Crassostrea virginica (eastern oyster): 111133246
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Entry
111133246 CDS
T09197
Name
(RefSeq) coatomer subunit beta'-like isoform X1
KO
K17302
coatomer subunit beta'
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111133246
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvn04147
]
111133246
Membrane trafficking [BR:
cvn04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
111133246
Exosome [BR:
cvn04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
111133246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_DCAF12
Beta-prop_LRRK2
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
111133246
NCBI-ProteinID:
XP_022337155
UniProt:
A0A8B8EAJ7
LinkDB
All DBs
Position
5:complement(389144..399618)
Genome browser
AA seq
937 aa
AA seq
DB search
MPLRLDIKRKLSARSDRVKCVDLHPTEPWMLASLYNGNVHVWNHESQQLIKSFEVCDLPV
RNSRFVPRKNWVITGSDDMQLRVFNYNTLERVHQFEAHSDYIRCIAVHPTQPFIISSSDD
MLIKLWDWEKKWTCTQVFEGHSHYVMQIVINPKDNNTFASASLDRTVKVWQLGSNTPNFT
LEGHEKGVNCVDYYSGGDKPYLISGADDRLIKIWDYQNKTCVQTLEGHAQNISAVAFHPE
LPIIMTGSEDGTVRIWHANTYRLESTLNYGLERVWTIAAQKGSNNVALGYDEGSIIIKLG
REEPAMSMDSSGKIIWAKHAEIQQANIKAIGDQDVKDGERLPLAVKDMGSCEIYPQTVAH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWSSDSSVYATRESTSSVKIFKNFKE
QKAFKPEFGAEGIYGGYLLGTRSVSGLAFYDWESTDLIRRIEITPKNVYWSENGELCCIT
TEESFFVLKYSSEAVEKARENREEIGEDGIEEAFDVVGEIDETVKTGVWVGDCFIYTNSV
NRLNYYVGGEIVTIAHLDRMMYLLGYIPKDNRLYLGDKELNIVSFSLLVSVLEYQTAVMR
RDFETADKILPMIPREHRSRVAHFLEKQGFKSQALAVTCDPEHKFELALQLGDLKTCYQI
AKEAESDQKWKQLAELAISKCEFGLAQECLHQASDFGGLLLLASSAGNAQMVAKLGDTAE
KAGQNNVAFLSHFVLGRLEECLEVLINTGRLPEAAFFARTYLPSQVSRVVELWREHLAKV
NKKAANSLADPQEYENLFPDWKDALKTEAYLRPQRQRAIAADKFPRVPPNHERTPVEEMK
EAEEQGSFTFVHGPSQDEVDEEEFEEAPDTTEPVKEPSPAPQKKATPPPDPLPSKTEMDD
LEKELELDLENMNLDNVDTSDPANEQDINLDEDLLED
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgcctcttcgacttgatatcaagcgaaaattatcagcgcgttcagaccgagtcaaatgt
gtggacttacaccctactgaaccatggatgctagcgagtttatacaatggaaatgtccat
gtttggaatcacgagtctcagcaactgatcaaatcatttgaggtgtgtgacttacctgtc
aggaattccaggtttgtcccaaggaagaactgggtcatcacaggctcggatgacatgcag
cttcgagtgtttaactacaacacgttggagcgagttcatcagtttgaggcccattcagat
tacatcagatgcattgctgtccatcccacccagcccttcattatcagcagtagtgatgac
atgttgattaagctgtgggactgggagaagaaatggacgtgtacccaggtgtttgagggc
cactcccactacgtgatgcaaatcgtcatcaaccccaaagacaacaataccttcgccagt
gcttctctggacagaacagtcaaggtctggcaactgggatctaacactcctaacttcacc
ctagagggccacgagaagggagtgaattgtgtagattactattcagggggagacaaaccc
tacctgatctctggagcggatgacagactgattaagatctgggattaccagaacaagacc
tgtgtgcaaactctagagggacacgcccagaacatctcagctgtggcctttcacccggaa
ctcccaatcataatgacggggtccgaggacggtaccgtacgaatctggcacgccaacacc
taccgactggagagcacactgaattacggcctggagcgggtgtggacgattgctgcccag
aagggatccaacaatgtcgcccttggatacgacgaaggaagcatcatcatcaagcttggt
cgtgaagaaccagcgatgtccatggacagcagtggaaaaattatctgggccaagcacgct
gagatccagcaggccaacatcaaggccatcggagaccaggatgtaaaggacggagagcgg
ctccctctagcggtcaaagacatggggagctgtgagatctaccctcagaccgtggctcac
aaccccaacggaaggttcgtggtggtgtgcggggatggtgaatacattatctacacagcc
atggctcttagaaacaaaagttttggatccgcccaggagtttgtgtggagtagcgactcc
tccgtgtatgctaccagggagtccaccagctccgtcaaaatcttcaagaacttcaaggaa
cagaaggcattcaaaccagaatttggagctgaggggatttacggagggtacctgttgggc
actcgatcagtgagtggtctggctttttacgactgggagtctacagatctaatcaggaga
atagaaatcacaccgaaaaatgtatactggagtgagaacggcgagttgtgctgcatcacc
acggaggagtcgttctttgtcctgaagtacagctccgaggcagtggagaaggctcgggag
aaccgtgaggagattggagaggatggaatagaggaagcgtttgatgtggtgggggagatc
gacgagacggtcaagaccggggtgtgggtcggagactgcttcatctacaccaacagtgtc
aaccgactcaactactacgtgggcggggaaatcgtcaccatagctcacctggacagaatg
atgtatctgctgggctacattcctaaagacaatcgtttgtacctgggggacaaagagctg
aacattgtcagtttctccctcctcgtctcggtgctcgagtaccaaacagctgtgatgaga
cgagactttgaaacagctgataaaatattacccatgattcccagagaacataggtcaagg
gtcgcccatttcctggagaaacaaggctttaaatctcaagcactggctgtgacctgtgac
cctgaacacaagtttgagttggccctgcagttgggagatctgaagacttgctaccagata
gccaaagaagccgagtcagaccagaagtggaagcagctagcagagctggccatcagtaag
tgtgagtttggactggcccaggagtgcctgcaccaggccagtgacttcgggggactgcta
ctgctggccagctcggccgggaacgctcagatggtggccaagctcggggacacggccgag
aaggctggccagaacaacgtggccttcctctcccactttgtcctgggaagattggaggaa
tgcctggaggtcctgattaacaccggtcgtctaccagaggctgcgttcttcgccagaaca
tacctgcctagtcaagtgtcaagagttgttgagttatggagagaacatttagcgaaagtc
aacaagaaagcagccaactctctggccgacccccaggaatacgagaacttgttcccggac
tggaaggacgcgctcaagaccgaggcttacctcagacctcagcggcagcgggcgatcgcg
gcagacaagttcccccgagtcccgccgaaccacgagaggacgccggtggaagagatgaag
gaggcggaggaacagggatcgtttacctttgtccacggaccaagtcaagatgaggttgac
gaggaggaattcgaggaagccccagacaccacagaacctgtcaaggaaccttcaccagcc
ccccagaagaaggcgaccccaccccctgatcccctccccagtaaaacagaaatggacgac
ctggaaaaggagctagagctggatctagaaaatatgaaccttgacaatgtggacacctca
gatccggccaatgaacaggacatcaatttagatgaggatttactggaagattaa
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