Crassostrea virginica (eastern oyster): 111133504
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Entry
111133504 CDS
T09197
Name
(RefSeq) tRNA pseudouridine synthase A, mitochondrial-like
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cvn03016
]
111133504
Enzymes [BR:
cvn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
111133504
Transfer RNA biogenesis [BR:
cvn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
111133504
Prokaryotic type
111133504
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
111133504
NCBI-ProteinID:
XP_022337665
UniProt:
A0A8B8EC21
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Position
5:complement(69704165..69719469)
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AA seq
490 aa
AA seq
DB search
MIKRTIQRLHNSIAAIMSNLPAPSPDCLKRKTEDQKDDAEFVPKKSKTIKKEPVPQMQGN
PNAKRKVAVLIAYNGKGYHGIQRNPPYPSIEEEILKALLALKAITQEHYDKPSSIGFQRA
ARTDKHVSAASNILSLKMVTNIENFLDEVNAILPNQIKIFGFKRTTKGFDCKTQCTGRTY
MYVLPTYALAPVETVVTDQYRVTDEVLARVNEILKLYIGTHNFHNFTSGIKPTERRAYRY
IISFECGKPFVREGLEFVTCKVRGQSFMLHHIRKMIGLMIAIVKGYCKDDVLQLSWGPEK
VDVPKAPGLGLLLDELYFDGYNKKWGRDGLHEPIEWSDYEEELEKFKEEYILPEIYKGEK
KDRVMWDWLKTLHMHSFDVESKNTRRHRNQSPDSGENTLDAGDEVEAQEKVLKPPKTDSE
STEDLVSIAEQGELTKETVSANSTEKIRGALESGCTKTMGDNSVLDSEVGQEVQEVNQES
ASECQKLGQR
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagcggacaatccagaggctccataattctatcgctgcaatcatgagtaacttg
ccagcaccttcacctgactgtttgaagcgaaaaacagaggatcaaaaagacgatgccgaa
tttgtacccaaaaaatcaaagaccattaaaaaggaacctgttccacagatgcaaggaaat
cccaatgctaaaagaaaagttgcagtcttgatagcttataatggcaaaggatatcatggt
attcaaagaaacccaccttatccctcgatagaggaggaaatactgaaagctctcctggct
ctgaaggctattacacaggaacattatgacaaacctagttctataggtttccagagggca
gccagaacggacaaacatgtctcagctgctagtaacatactctcattaaagatggtgaca
aatattgagaactttttggatgaggtgaatgccatactaccaaaccagattaagattttc
gggttcaagaggaccacaaaaggatttgactgtaaaacacagtgcacaggtcgcacatac
atgtatgtccttcccacgtacgctcttgctccagtggaaacggttgtgacagaccaatac
agagtcacagatgaagttcttgctcgagtcaatgaaattctcaagttatacatagggacc
cacaactttcacaatttcacatcaggcataaaaccaactgagaggagagcttacagatac
attatcagttttgagtgtggaaagccatttgtaagagagggactagagttcgtaacctgt
aaggttagaggtcagagcttcatgttacatcatatcaggaaaatgataggtctgatgatt
gccattgtaaaagggtactgcaaagatgatgttcttcagttatcctggggaccagaaaag
gtagatgttccaaaggctccaggattgggtttgctgttggatgagctgtattttgatggc
tataacaaaaaatggggaagagatggtctacatgaaccaatagagtggtctgattatgag
gaagaattggaaaagtttaaagaagaatacattttgcctgaaatttacaaaggagagaaa
aaggacagagtaatgtgggattggttgaaaacattgcatatgcattcattcgatgtggaa
agcaagaatactagaaggcacagaaatcagagtccggactcgggagaaaacaccctggat
gcgggagatgaggttgaggctcaggagaaagttctcaaaccaccaaagacagactcggaa
tcaacggaggatttagtttctatagcagagcaaggggaattaactaaagaaaccgtgagt
gctaactcaacggaaaaaatacgtggagctctggaaagtggatgcacaaaaacaatggga
gataacagtgtactagactctgaagtcggtcaagaggtccaggaggttaatcaggaatcg
gcctcggaatgtcagaaactcggacagagatga
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