Crassostrea virginica (eastern oyster): 111133565
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Entry
111133565 CDS
T09197
Name
(RefSeq) protein SEC13 homolog
KO
K14004
protein transport protein SEC13
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03013
Nucleocytoplasmic transport
cvn04141
Protein processing in endoplasmic reticulum
cvn04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111133565
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111133565
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
111133565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvn03019
]
111133565
04131 Membrane trafficking [BR:
cvn04131
]
111133565
Messenger RNA biogenesis [BR:
cvn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111133565
Membrane trafficking [BR:
cvn04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
111133565
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
111133565
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
111133565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
111133565
NCBI-ProteinID:
XP_022337753
EnsemblRapid:
LOC111133565
UniProt:
A0A8B8AZY8
LinkDB
All DBs
Position
5:complement(81067787..81074096)
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AA seq
312 aa
AA seq
DB search
MVSVINSIDTSHEDMIHDAQLDYYGTKLATCSSDRSIKIFDVKGGQQTLITELRGHDGPV
WQLAWAHPMFGNLIASCSYDRKVIIWKETSGSWGKLYEYQNHDSSVNSVNFAPHEFGLLL
ACGSSDGSISIISSSGDGTWDAKKIPNAHSIGCNAVSWAPAINPGDLLDPSGRHQPIKQL
VSGGCDNLVKIWKEEDGQWKEDQKLEGHSDWVRDVAWAPSIGLPKSIIASCSQDLRVIIW
TNDGNGWTQKVLHKFNDVIWHISWSITGNILATSGGDNKVSLWKETLNGDWVCISDVNKG
QGQISDGQRSLS
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctgttatcaactccattgacacctctcatgaggatatgattcatgatgctcaa
ctggactattatggaacaaaactggccacctgctcatcagacagatcaatcaagattttt
gacgtgaaaggtggacaacagactctgattacagagctaagaggacacgacggacccgtc
tggcagcttgcgtgggcccaccccatgttcggcaatctgatcgcatcgtgtagctatgat
cgtaaagtcatcatctggaaggagaccagtggatcgtgggggaaactgtacgagtatcag
aaccacgactcctcagtgaactcggtgaactttgccccccatgagtttggactcctcttg
gcctgtgggagttctgacggctccatctccatcatatccagctcaggtgatggaacttgg
gatgcaaaaaaaattccaaacgctcattctattggttgtaatgcagttagctgggcccca
gccatcaatcctggcgatctattggatccctccggaaggcatcaaccgatcaaacaactc
gtctctggaggctgcgacaacctagtcaaaatttggaaggaggaggatggtcagtggaag
gaggatcagaagcttgaaggtcacagtgactgggtcagggacgtcgcctgggcacccagt
ataggtctgcccaaaagcatcatcgcaagttgttcacaggatttgcgtgtgattatttgg
accaacgacgggaatggttggactcagaaagtgttacacaaatttaacgacgtcatctgg
cacatcagctggtccattactggcaacatactggccacttctggaggcgataacaaagtc
agcctgtggaaggagacattgaatggagactgggtgtgtatcagtgatgtgaacaaaggt
caaggacaaatttctgacggccagaggtcgttgtcatag
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