Crassostrea virginica (eastern oyster): 111133722
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Entry
111133722 CDS
T09197
Name
(RefSeq) toll-like receptor 3
KO
K18808
toll-like receptor 13
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cvn04054
]
111133722
Pattern recognition receptors [BR:
cvn04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
111133722
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GFIT
Motif
Pfam:
LRR_8
TIR
TIR_2
LRR_4
LRR_1
LRR_9
Motif
Other DBs
NCBI-GeneID:
111133722
NCBI-ProteinID:
XP_022338049
UniProt:
A0A8B8EEE3
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Position
5:8998592..9002222
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AA seq
700 aa
AA seq
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MSSFYFYWTAILVINLILNTNCCLSNLCPETPCYCINETADCSYRNLQSLTGLKNHLPVH
IKVLDLSGNTFKNITKNFFQPIASLKLEKLNLNNSGIQCVPDFQFPSIKVLDLSRNNLTY
KTIKEVLDSLRGSPIQILDVSDVKDGIGRLSNVTFESLENCPLESLHLRHWNLVNIPDGT
FSNLGKLETLDLSNNKIMGMTMRGLHNLKNLNLTLNELSAVPRMCDVNNKSLVPYLENLQ
LAINHISDSLQFKREGHCLTSLVHLNLSFNAISILKSKAFSTLTNLSTLRLDYMLTYDLF
IEKNAFMSKSLTELGVGSNKRVTKEMLQYKDIFKNSNNIKILDMSYFDFSTFSDEDFCIM
LSWLHNLENIRLRYCLFNSVPFISHLYKLKSLNLNGNYIRHVHKDSFRNNSKLNTIILRK
NQLTSIHEDSFTKAIWNNPDLRIDVSFNPFACDCDLEWFITWARTNKRKIINYAESQCDS
PKEWKGNPIEENVQKLERTCHDLNRIVVTAITIGSFVFIFLFIFVLIRKLRWDILYYLHN
CTSRRHGYQRLSEKSEKEYDAFVAYNTHDRKWIMSELVESLEKKEGYKLCLHERNFLPIG
SHVDNIFENIEASRNLILVLSNNFMEDQWCQFETIIANHKLADGNKDNIFLILLDGIDSN
KNFTIALKTLLKEVQNVEWTTNANGRKLFWKRLKSFMDKH
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcattttatttttattggacggcgatcttggttataaacctcattctcaataca
aactgttgtctgtcaaacctgtgtcccgaaacaccgtgctattgtataaatgaaactgcg
gactgctcctacagaaacttacaatcattgacgggtcttaaaaatcaccttccagttcat
ataaaagtgctcgatctctcaggaaacacttttaaaaacataacaaagaatttctttcaa
ccaattgcttccttaaaattagagaagttaaatcttaacaacagtggaatacaatgtgta
ccagatttccagtttccttcaatcaaagttctggatctctcgaggaataatctaacttat
aaaactattaaagaagtccttgatagtctcaggggctcaccgatacagattcttgacgta
tccgacgttaaggacggaataggacgtctttcaaacgttactttcgagagtttagaaaac
tgccctcttgagtctcttcatctacgacactggaacttggtaaacatacctgacggaacc
ttcagtaatctagggaagttggaaactttagaccttagtaataacaaaataatgggtatg
acaatgagaggacttcataatcttaaaaacttaaacctaacgttgaatgaactttccgcc
gttccaaggatgtgcgatgtcaataacaagtcccttgtaccttatctagagaatctgcag
cttgccatcaatcatatttcggactctctgcagttcaaaagggaaggccattgtttgaca
tcgctagtgcatctcaatttatcattcaatgctataagtattttaaaatctaaagcattt
tcaaccttgactaacctgagcacattgcgtctggattacatgttgacctatgacctcttc
atcgagaaaaacgcttttatgtccaaatctctgacagagctcggcgttggaagtaacaag
agagtcactaaggaaatgttgcaatataaggacatttttaaaaacagcaacaatatcaag
atcttggacatgtcgtatttcgacttctccacatttagtgatgaagatttttgtatcatg
ctctcgtggttacataatctagagaacatcagactgcgctactgtttgtttaattctgtt
cctttcatatcacatctctacaaactcaagtcgttaaatttgaatggtaattacatccgt
catgtccacaaagattcgtttcgaaataattcaaaactcaatactatcattctacgaaaa
aatcaacttacctcgattcatgaggattcgtttacaaaagccatctggaataacccagac
ttgcgcatagatgtgtctttcaacccctttgcatgtgactgtgatctagaatggttcatt
acatgggcaaggacaaacaaaaggaaaattataaattatgccgaaagccagtgcgattca
ccgaaagagtggaaaggaaatccgatagaagaaaatgtgcaaaaacttgaaaggacttgt
cacgatttgaatcgaattgttgtaactgcaataacgatagggtcttttgtcttcattttc
ctcttcattttcgtacttataagaaaattaaggtgggatatcttgtattatttgcataac
tgtacgagcagaagacatggataccaaagactttctgaaaaatctgagaaagaatatgac
gcttttgtcgcttacaatacgcatgatcggaaatggattatgtcggagcttgtggaaagt
ttggagaaaaaagaaggctacaaattatgtctccatgaaaggaattttttaccaataggc
tcacatgtggacaatatttttgagaacattgaggctagtagaaatctcatattggttctt
tcgaataattttatggaagaccaatggtgtcaatttgaaaccattattgccaatcataag
ttagctgacggaaataaggataatatttttcttattcttttggacggtatagattctaat
aagaatttcacgatagcactcaaaacgctattaaaagaagttcaaaatgtagaatggacc
actaatgcaaacggacgaaagctgttctggaaaagattaaaatcatttatggataaacat
tga
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