Crassostrea virginica (eastern oyster): 111133337
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Entry
111133337 CDS
T09197
Name
(RefSeq) non-homologous end-joining factor 1-like
KO
K10980
non-homologous end-joining factor 1
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
111133337
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvn03400
]
111133337
DNA repair and recombination proteins [BR:
cvn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
111133337
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
XLF
XLF_CC
Motif
Other DBs
NCBI-GeneID:
111133337
NCBI-ProteinID:
XP_022337348
UniProt:
A0A8B8ECS4
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All DBs
Position
5:complement(12699167..12700499)
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AA seq
327 aa
AA seq
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MSEVEWRRKWKPDLKACPWQPITIGNQQFLFKCKYTHDSYELLITNNCHFWCEHLEGDEL
ESRTISLNPNVKATPTRILDEIQNCLENPSKKTADIVKMNLNKLIIHVDSQLAGMAFVWE
FKCQQADSEMISENFNIPLLAMVAELSRRNDELVKVIDAKDREIDDYKSQGAKASRKHIE
TSTFVRTAFENNMIMSKEFEQEVKRLGLSGFSEDNQDLYRQIMTRYAYLTRPVTADETDE
DSVNEQKTPSLNSWETSRLPASLTDKSPEKTSPGSSPRKSPAKGSSSTETSPAKDTEMMR
RQALERKLEDEERKKNEPKKKKKKIAF
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagttgagtggagaagaaagtggaaaccggacttaaaagcctgtccatggcag
ccaattacaatcggcaatcaacagtttctatttaaatgtaaatatacgcatgattcttac
gagcttttgattacaaacaactgccatttttggtgcgaacatttagagggagatgaactt
gaaagtagaaccatatctctgaatccaaatgttaaggcaaccccgaccaggattctggat
gaaatacagaactgtttagagaatccctcaaagaaaacagctgatattgtcaaaatgaat
ctgaataagctgattatacatgttgattcacaactggcaggcatggcgtttgtctgggag
tttaaatgtcagcaggcagacagtgaaatgatttccgagaatttcaatattccattgctt
gctatggttgcagaattatctcgcaggaatgatgagttggttaaagtcatagatgcaaaa
gacagagaaattgacgactacaaatctcagggagccaaggcctcacgcaagcacatagaa
acatctacgtttgtgaggacagcattcgaaaacaacatgattatgtccaaagaatttgag
caggaggtgaagagacttggattatcagggttttctgaagacaaccaggacctgtatcga
cagataatgacacggtatgcttatttgaccagaccagtcactgctgatgaaacagacgag
gactctgtcaatgagcagaagacaccctcattaaactcatgggagaccagcagattaccc
gcatcgctgaccgacaagagtcccgaaaaaacttctccgggcagttcacctcggaagagt
ccggccaaaggcagcagctccacagaaacctccccagcgaaggacacggagatgatgagg
aggcaggccctggagaggaagttagaggatgaagagaggaagaagaatgaaccaaagaaa
aagaagaagaagattgccttctga
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integrated database retrieval system
