Crassostrea virginica (eastern oyster): 111133398
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Entry
111133398 CDS
T09197
Name
(RefSeq) uncharacterized protein LOC111133398 isoform X1
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn00511
Other glycan degradation
cvn00513
Various types of N-glycan biosynthesis
cvn00520
Amino sugar and nucleotide sugar metabolism
cvn00531
Glycosaminoglycan degradation
cvn00600
Sphingolipid metabolism
cvn00603
Glycosphingolipid biosynthesis - globo and isoglobo series
cvn00604
Glycosphingolipid biosynthesis - ganglio series
cvn01100
Metabolic pathways
cvn04142
Lysosome
Module
cvn_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
111133398
09103 Lipid metabolism
00600 Sphingolipid metabolism
111133398
09107 Glycan biosynthesis and metabolism
00513 Various types of N-glycan biosynthesis
111133398
00531 Glycosaminoglycan degradation
111133398
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
111133398
00604 Glycosphingolipid biosynthesis - ganglio series
111133398
00511 Other glycan degradation
111133398
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
111133398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
cvn03110
]
111133398
Enzymes [BR:
cvn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
111133398
Chaperones and folding catalysts [BR:
cvn03110
]
Intramolecular chaperones
Others
111133398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
SNCAIP_SNCA_bd
Motif
Other DBs
NCBI-GeneID:
111133398
NCBI-ProteinID:
XP_022337469
EnsemblRapid:
LOC111133398
UniProt:
A0A8B8ED61
LinkDB
All DBs
Position
5:complement(57170158..57212298)
Genome browser
AA seq
996 aa
AA seq
DB search
MKLFCHLACGILLLLTVSCDPVPQGQVNALQGGEDQKGLSGIHDTGLNKVNNDQKLANQA
IASATKSPKRRKRKKHRNVAANNVVVPKENIPNVLGKTAKPAEKDPVFNVQDIVKKAKED
SLKETTKNPGVPQMRMNGAGQPQKVEGIPVQAFTAEAKAGNVGGGNVNYNQNLGVVNQNN
GLQNHDSQQNAKLPEPGNVQVVNANSVDQVANNLNKAHQEIGQGNVQSNNIQNQPQVETY
NNNNNIVNNNNVNNMQVNNNNNFNNNNNNNNNYNNFNNNNNGFGQPAVNSDNQRLQGMKD
SLKIVWDWSDFLINYEQYVMPEQKNRRAPQATTGEPWPLPQYYVAKATKVYKIDKEKFRF
NIIKESCDIIQKAVERYRDMILEDTIMEMYNNLQHAQGTSIHDISQKYNDDTYVKAPVIS
VVNVKIRRPCTKFPNDQMDESYDVFVKKTGSYIWANEVWGALRGLETFSQLVFRGTDNML
YIKDTVINDYPRFPHRGIHIDSSRHFIFKEVIYDVLEGMAQNKMNVMHWHIVDDQSFPYQ
SKAFPELSEKGAYHPSFVYTPEDIADIIEYARMRGIRVMPEFDTPGHTYSWGLSHPEHLT
QCYQGAHPVSGYLGPLDPSKNSTYRFLKTFFNEVLHVFEDQYIHLGGDEVPMTCWSSNPD
VLKLLNQLNGKPNEPINLQNVDPYMYSYDIRKVLEFYEQRLTQDLKDLGRNRKNGVRMVM
WQEIMNNNIQLPNDTIIQIWQGDMGDVQRAIDMGYHALYSTCWYLDLIEYGTKWPKYYTC
DPADSSMGYQIDEKKVLGGEAALWAEYIDNENLISTLWPRASAPAERLWSSKDVRDVEAA
GKRLQEHRCRMLSRGLTVGQISGPDYCLRRGHRRDGERVHNCTGDRCNLVQIEKFNFHVQ
QRGRGMAECNQMLAQGGSVVTALVLILVLGAVIFSLKMSGTRIVHLKVCRNRSIFLSFIL
LIVIYFMCYTSLWMQVQEFRGSFEKRIKSYSDHRYN
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcttctgtcacctagcttgtggaatactactgctactgacggtgtcctgtgac
cccgtcccccagggtcaagtgaatgctttacaagggggtgaagaccagaagggtcttagt
ggaatccatgacacaggactgaacaaggtaaataatgaccagaaattggccaatcaggca
