Crassostrea virginica (eastern oyster): 111133259
Help
Entry
111133259 CDS
T09197
Name
(RefSeq) AP-1 complex subunit gamma-1-like isoform X1
KO
K12391
AP-1 complex subunit gamma-1
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
111133259
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111133259
Membrane trafficking [BR:
cvn04131
]
Endosome - Golgi transport
Others
AP-1 complex
111133259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Alpha_adaptinC2
Cnd1
INTS1_R4
Dicer_PBD
SDG2_C
Motif
Other DBs
NCBI-GeneID:
111133259
NCBI-ProteinID:
XP_022337173
UniProt:
A0A8B8EAM0
LinkDB
All DBs
Position
5:34832418..34848525
Genome browser
AA seq
828 aa
AA seq
DB search
MIRSLTMTTPKRLRDLIREIRSARTAADERAVVQKECAAIRDSFRDQDNTYKCRNLAKLL
YIHMLGYPAHFGQLECLKLVASSKFTDKRIGYLGAMLLLDERQDVHLLVTNSLKNDLNHQ
TQYIQSLALCTLGTICSVEMSRDLAGEIEKMIKSSNAYIKKKAILCAFCIIRKVPDLMEM
FIPATRSLLNEKNHGVLLTAVCLITEMCEKSPDTLHHFRKVVPMLVRILRNLIMAGYSPE
HDVFGVSNPFLQVKILRLLRILGKNDTDASETMNDILAQVATNTDTSKNVGHAILYEIVL
TIMGIKSEAGLRVLAVNILGRFLLNNDKNIRYVALNTLLRVVQADYNAVQRHRTTIIDCL
KDADISIRRRAMELSFALVNAGNIRGMMKELLDFLENCDPEFKADTCSKIVQSTEKYSPN
KRWHIDTVMKMLRVAGSYVRDDIVSILIQLIAETSELHNYTVQQLFLLIKDDITQPPLVQ
VALWCIGEYGEKLISGVCEEDEPVQVSEDEVIDVIEKVLTHNYSTEVSREYALTSLMKLS
SRFRIAVGRVKAVIDAYGGSTHVELQQRSVEYSNIFSRYENLRSALLEPMPLIEGSRSKN
VLANSESSDLLNEENIPNGEDTAEKAKNINNTESQNILDLLDVVPPSVTPANPAPPPAGG
ANDLLDLLGDVSNISNPAPPLKAAPAPNLLDDLMGGDTVHNNQMNGNDGPYKLTAFEKNG
LKVELTCERDNGQPNVTVINVNSTNSSATTMSEYVFQAAVPKSFQLQLQSPSGSTLPPMN
DGAVTQVIKVNNPQKQAIRLRIKVSYKQNGNTVTDIGEVSSFPSTLWQ
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgattcgctcattgacaatgacaacccctaagagactacgggatctcatccgagaaatc
cggtcagccagaacagcggcagatgagagagcagtggtgcagaaggaatgtgcagccatc
cgtgactctttcagggatcaagacaacacatacaaatgtcgcaatttggccaagttactc
tacattcatatgttgggttatcctgcacattttggtcagttggagtgtttgaagttagta
gcctcctcaaaatttacagacaagaggataggttatttgggtgctatgttgttattggat
gaaagacaagatgtccatttgttggtgactaattcattgaaaaatgatttaaatcatcag
acacagtatattcagagccttgcactatgtacacttggaacaatctgttcagtagagatg
agtagagatttagctggagaaattgaaaaaatgatcaagtcttcaaatgcctacatcaag
aagaaggcaatcttgtgtgccttctgcatcattcgcaaagtgccagatctgatggagatg
ttcattccagccacccgctccctactgaatgagaagaaccacggagtcttgttgacagcc
gtgtgtctgatcacagaaatgtgcgagaaaagccccgatacactgcatcatttcagaaag
gtggttcctatgcttgtacgcatcctcagaaatttgatcatggctggttattcccctgaa
catgatgtttttggtgtcagtaatccatttttacaggtgaagattctacgcttgcttcga
attctaggaaagaatgatacagatgccagtgaaactatgaatgatatcttggcacaggtt
gccaccaacactgacaccagtaaaaatgtaggccatgctattttgtatgaaattgtcctg
actatcatgggaatcaagtcagaagctgggctcagggttttagcagtaaatatccttgga
agatttctgctaaacaacgacaaaaatattagatatgtggcattaaacacacttttgagg
gttgtgcaagcagattacaatgcagttcagaggcacagaacaactattatagactgtttg
aaagatgcagatatttctattaggaggcgtgcaatggaactctccttcgcactagtcaat
gcaggaaacataaggggtatgatgaaggaacttttagactttctggaaaattgtgatcca
gaattcaaagcagacacttgctccaaaattgtccagtcaacggaaaaatactcacccaac
aagagatggcacattgacactgtgatgaaaatgctacgtgtagctggatcctatgtgagg
gatgatatagtgtcgatattaatccagttgatcgcagaaacatcagaactgcacaattac
actgtgcaacagctgttcttgttgatcaaagatgacatcacacagccacctctggtgcag
gtagcattgtggtgtattggagagtacggggagaaactgatctcaggtgtctgtgaagag
gatgaacctgttcaggtgtcggaggatgaggtgatcgatgtgatagagaaagtcctaact
cataactactctacagaggtcagcagagaatatgcgctgacaagtcttatgaagctaagt
tctcgattcaggattgcagtagggagagtcaaagctgtgatagatgcatatggaggttca
acacatgtagagcttcagcagcgatctgtcgagtattccaatatcttctctagatacgaa
aacctgaggtccgctttattagagccaatgccattaatagaaggtagcagaagcaagaat
gttttagccaattctgaatcgtctgatttacttaatgaggaaaatattcccaatggagaa
gatacagcagaaaaagccaaaaatatcaacaatactgaaagccagaatattttagattta
ttggatgttgttccccccagtgtcacaccagcaaacccagccccacccccggctggtggt
gccaatgacctactagatcttttgggagatgtatccaatatttcaaatccagctccacct
ctgaaggcggctcctgctccaaacttgttggatgatttgatgggtggggacacggtgcat
aataaccaaatgaatggaaatgatggtccctacaaacttacagcttttgagaagaatggt
cttaaggtggaattgacgtgtgagcgagacaatggtcaacccaatgtgactgtcatcaat
gtcaactcaaccaattcctcagccaccacaatgtcagaatacgtattccaagccgctgta
cctaagtcattccaactccaactgcagtcaccatctggcagtacactcccaccaatgaat
gatggagctgtcactcaagtcatcaaagttaataatcctcagaaacaagccataagatta
aggattaaagtgagctacaagcaaaatgggaacacagttacagacattggtgaagtgagt
tcttttccatcaacattatggcagtga
DBGET
integrated database retrieval system
