs
NCBI-GeneID:
111133120
NCBI-ProteinID:
XP_022336922
UniProt:
A0A8B8E8F3
LinkDB
All DBs
Position
1:complement(56716937..56732019)
Genome browser
AA seq
599 aa
AA seq
DB search
MDPQRKSPEHTGTEHKFDIRIERPPSKPDVLDELISILQKFLDFCVCCITCGCYKRPKDG
IVTDEYGMILLDNEKQAVQNLLQYLEKDEKADPLLSSEHIRALSILTYSDNAELQRSAAL
CMLEISEKLKTDLTVALGRPLVELLRSSDTQVQKAATLAVSNFCLTGADTNKEILMRLGV
ADPLVELLSSKNVEVQCNTCGCITALATTDVNKHSIVSSNAIKPLLRLMRSTDLRVKRNA
TGAILNLTHIQSNRNELVNQGAIPALVELIHMSDYDIQYYSAAALSNLAVNPKHRAMMIA
VGHFDVVRQLVKLLSSKKDRVKCQACFALRNLASDDENQLLAVENGALPPLHHILTSCRS
ETLAAAAACLRNLSIHKLNETPFIHENLVPDLCHVVCDSSNPEAQKHIAGTLRNLAVSQY
VRILIENDCVEALTFVLLDLESRTPVLSEVTAALAVMADEDDVKYKLLHLQGGKAFGKLV
TLASLSSHREIQYNSAGTLGQLALVSIPEDLKETNKKGIVLYIDKFLKSPDPSFVHVALW
TLNILLKDIFFLRAFTDHSIESVIEQVQATHQQTKIQELSSSVTDKLHGVMISSSSSED
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggatcctcagcgcaaaagccctgagcacacaggaactgaacataaatttgacattcgg
atagagcgtcctccttctaaacctgatgtgttggatgaactgatttcaattctacagaag
tttctggacttttgtgtgtgttgcattacctgtgggtgttacaagagaccgaaagatggc
attgttacagatgaatatgggatgattctccttgacaatgagaaacaggcagtccaaaac
ttactgcagtatttggagaaagatgagaaagcagacccattgttgtccagtgagcatatc
agagctctgagcatcctgacttactcggacaatgcagagttacagagatcagcggcattg
tgtatgctggagattagcgagaaattgaagacggatttgacagtggccctgggtcgcccc
ctggtggaacttttacgatcctctgacactcaggtgcagaaggcagccacactggccgtc
agtaatttctgtttgaccggggcagacaccaataaagaaattctgatgagacttggagtg
gcagatccattagtagaactattaagttcgaagaatgtggaagtgcagtgtaacacatgt
ggctgcatcaccgctctagctaccacagatgtaaataaacattccatcgtatccagcaat
gccattaagcctctgctacgactgatgcggtccacggatctccgtgtcaaaagaaatgct
actggggccatccttaatttaacccatatacagtccaacagaaatgagctggtgaatcaa
ggagccatccctgctctggtggagctgatccacatgtctgactatgacattcagtactac
agtgcagctgcacttagtaacttggctgtcaaccccaagcaccgagccatgatgatagca
gtcggccattttgatgtggtcaggcaactagtcaaactcctgtcatcaaagaaggatcgg
gtgaagtgtcaggcatgctttgcattaagaaatcttgcatcagatgatgagaaccagtta
ctggctgtggagaatggtgccctgcccccgttacatcacatcctcacttcctgccgatct
gagacgttagccgcggcagcagcctgcctacggaatctctccatccacaaactcaatgag
actccttttatacatgagaaccttgtaccagatctatgtcatgttgtctgtgatagttct
aatccagaagcccaaaaacatatagcaggcaccctgcgcaaccttgctgtgagtcagtac
gtccggatcttgatagaaaatgactgtgtggaggccttgacctttgtactcctggattta
gagtcaaggacacctgttttatctgaggtcacggcagctctagctgtcatggctgatgaa
gatgatgtaaagtacaagttacttcacttacaaggtgggaaggccttcggtaaactggtg
accctggcctcattgtccagtcacagggaaatccagtacaacagcgctggtaccctgggg
cagctagccctcgtcagtataccagaagatttaaaggagaccaacaagaaaggaattgtt
ctgtacattgataaatttctgaaatctccagaccctagttttgttcatgtggcattgtgg
acgttgaacattttactgaaagatatcttttttctgcgtgcttttactgatcacagcatt
gaatcggttattgaacaagttcaggcaactcatcaacagaccaaaatccaggaattgtcc
tctagtgtcactgataaacttcatggggttatgatctcctcctcatctagtgaagactga
DBGET
integrated database retrieval system