atagcaagtgctaccaagtcccccaaacgtaggaagaggaaaaagcaccgtaatgttgcc
gccaataacgttgttgtaccaaaggaaaacattccaaatgtgttgggaaagactgctaaa
ccagcagaaaaagacccagtgtttaatgtgcaggatattgtgaagaaagccaaggaagac
agtttaaaagaaaccacaaaaaacccgggggtgccccagatgagaatgaacggtgctggt
cagccgcaaaaagtggaaggcatccctgtgcaggctttcacagctgaagccaaagcaggg
aatgtggggggtgggaatgtgaattataatcaaaatcttggtgtagttaatcagaataat
ggactgcaaaatcatgacagtcagcaaaatgcgaaacttccagagcccggaaatgttcag
gtggttaatgcaaactctgtggatcaagtggcaaataatctgaataaagcccatcaggag
atagggcaaggaaatgtccaaagtaataatatccaaaaccagccacaagtggaaacatat
aacaacaataacaatattgtgaataataataatgtgaataacatgcaggtgaataacaac
aacaattttaataacaacaacaacaacaacaacaactataataatttcaataacaataat
aatggttttggtcaacccgcggtaaattctgacaaccagcgattgcaggggatgaaggat
agcctgaagattgtgtgggattggagcgatttcctcatcaactatgaacagtatgtcatg
ccggagcagaagaaccgcagggcaccgcaagcaaccacaggggagccatggccactgcca
caatattatgtggcaaaagccaccaaagtctacaagattgacaaggaaaaattccgattt
aatatcatcaaggagtcgtgtgatatcatacagaaagcagtggagcggtatcgtgatatg
attctggaggatacgatcatggaaatgtataataatttacagcatgcacagggaaccagt
attcacgacatcagtcagaagtacaatgacgacacgtatgtcaaggcaccggtcatttct
gtagtcaacgtgaagatccgcagaccttgcaccaagtttcccaatgatcagatggatgag
tcttatgacgtctttgtgaagaagacaggatcgtacatctgggcaaatgaagtttgggga
gcactacgagggttggagacgttcagtcagctggtgttcagaggcacagataatatgcta
tacatcaaagacacagtgattaatgattacccacgattccctcatcgtggaattcatatt
gactcttcaagacatttcatcttcaaagaagtcatctacgatgttctggagggtatggcc
cagaataagatgaatgtcatgcattggcacatcgtggatgaccagtcatttccttaccaa
agcaaggccttcccagaactcagtgaaaagggggcctatcaccctagctttgtgtatacc
ccagaggacatcgccgatatcattgaatacgccagaatgaggggaatacgtgtgatgcca
gaatttgatactccaggccacacctactcctgggggttgagtcaccctgagcacctgacc
cagtgctaccagggagctcaccccgtcagtgggtacctaggacctctggaccccagcaag
aacagcacctaccgcttcctcaagaccttcttcaatgaggtcctccacgtctttgaagat
cagtacattcacctgggtggagatgaggtccccatgacttgttggtcctccaatcctgat
gtcctgaaattgttgaatcagctgaatgggaaaccaaacgaaccaattaatctgcagaat
gttgacccgtacatgtacagttacgacatccgcaaagttctggaattctacgaacaaagg
ttgactcaagacttgaaggaccttggaagaaacaggaaaaatggagtgagaatggtcatg
tggcaggaaatcatgaataacaatattcagctgcccaatgacacaataatccagatctgg
cagggagacatgggtgacgtacagcgggcgatcgacatgggctaccacgccctctactcc
acctgctggtacctggatctgatcgagtacggcaccaagtggcccaaatactacacctgt
gatccggccgacagctccatgggctaccagattgatgagaagaaagttttgggtggagag
gcagctctatgggcagaatacattgacaacgaaaacttgatctccacgctgtggccccga
gcctcggcccctgcagaaaggttatggagcagcaaggacgtccgcgatgtggaggcagca
gggaagaggcttcaggaacatcgctgtcgcatgctcagtcgcggtttgacggtgggacag
atcagcggcccggactactgcctgaggcgcggacatcgcagggacggggagcgggtccac
aactgtaccggcgaccgctgtaacctggtacagatcgaaaagtttaattttcatgtacag
caacgcggccgtggtatggcagagtgcaaccaaatgctggctcaaggaggaagtgtggtc
acggccctggtgttgattctggttttgggggcggtgatcttcagccttaagatgagtggc
actcgcatcgtgcatctgaaggtctgccgcaatcgcagcatcttcctctccttcatcctc
ctcatcgtcatctacttcatgtgctacacctctctctggatgcaggtgcaagagttcaga
gggtcatttgagaagcggatcaagtcttattcagaccatcggtataactga
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