Crassostrea virginica (eastern oyster): 111133263
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Entry
111133263 CDS
T09197
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04137
Mitophagy - animal
cvn04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111133263
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
111133263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvn04121
]
111133263
Enzymes [BR:
cvn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
111133263
Ubiquitin system [BR:
cvn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111133263
Multi subunit type E3
ERAD complex
111133263
LMBR1L-GP78-UBAC2 complex
111133263
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-RING_11
zf-RING_5
zf-ANAPC11
Prok-RING_4
zf-RING_16
zf-C3HC4_4
zf-RING_Vps41
RING_XB3-XBAT31
zf-C3H2C3
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
111133263
NCBI-ProteinID:
XP_022337180
UniProt:
A0A8B8EAM6
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All DBs
Position
5:34873899..34889822
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AA seq
478 aa
AA seq
DB search
MPVILLERIPLPSLQTYTSVSVLILSVALYYAHHTVTTFDMDSMNTMDFGDEVTVEPMPD
DDVLTDAHDINATLPYDSVGWNMFHILTTEVWCVWILVNSAYCCLILIGKAIQKLVFGEL
RVSEEQHLKDKFWNFLFYKFIFIFGVMNVQTLEEVVSWVAWFTILGFFTLLTQLAKDRFE
YLSFSPIAARGVHLKLLSLLFVILLCSFALLFLSGYVGLHAGPTIFAFLAAECLLLGIRA
LYVVVRYVIHLWDMTISSVWENKSIYIYYTELGFELAALAVDFTHHLHMLLWGNIFLSMA
SLVICMQLRYLFYEFKRRINRHKNYRRVVQNMEARFPMATKDELQVHNDNCAVCWESMES
ARKLPCGHLFHNSCLTSWLEQDTSCPTCRTSLSEGQQVDPNSNVPDERGAAPPPQAQQQP
PQNHFTNHFFHFDGSRYVSWFPSFSVEVTHTQLLPGGRQRAIQTSQLDSMVKPVKLSL
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgatcttactggaaagaatcccgcttccaagcttacagacttacacatctgta
tccgtcctaatattgtcggttgcgttgtactatgctcaccacactgttactacatttgac
atggactctatgaacacgatggattttggcgatgaggttaccgttgaacccatgccagac
gatgatgtcctaacagatgcccacgatatcaatgcaactcttccctatgacagtgttggg
tggaatatgttccatatactaaccacagaagtctggtgtgtctggattttggtcaactct
gcttactgctgcttaatactcattggaaaagccatacagaaacttgtgtttggggagctt
agggtctcagaggaacagcacttgaaggacaagttttggaacttcctgttctacaagttt
atttttatcttcggggtgatgaacgtacaaaccctggaggaggttgtgtcatgggtggcc
tggttcaccatcctcggcttcttcacactcctcactcaactggctaaggacaggttcgaa
tatttgtccttctcccctattgctgcccgaggagtccatcttaagctgctcagcctctta
tttgtcattctgctgtgtagttttgccttactgttcctcagcggatatgttggccttcat
gcaggccccactatttttgccttcctcgctgcagagtgccttctcttgggcatcagggcc
ctatatgttgttgtaaggtatgtcatacatttgtgggacatgaccatctcaagtgtctgg
gagaacaaatctatttacatttactacaccgagctgggctttgaactagctgctttagct
gtggactttactcaccacctccacatgttgctgtggggaaatatatttctgagtatggca
agccttgttatctgtatgcagttgagatacttattttatgagttcaagaggaggatcaat
cgtcataagaactatcgaagggttgtccaaaatatggaagcaagatttccaatggcaact
aaggatgaacttcaagtacacaatgacaactgcgctgtttgttgggagagcatggaatcg
gccaggaaacttccctgcggacatttgtttcacaattcttgtttgacatcatggcttgaa
caagacacttcgtgtccaacatgtcgcacatcactgagtgagggacaacaagtggacccc
aacagtaatgtccctgatgagcggggcgctgcacctccaccacaagcccagcagcagcca
ccacagaaccactttacaaaccatttcttccattttgatgggtctcgctatgtcagctgg
ttccccagtttttcggtggaggtgacccacacccagctgttacccggaggcagacagagg
gctatacagacctctcagttggacagcatggtaaaacctgtcaagttatctttatga
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