Crassostrea virginica (eastern oyster): 111133206
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Entry
111133206 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: syndetin-like
KO
K23288
syndetin
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111133206
Membrane trafficking [BR:
cvn04131
]
Protein recycling
Others
EARP complex
111133206
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
HEAT_Nup120
Peptidase_M4_C
Motif
Other DBs
NCBI-GeneID:
111133206
NCBI-ProteinID:
XP_022337065
UniProt:
A0A8B8EA94
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Position
1:61345102..61368515
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AA seq
954 aa
AA seq
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MDLKNKIKSILKKQDSLASPPEEVINHDSFTGGPVVTKYKQVKPSNPHEEQEILDGIEKV
YYNTEGIDTSHYELRKLPEVLDLGDIDLDRKRLRKQLQVVSKKVSDLVLQNHPAYARELQ
RVMDLQKTLQYANGICATGRRQLSSARDKFTSASLNMLANYRKRQQLVSLLKSLRTIKTL
QRTDVRLRELMEEEDYCGAIQLCLECQKLPAXYKHFTCISELNSKLQDTLVMIEEQIDVA
LSKTCSHFDEIHYEKVQTAYRLLGKTQTAMDQLHMHFTSAIHNTAFQIVLGYVELCSGTG
KENFXKKQYTDLCKNVTQDSFTPCLIDLSKALWEXMKSYHKTIRWHEEHEEVSEETEDGK
AQADFTKHYIKQKLEHGLSRIWQDVQSKVKIYVLGTDLSGFKLEEFIRVLDLVNRMIEIG
EEFCKSKSEGLQDSLKQQSLNYFKNHHRYRMEELRMFLENEGWELCPVKLSFSYVQLLGN
KFLLNQEFGFMKSWMKSSAMTLNSSSTEDATDTTMMGSTRRRYFMQQAERNPFDEKPDED
ENEDFFSGSWDDEDNGNLTDSDSDVPDELKQDYIDEVTGEDRPSRQTKRRLSKSKNEKFI
PIVTNTTLNVMRVIGKYMQMMTVLKPIAFDVILCMSQLFDYYFYTVYTFFGADTVIKNER
SINNRLNIALQRIHNNLIAESPVPGAPPVDQSDNLEKMPQAYLSPIVDLHRKDQLFGLAE
RVVAVESLIFLAKQLELLQPHLEAMIPPNKKAFLQQFFSQTVNMAEEVRKPVYWRVSAQA
MNYEQVQGQMASVRWDIKDIMSQHNPYIDSMLKNFEWVAHQLVEINRRVPIPRVVYRTLW
EHCVRLANRTFVEGFSNAKKCTNEGRALMQLDYQQFLMKLDTIVDLKPIPEKEFVEGYIK
AYYLPESQLDVWLQDHKEYSNKQLLALINSVDHINKKSRQRLINIVEEMDRNRR
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atggacctcaagaataagataaagtccattttaaagaaacaggactcccttgcctctcca
cctgaggaggtgataaaccatgattcattcactggtgggcctgtagtgactaagtacaag
caagtaaagcctagcaaccctcatgaagagcaagagattcttgatggcatcgagaaagtt
tactacaacacagagggaatagacaccagccattatgagctaaggaaactcccagaagtc
ctagatttaggtgacattgatttggacagaaagaggctccgaaaacaactccaagtggtg
tccaagaaagtgtctgacttggttctccagaatcatcctgcttatgctagggaacttcaa
cgcgtgatggacctccagaaaacgctgcagtatgccaacgggatttgtgccactgggagg
agacagttatcatctgcccgagataagtttacgtcagctagtctgaacatgttggccaac
tacagaaagcgacaacagcttgtcagtttactgaagtcactgaggaccattaagactctg
caaaggactgatgtaagactacgagaattgatggaggaagaagattactgtggggctatt
cagctgtgcttggaatgtcaaaagctgccagcannctacaagcacttcacctgtatcagt
gaattgaactccaaactgcaggacactttggtgatgatagaggaacagatcgatgtggct
ctatccaaaacatgcagtcattttgatgaaatacattatgagaaagttcaaactgcctat
agacttctagggaaaacacagacagctatggaccaacttcacatgcattttaccagtgcc
atacataacacagcattccagatagttcttggatatgtagagctctgctcaggaactggg
aaagaaaactttnccaagaaacagtacacagatttatgcaagaatgttacacaagacagt
tttacaccatgtttgatagacttgagcaaagcattatgggagnntatgaagagctatcac
aagaccattcgatggcatgaagaacatgaagaggtttcagaggaaacagaagatggcaaa
gctcaggccgacttcaccaaacactacatcaaacaaaagctggagcacggactgagccgg
atctggcaagacgtccaatcaaaagtcaagatctatgtcttaggaacagacctatctgga
ttcaaactagaagaatttatacgagtgctggatcttgtcaataggatgatagaaattgga
gaagaattttgtaaaagcaagtcggaaggattgcaggactctctgaaacagcaaagtctt
aactacttcaaaaatcaccacaggtaccgaatggaggagcttcggatgttcctggagaac
gaaggctgggaactctgtccggtcaaactgtccttctcctatgtccagctactgggtaat
aagttcctgttaaaccaggaattcggcttcatgaaatcttggatgaagtcgtcggccatg
acgctgaactccagctccactgaggatgccacagataccaccatgatgggctccaccaga
agacgctacttcatgcagcaagccgagagaaatccatttgatgaaaaacccgacgaagat
gaaaatgaagactttttttctggatcttgggacgacgaagataatggcaacctaactgac
agtgattcagatgtacctgatgagctgaagcaagattatatcgatgaagtcactggagaa
gataggcctagcaggcagacaaaaagaagattatccaaaagtaaaaatgaaaagttcatt
ccaatagtcaccaataccaccttgaatgtaatgagagttatagggaaatacatgcagatg
atgactgtgctgaagcccatagcatttgatgtcatcctgtgtatgtctcagttgtttgac
tactatttctacactgtgtatacattttttggtgctgatacagtgataaagaatgagcgt
tcaatcaacaatcggctcaacattgcgctacaaagaatccataacaatctgatcgcggaa
tctcctgttcctggggccccacctgtcgaccaatcagacaacctggagaaaatgcctcag
gcctatttatcaccaatagtggatctccacagaaaagaccagttgtttggtctggccgag
cgggtggtggcggtggaatcactaatattcttagcaaagcagttagaactactacagcca
catctagaagccatgattcctccaaataaaaaagctttcttacagcaattcttctctcag
acagtgaatatggctgaagaagtcagaaaacctgtgtactggagagtttcggctcaggcc
atgaactatgagcaagttcaaggtcaaatggcctctgttcggtgggacatcaaggacatt
atgtcacaacacaacccatacattgacagcatgcttaagaactttgagtgggtggcgcat
cagctggtggagatcaacaggagggtccccatccctagggtggtgtatcgcaccctgtgg
gagcactgtgtccgactggccaacaggacgtttgtagaaggattttctaacgccaaaaag
tgtaccaatgaaggtcgggctctgatgcagctggactatcagcagttcctaatgaaatta
gacaccatagtagatctaaaacctatcccagagaaggaatttgtggagggttacataaag
gcatactatctccctgagagtcaacttgatgtctggcttcaagatcacaaggaatactca
aacaaacagttactggccttgataaactctgtcgaccatatcaacaagaagtcaagacaa
aggctaataaacattgtggaggaaatggatcgaaatcggagatga
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