Crassostrea virginica (eastern oyster): 111133444
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Entry
111133444 CDS
T09197
Name
(RefSeq) beta-hexosaminidase subunit beta-like
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn00511
Other glycan degradation
cvn00513
Various types of N-glycan biosynthesis
cvn00520
Amino sugar and nucleotide sugar metabolism
cvn00531
Glycosaminoglycan degradation
cvn00600
Sphingolipid metabolism
cvn00603
Glycosphingolipid biosynthesis - globo and isoglobo series
cvn00604
Glycosphingolipid biosynthesis - ganglio series
cvn01100
Metabolic pathways
cvn04142
Lysosome
Module
cvn_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
111133444
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
111133444
00513 Various types of N-glycan biosynthesis
111133444
00531 Glycosaminoglycan degradation
111133444
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
111133444
00604 Glycosphingolipid biosynthesis - ganglio series
111133444
00511 Other glycan degradation
111133444
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
111133444
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
cvn03110
]
111133444
Enzymes [BR:
cvn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
111133444
Chaperones and folding catalysts [BR:
cvn03110
]
Intramolecular chaperones
Others
111133444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Dimer_Tnp_hAT
Motif
Other DBs
NCBI-GeneID:
111133444
NCBI-ProteinID:
XP_022337585
UniProt:
A0A8B8EBU4
LinkDB
All DBs
Position
5:25732922..25756857
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AA seq
653 aa
AA seq
DB search
MRINTHTWIYSIQDKKYTGAMRTDCGFICILCALEIVRTTGPAADSKSPHGKGPATQDWM
EMSHEYVENPLILPEIPVGWDQKDFKLNFHGDPLKFKLRRAPIPTIGSPWPKPQKHVKDS
KVLYRLRKDRLVIKRTEIECPTLQEGIERYKEQIFTCLNYSHDNNLRNIYDRDLRKTMIS
SKRLLGEIPLLTLLIVNITRCSFWPSLESNESYQLSSTADGIELLAEDVWGALRGLETLS
QIIFCSQNTILIRKTKIEDFPRFRHRGIMVDTARHYIEKETLFQIMRGMEMNKFNVLHWH
ITDDQSFPYESRTFPELSKKGAFHPLLVYSQTDIKDILEFGRQRGIRVVPEIDTPAHVFS
WSFGKPELLTQCYNSGEIVPALMGPLNPARNSTYSFLQDLYKEILSVFKDQLVHIGGDEV
PFQCWYSNPEVVNFAKHLAKQFGRRTTDMKSVLKYFTKRFVDGILKEAASRKNKVRLMVW
EDSFSKDLFLPENTVVQLWYTGTQVIPDIVRRNLSVVFSSCWYVDLVGPGIKWHKFYNCD
PEGPRSIPGVLGGEVCAWGEHITNEDILLRIWPISSAAAERLWSAKSVTNVEEAAPRLEE
HRCRMLRRGFQLAVPAAPGSVKPNTPLNQNSHKIDEKLILIMLPKSSIFAIRV
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgaggattaacacacatacctggatttattcaattcaagacaaaaagtataccggagca
atgaggacagattgtggatttatttgcattttgtgtgcgttggaaattgtcaggacaact
ggaccagcagctgattctaaaagtcctcacggaaaaggcccagctacacaagattggatg
gaaatgtcacatgaatatgtggagaatccattaatacttcctgaaatacctgttggatgg
gatcaaaaggacttcaaattgaattttcatggagaccctcttaaattcaaactacgtaga
gcgccgattcctaccattggttctccatggccaaaaccccagaagcacgtcaaggattcc
aaagtattgtatcgtcttaggaaagatcgcctggtcataaaaagaaccgaaatagaatgt
cccactctacaagaagggattgaacgttacaaggagcaaatcttcacttgcttaaattac
tcgcatgacaataatctaagaaatatttatgacagagatcttaggaaaacaatgatatca
tcaaaaaggcttttgggggaaataccattgttaactttgctaatcgttaacataacgagg
tgttcattttggccttctttggagtctaatgaatcatatcaattatccagtacagctgat
ggtattgaactccttgcggaggatgtgtggggcgctctcagaggacttgaaacactcagt
caaattatattttgcagtcaaaacacgatattgattcggaagactaaaatcgaagatttc
cctcgttttcgtcatcgaggtatcatggttgatacagcccggcattatattgaaaaggaa
acacttttccagataatgagagggatggagatgaacaaatttaatgtccttcattggcat
attacagatgatcaatcgtttccctatgaaagtcgaacttttcctgagctcagtaaaaag
ggagcctttcatccattattagtgtattcgcaaactgacatcaaagatatactggagttt
ggaaggcaaagagggattcgagtcgttccagaaatcgatactcccgctcatgtcttctcc
tggagtttcggtaaacctgagcttctgactcaatgttacaattctggggaaattgtgcca
gccctgatgggacctttgaatcctgctcgtaactctacttacagttttctacaagatttg
tataaggaaatcctcagcgtattcaaggatcaactagtccatattggtggtgatgaagtg
ccttttcaatgctggtattcaaatcccgaagttgtaaattttgccaagcatctagctaag
caatttggaagaagaaccaccgatatgaagagtgtcctgaaatacttcacaaaaagattt
gtcgatggaatactgaaagaagctgcaagcagaaaaaacaaagtccgcttaatggtttgg
gaagattccttcagcaaagacttatttcttccagagaacaccgtggtacagctgtggtac
actggaacgcaggtcattccggacatagtgcggagaaacctgtccgtggtcttctcgtct
tgttggtatgtcgatctggtggggccggggataaaatggcacaagttctacaactgtgac
cccgagggtcctcgttccattcccggtgttttgggaggagaagtatgtgcgtggggcgaa
cacataacaaacgaggacattttacttcgaatttggcctatttcgtcagcggcagcggag
agattgtggagtgctaagtctgtgacaaacgtagaggaggcggcgcctcgccttgaggaa
cacagatgtcgaatgctaaggagagggttccagttagcagtgccagcggccccgggttct
gtgaaaccaaacacgcctctaaaccagaacagtcacaaaatagacgagaaattaatatta
attatgctccccaaaagcagtatatttgcaataagagtctga
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