Crassostrea virginica (eastern oyster): 111134017
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Entry
111134017 CDS
T09197
Name
(RefSeq) sonic hedgehog protein-like
KO
K11988
sonic hedgehog
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cvn01002
]
111134017
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cvn00536
]
111134017
Peptidases and inhibitors [BR:
cvn01002
]
Cysteine peptidases
Family C46: hedgehog family
111134017
Glycosaminoglycan binding proteins [BR:
cvn00536
]
Heparan sulfate / Heparin
Morphogens
111134017
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Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Motif
Other DBs
NCBI-GeneID:
111134017
NCBI-ProteinID:
XP_022338493
UniProt:
A0A8B8EEH1
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Position
1:complement(33560870..33616353)
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AA seq
407 aa
AA seq
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MRSPALLTPLQTAVLAFLILTGPSLQCASPRGSGRRLRMGNRTPLVYKQHVPNVSENTLG
ASGLAEGRINKEDPRFKKLVTNDNPDIIFRDEEGDGSDRIMTQRCKDKLKILAISVMNTW
QGVKLRVTEAWDDDGHHAKDSLHYEGRAVDITTSDKDRAKYGMLAKLAVEAGFDWVYFES
RGHIHCSVKSDSSAAIKIGGCFPPLATVYTEHSGTINMEDLRVGEKVLSLMADGVLGYSE
VVSFLDRDDKRTGMYFSITTRDLRTITLTDKHLIYTSTTNSSSIESYVANYAQTVQVGQF
VLINDNNSEPRPSQVTNVTSHTLSGVYAPLTYDGTIVVNGVVTSCYGIINSERIAHLSCS
PFRWMHTISKYIPFISRDTEQDGIHWYAEFLYSVGRIFLSPDLLYIV
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgcgctctccagcgcttctcaccccgctacaaacagcagtgcttgcgtttctcatactg
accggaccctccttacagtgcgcctccccacgagggtcggggcggcggctccggatgggc
aataggactcctctagtgtataaacaacatgttccaaacgtgtcggaaaataccctggga
gccagcggattggcggaaggtcgaatcaacaaggaggaccccaggttcaaaaaactggtc
acaaatgataaccccgacatcattttccgggatgaagaaggcgatggttccgatagaatc
atgacacagagatgcaaggataagttgaaaattttggccatctcggtaatgaacacgtgg
cagggagtgaagctgcgagtgacagaggcttgggacgatgacggacaccacgccaaggac
tccctccactacgagggtcgggccgtggacatcaccaccagcgacaaagatcgcgccaag
tacggcatgctagccaagctggcggtggaggctggattcgactgggtgtactttgagtcc
aggggccatattcactgttccgttaaatcagattcatctgctgccattaagatcggagga
tgtttcccgccattagctacagtgtacaccgaacacagcggaacgataaatatggaggat
cttcgagtgggagaaaaggttctcagtttaatggcggacggagtccttggttacagcgag
gtggtttccttccttgaccgagacgacaagcgaactggaatgtacttttctataacgaca
cgtgatctacgaacgataactcttactgacaaacatcttatatatacttctactacgaat
tcatcgtcaatcgaatcctatgttgcaaattacgcacaaacagttcaagttggtcagttt
gttttaattaatgacaataacagtgaacccagaccgtcacaagtgactaacgtgacgtca
cacactttgagtggtgtttacgcaccactgacgtacgacggaaccattgttgtaaatgga
gttgttacgtcatgttacggtatcatcaatagtgagcgcatcgcacatttatcctgtagc
cctttccgttggatgcacactatatcaaaatacattcctttcatatcacgtgatacggaa
caagatggcatccactggtatgccgagtttctgtactcagtcggtagaattttccttagt
ccggatttgctctacattgtctga
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