Crassostrea virginica (eastern oyster): 111133258
Help
Entry
111133258 CDS
T09197
Name
(RefSeq) E3 ubiquitin-protein ligase MIB2-like
KO
K10645
E3 ubiquitin-protein ligase mind-bomb [EC:
2.3.2.27
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvn04121
]
111133258
Enzymes [BR:
cvn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111133258
Ubiquitin system [BR:
cvn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111133258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
MIB_HERC2
Ank_4
SH3_15
Ank_5
Ank_3
zf-C3HC4_3
Ank_KRIT1
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
111133258
NCBI-ProteinID:
XP_022337172
UniProt:
A0A8B8E946
LinkDB
All DBs
Position
5:34849265..34857727
Genome browser
AA seq
860 aa
AA seq
DB search
MAGLRVVRGPDWNLGDSDGGEGHLGTVVEVREREGTASVVWDIGNTTTCRIGKDQQHDLI
VLDNAPIGIYFGKKKCSECQTEAFHGMCWECKDCTGCSICSICYFRGKHDTKHAFIRYTT
PNSPGMELQSRFSSLALSSMGMYPGAKVTRGKDWNYGDQDGGEGTLGTVRDIRSFKKDMS
HRNAVAVTWPSGKSYVYRVGFNGKVDLMCKEVARGFEYYRQHLPVLDYSMIKEQSSMSQS
TRVMVGDQVCITLSVRELKDAQRNFGGYHDEMESVIGKRGSIDGFTDSGGIIVKYQENRW
VFNPRALSKFWVANVGETVRVKDDQQKVEALQKGHGEWHPKMTKVLGKVGKIVRITPKKD
VVVSFGKKLWVFNIACLRPCPGAEVDQIEEEEDLTLSVATAGLANGLGLLLEQLRVLEAA
QRSRFSPEQFLKLAANGNDKLVSQMVKGEPDLCNRLIKGTTALIVASYEGQDGVVEILIS
NGANPNQTDENGNTALLASVSADKVNTVKILLKARCDVNAANKDGRTAIHVAARGGFEES
AKLLLAWKCKVNVKDVAENTPLHEAIDRGQDGIIVLLVDVKDIDFRIANKKGFNALMFAT
LRGNKIATNKITGKCPDMTNEPESKNSMTPLHIAAVNNRTEIATILLIQGRADTEKRNKD
GRTPLHLACIEAYYDMVKILLDHGASFSATDNEDNTALHCALGGVRSQPLVMLLMGHHVQ
TKTERVKIACMLIEFGAKIDLINKNGKQAIDLAEDDVKSAVQKHADSVLKRRQTSQGRDR
PNSGRRERAMFTQEMVVPCFVCFRQTGNVTTQPCGHRCLCPNCSFRVEECPVCLQRISRR
LDPQGRDVKQVTLEDLCKVQ
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggctgggcttcgtgtagtccgaggtccagattggaacctgggggacagtgacggaggg
gaggggcaccttgggacagtggtggaggtccgggagagggagggcaccgccagcgtggtg
tgggatattggaaacactaccacctgtcgtatcggcaaggatcaacaacacgacctgatt
gtgttggacaatgcacccattggaatttattttggaaaaaagaaatgctcagaatgtcag
acggaggcattccatggcatgtgctgggagtgcaaagattgcacaggctgctctatttgt
tccatttgttacttccgtggcaaacacgatacgaagcacgccttcatcagatacacaaca
cctaacagtcccggaatggagttgcaaagtcgattctctagtttggctttgagttccatg
ggaatgtatcctggtgccaaagtcacacgaggaaaggattggaattatggagaccaggat
ggcggagaggggacattgggaacggttcgagacattcgaagttttaagaaggacatgtca
caccgaaatgcagtggcagtcacatggccttctgggaaatcctatgtgtatcgagtggga
ttcaacggaaaggtggatctcatgtgcaaagaggtggcgaggggattcgagtattatcga
caacatctacctgttctagattacagtatgattaaggaacaatcctctatgtcacaatcc
acacgcgtcatggttggcgatcaagtctgcatcacgctatccgttcgagaattaaaagat
gcacaacggaacttcggtggctaccatgacgaaatggaaagcgtcattggtaagcgtggt
tcgattgatgggtttacagacagtggagggatcatcgtaaaataccaagaaaaccgatgg
gtctttaaccccagagctctcagcaaattttgggtagctaacgttggagaaaccgtaagg
gtcaaggacgaccaacaaaaagtggaggcccttcagaagggacatggcgaatggcaccct
aaaatgacgaaggttttgggcaaggtagggaagatagtgagaatcacgcccaaaaaggat
gtggtggtttcgtttggtaaaaagctctgggtgttcaatattgcatgtttgcggccttgt
cctggagctgaggttgaccaaattgaagaagaggaggacttgacgctgtccgtcgcgact
gctggactagccaatggacttgggttacttttagaacaacttcgggtgttagaagcagca
cagagatcaagattttctcccgaacaatttttaaaactggccgcaaacggcaatgataaa
ttagtatctcagatggttaaaggcgaaccagatctgtgcaacaggctgattaagggaaca
actgcgttgattgttgcgtcttacgagggtcaagacggtgtggtagagattctaatttct
aatggcgccaacccgaaccagacggatgaaaacggaaatactgcacttctagcgtctgtt
tctgcggataaagtcaatactgttaagattttactaaaagccagatgtgacgtaaatgcc
gcgaacaaagatggaagaaccgctatccacgtggccgctaggggaggatttgaggaatca
gccaaacttcttttagcctggaaatgtaaagtgaacgtcaaggatgtcgcagaaaatacg
ccccttcatgaagcgatcgacagaggacaagacggcatcatagttctccttgtggacgtc
aaggacattgatttcaggatagccaacaaaaaaggcttcaatgcgctcatgtttgctaca
ttacggggaaataagattgcaaccaataagataacaggaaaatgcccggatatgaccaat
gaacctgaatctaagaacagcatgacgcctctgcatattgctgcagtaaacaacaggaca
gaaatagcaaccattctgctaattcagggcagggcggatacagaaaagcggaacaaagat
gggcgcacacctctgcatttggcctgcatagaagcatactacgatatggttaaaatactt
cttgatcacggtgcctctttctctgccactgacaacgaggacaatacagccttgcactgc
gccctgggaggtgtacggtcccagccactggtaatgttgcttatgggacatcatgtacaa
accaagaccgaacgggtgaaaattgcttgcatgctgattgaatttggcgccaaaatcgac
cttatcaacaagaacggcaaacaggcaatcgatcttgccgaggatgacgtcaagtccgcc
gtgcaaaaacacgcggattctgtattaaagaggcgacaaacaagtcaaggccgcgatcga
ccgaactccggacgccgagagcgggcgatgtttacccaggaaatggtcgtcccatgcttc
gtctgtttccggcaaaccggaaatgtcaccacacaaccgtgcggacacagatgtttatgt
ccaaactgcagttttcgggtggaagaatgtcccgtttgcttacagaggattagccgaaga
cttgacccgcagggaagggatgtaaagcaggtgacgttagaagacctttgtaaggttcag
tga
DBGET
integrated database retrieval system
