KEGG   Crassostrea virginica (eastern oyster): 111133565
Entry
111133565         CDS       T09197                                 
Name
(RefSeq) protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
cvn  Crassostrea virginica (eastern oyster)
Pathway
cvn03013  Nucleocytoplasmic transport
cvn04141  Protein processing in endoplasmic reticulum
cvn04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:cvn00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    111133565
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    111133565
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    111133565
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cvn03019]
    111133565
   04131 Membrane trafficking [BR:cvn04131]
    111133565
Messenger RNA biogenesis [BR:cvn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     111133565
Membrane trafficking [BR:cvn04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    111133565
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    111133565
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    111133565
SSDB
Motif
Pfam: WD40 ANAPC4_WD40
Other DBs
NCBI-GeneID: 111133565
NCBI-ProteinID: XP_022337753
EnsemblRapid: LOC111133565
UniProt: A0A8B8AZY8
LinkDB
Position
5:complement(81067787..81074096)
AA seq 312 aa
MVSVINSIDTSHEDMIHDAQLDYYGTKLATCSSDRSIKIFDVKGGQQTLITELRGHDGPV
WQLAWAHPMFGNLIASCSYDRKVIIWKETSGSWGKLYEYQNHDSSVNSVNFAPHEFGLLL
ACGSSDGSISIISSSGDGTWDAKKIPNAHSIGCNAVSWAPAINPGDLLDPSGRHQPIKQL
VSGGCDNLVKIWKEEDGQWKEDQKLEGHSDWVRDVAWAPSIGLPKSIIASCSQDLRVIIW
TNDGNGWTQKVLHKFNDVIWHISWSITGNILATSGGDNKVSLWKETLNGDWVCISDVNKG
QGQISDGQRSLS
NT seq 939 nt   +upstreamnt  +downstreamnt
atggtgtctgttatcaactccattgacacctctcatgaggatatgattcatgatgctcaa
ctggactattatggaacaaaactggccacctgctcatcagacagatcaatcaagattttt
gacgtgaaaggtggacaacagactctgattacagagctaagaggacacgacggacccgtc
tggcagcttgcgtgggcccaccccatgttcggcaatctgatcgcatcgtgtagctatgat
cgtaaagtcatcatctggaaggagaccagtggatcgtgggggaaactgtacgagtatcag
aaccacgactcctcagtgaactcggtgaactttgccccccatgagtttggactcctcttg
gcctgtgggagttctgacggctccatctccatcatatccagctcaggtgatggaacttgg
gatgcaaaaaaaattccaaacgctcattctattggttgtaatgcagttagctgggcccca
gccatcaatcctggcgatctattggatccctccggaaggcatcaaccgatcaaacaactc
gtctctggaggctgcgacaacctagtcaaaatttggaaggaggaggatggtcagtggaag
gaggatcagaagcttgaaggtcacagtgactgggtcagggacgtcgcctgggcacccagt
ataggtctgcccaaaagcatcatcgcaagttgttcacaggatttgcgtgtgattatttgg
accaacgacgggaatggttggactcagaaagtgttacacaaatttaacgacgtcatctgg
cacatcagctggtccattactggcaacatactggccacttctggaggcgataacaaagtc
agcctgtggaaggagacattgaatggagactgggtgtgtatcagtgatgtgaacaaaggt
caaggacaaatttctgacggccagaggtcgttgtcatag

DBGET integrated database retrieval system