Crassostrea virginica (eastern oyster): 111133682
Help
Entry
111133682 CDS
T09197
Name
(RefSeq) double-strand-break repair protein rad21 homolog isoform X1
KO
K06670
cohesin complex subunit SCC1
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvn03036
]
111133682
Chromosome and associated proteins [BR:
cvn03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
111133682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
SMC_ScpA
Motif
Other DBs
NCBI-GeneID:
111133682
NCBI-ProteinID:
XP_022337993
UniProt:
A0A8B8EEN9
LinkDB
All DBs
Position
1:complement(62637697..62649547)
Genome browser
AA seq
669 aa
AA seq
DB search
MFYAHFVLSKKGPLARIWLAAHWDKKLTKAHVFETNIDSSVEAIMQPKVKLALRTSGHLL
LGVVRIYSRKAKYLLADCNEAFVKIKMAFRPGVVDLPEENREAAVAAITLQENFHDFDTT
LADLNDLDMHAQFSVNQSRPEDITMREDLSSIAFVGDDDFGDVGFDDREILRDASGIDDS
LYTNRSSIRPVEPDEKTLNEHTSEKPMDVDLNPAVDTDDFGGPVDGGFMDDDHEHDDDDD
DDGGFGGGVDQEFFGNDFMNGGGLFEDAPLPVGEVSMPAPVEAQKPEEPKDAPSNETTNT
TSATEPTMIHNAPGTSGEQTTLINNEEEAFALPPLDATLFPGAEKKKRKRKLIVDEQKGF
PSETMKLQLSDTSDIITTLDLAPPTKKLMHWKETGGVEKLFALPGRPIISKTASKLFSRN
LITRQVKEEEESDQDRLDLEATELLREEQERSAAAPIQEVSTILEEPSVLEESATSTRTK
RRERQSLKSPKPVPTPSREPDLSLNNTTNPQFSNTFTEAPIDLPGGPPSLLNPHLDPYET
EPPSLAPFSVPPPSVPPQSVPPPSVLPHDAPSFNAEAEGDTEAMPENEEQEEKRWTKRTQ
LMQHSLDVAFRYKNTLSFKEMSRNLNRKQACSKFYTLLVLKKYQAIEVQQPQEFGDIYID
KGPKFGMIC
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgttttatgctcactttgtcctgagcaaaaagggtcccttagcccgaatttggttggcc
gcccactgggacaagaaactcaccaaagcccatgtgtttgaaacaaatatagatagcagt
gttgaagccatcatgcaaccaaaggtgaaacttgctctgcgaacatcaggtcacttgtta
ttgggagttgtgaggatttattctcggaaggcaaagtacctgttagcagattgtaatgaa
gcttttgtgaagatcaaaatggccttccgaccaggggtggtggatctcccagaggaaaat
cgtgaagctgccgtggcagccattactctacaggagaacttccatgactttgatactact
cttgctgatctcaatgacctggatatgcatgcacagttctcagtgaatcagagtcgtcct
gaggacatcacaatgagagaggacctatccagtatagcatttgttggagatgatgatttt
ggggatgttggcttcgatgatcgggaaattcttcgagatgcctctggaatagatgactct
ctctacacaaaccgcagcagcatacgtcctgtggagcctgatgaaaagacattgaatgag
cacacatcagagaagcccatggatgtagatctgaaccctgctgtagacacggatgacttt
gggggacctgtggatggagggtttatggatgatgaccatgaacacgatgatgatgacgac
gatgatggtgggtttggcggaggtgtagatcaggaattttttggtaatgacttcatgaac
ggtggaggattgtttgaggatgcacctctaccagttggtgaggtctccatgccagcccct
gtagaagcacaaaagccagaagaaccaaaagatgctccaagcaatgaaactaccaataca
acctcagccacagaacccaccatgattcacaatgcccccgggacatcaggggagcaaacc
actcttatcaacaatgaagaggaggcatttgcattgcctccattagatgccacactcttc
cctggggctgagaaaaagaagaggaaaaggaagttgatagtagatgaacagaaaggattt
cccagtgaaaccatgaaactccagttgtcagatacttctgacattataaccacattggat
ctggctccaccaaccaagaaattgatgcactggaaggaaacaggtggtgtggagaagctg
tttgcccttccaggaagacctattatatctaaaactgcttctaagctcttctcacgaaat
ttgattactcgacaagtgaaggaggaggaggaatcggaccaggatagactggacctggag
gccacagagctactgagggaggagcaagagagatcagcagcagcaccaattcaggaagtg
agcacaatcctcgaggaaccttcagttctggaggaatcagccacaagcacaagaacaaaa
cgacgggagaggcagtcgctgaagtcacccaaaccagtccccactccttccagagaaccg
gacctctccctgaacaacaccacaaacccccagttctccaacaccttcacagaggcccca
atagacctgccaggaggacccccatccctacttaaccctcacttagatccgtatgagaca
gagccaccctctctagctccattttcagtacctcctcctagtgtcccaccccagtctgtt
cccccaccttcagtacttccacacgatgcaccgtcattcaatgcggaggctgagggcgac
accgaagccatgcctgagaacgaggagcaggaggagaagaggtggaccaagaggacccag
ctcatgcagcactcactggatgtggcatttagatacaagaacactctcagctttaaggaa
atgtctagaaacttaaacagaaaacaggcgtgctcaaaattctacacactcttagttctt
aaaaaataccaggctattgaagtacagcaaccccaggagtttggagacatttacatagac
aaaggaccgaagtttggcatgatctgctga
DBGET
integrated database retrieval system
