KEGG   Crassostrea virginica (eastern oyster): 111134103
Entry
111134103         CDS       T09197                                 
Name
(RefSeq) coatomer subunit beta'-like
  KO
K17302  coatomer subunit beta'
Organism
cvn  Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:cvn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cvn04131]
    111134103
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cvn04147]
    111134103
Membrane trafficking [BR:cvn04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    111134103
Exosome [BR:cvn04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   111134103
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_HPS5 PEP5_VPS11_N Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_Vps41 WD40_RFWD3 Beta-prop_DCAF12 Beta-prop_LRRK2 Beta-prop_WDR35_TULP_N Clathrin
Other DBs
NCBI-GeneID: 111134103
NCBI-ProteinID: XP_022338617
UniProt: A0A8B8ED83
LinkDB
Position
5:complement(1550016..1559279)
AA seq 904 aa
MPLRLDIKRKLSARSDRVKCVDLHPTEPWMLASLYNGNVHVWNHESQQLIKSFEVCDLPV
RNSRFVPRKNWVITGSDDMQLRVFNYNTLERVHQFEAHSDYIRCIAVHPTQPFIISSSDD
MLIKLWDWEKKWTCTQVFEGHSHYVMQIVINPKDNNTFASASLDRTVKVWQLGSNTPNFT
LEGHEKGVNCVDYYSGGDKPYLISGADDRLIKIWDYQNKTCVQTLEGHAQNISAVAFHPE
LPIIMTGSEDGTVRIWHANTYRLESTLNYGLERVWTIAAQKGSNNVALGYDEGSIIIKLG
REEPAMSMDSSGKIIWAKHAEIQQANIKAIGDQDVKDGERLPLAVKDMGSCEIYPQTVAH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWSSDSSVYATRESTSSVKIFKNFKE
QKAFKPEFGAEGIYGGYLLGTRSVSGLAFYDWESTDLIRRIEITPKNVYWSENGELCCIT
TEESFFVLKYSSEAVEKARENREEIGEDGIEEAFDVVGEIDETVKTGVWVGDCFIYTNSV
NRLNYYVGGEIVTIAHLDRMMYLLGYIPKDNRLYLGDKELNIVSFSLLVSVLEYQTAVMR
RDFETADKILPMIPREHRSRVAHFLEKQGFKSQALAVTCDPEHKFELALQLGDLKTCYQI
AKEAESDQKWKQLAELAISKCEFGLAQECLHQASDFGGLLLLASSAGNAQMVAKLGDTAE
KAGQNNVAFLSHFVLGRLEECLEVLINTGRLPEAAFFARTYLPSQVSRVVELWREHLAKV
NKKAANSLADPQEYENLFPDWKDALKTEAYLRPQRQRAIAADKFPRVPPNHERTPVEEMK
EAEEQGSFTFVHGPSQDEVDEEEFEEAPDTTEPVKEPSPAPRRRRPHPLIPSPVKQKWTT
WKRS
NT seq 2715 nt   +upstreamnt  +downstreamnt
atgcctcttcgacttgatatcaagcgaaaattatcagcgcgttcagaccgagtcaaatgt
gtggacctacaccctactgaaccatggatgctagcgagtttatacaatggaaatgtccat
gtttggaatcacgagtctcagcaactgatcaaatcatttgaggtgtgtgacttacctgtc
aggaattccaggtttgtcccaaggaagaactgggtcatcacaggctcggatgacatgcag
cttcgagtgtttaactacaacacgttggagcgagttcatcagtttgaggcccattcagat
tacatcagatgcattgctgtccatcccacccagcccttcattatcagcagtagtgatgac
atgttgattaagctgtgggactgggagaagaaatggacgtgtacccaggtgtttgagggc
cactcccactacgtgatgcaaatcgtcatcaaccccaaagacaacaataccttcgccagt
gcttctctggacagaacagtcaaggtctggcagctggggtctaacactcctaacttcacc
ctggagggccacgagaagggagtgaattgtgtagattactattcagggggagacaaaccc
tacctgatatctggagcggatgacagactgatcaagatctgggattaccagaacaagacc
tgtgtgcaaactctagagggacacgcccagaacatctcagccgtggcctttcacccggaa
ctcccaatcataatgacggggtccgaggatggtactgtacgaatctggcacgccaacacc
taccgactggagagcacactgaattacggcctggagcgggtgtggacgattgctgcccag
aagggatccaacaatgtcgcccttggatacgacgaaggaagcatcatcatcaagcttggt
cgtgaagaaccagcgatgtccatggacagcagtggaaaaattatctgggccaagcacgct
gagatccagcaggccaacatcaaggccatcggagaccaggatgtgaaggacggagagcgg
ctccctctggcggtcaaagacatgggcagctgtgagatctaccctcagaccgtggctcac
aaccccaacggaaggttcgtggtggtgtgcggggatggggaatacattatctacacagcc
atggctcttagaaacaaaagttttggatccgcccaggagtttgtgtggagtagcgactcc
tcggtgtatgctaccagggagtccaccagctccgtcaaaatcttcaagaacttcaaggaa
cagaaggcattcaaaccagaatttggagctgaggggatttacggagggtacctgttgggc
actcgatcagtgagtggtctggctttttacgactgggagtctacagatctcatcaggaga
atagaaatcacaccaaaaaatgtatactggagtgagaacggcgagttgtgctgcatcacc
acggaggagtcgttctttgtcctgaagtacagctccgaggcagtggagaaggctcgggag
aaccgcgaggagattggagaggatggaatagaggaagcgtttgatgtggtgggggagatc
gacgagacggtcaagaccggggtgtgggtcggagactgcttcatctacaccaacagtgtc
aaccgactcaactactacgtgggcggggaaatcgtcaccatagctcacctggacagaatg
atgtatctgctgggctacattcctaaagacaatcgtttgtacctgggggacaaagagctg
aacattgtcagtttctccctcctcgtctcggtgctcgagtaccaaacagctgtgatgaga
cgagactttgaaacagctgataaaatattacccatgattcccagagaacataggtcaagg
gtcgcccatttcctggagaaacaaggctttaaatctcaagcactggctgtgacctgtgac
cctgaacacaagtttgagttggccctgcagttgggagatctgaagacttgctaccagata
gccaaagaagccgagtcagaccagaagtggaagcagctagcggagctggccatcagtaag
tgtgagtttggactggcccaggagtgcctgcaccaggccagtgacttcgggggactgcta
ctgctggccagctcggccgggaacgctcagatggtggccaagctcggggacacggccgag
aaggctggccagaacaacgtggccttcctctcccactttgtcctgggaagattggaggaa
tgcctggaggtcctgattaacaccggtcgtctaccagaggctgcgttcttcgccagaaca
tacctgcctagtcaagtgtcaagagttgttgagttatggagagaacatttagcgaaagtc
aacaagaaagcagccaactctctggccgacccccaggaatacgagaacttgttcccggac
tggaaggacgcgctcaagacggaggcttacctcagacctcagcggcagcgggcgatcgcg
gcagacaagttcccccgagtcccgccgaaccacgagaggacgccggtggaagagatgaag
gaggcggaggaacagggatcgtttacctttgtccacggaccaagtcaagatgaggtcgac
gaggaggaattcgaggaagccccagacaccacagaacctgtcaaggaaccttcaccagcc
cccagaagaaggcgaccccaccccctgatcccctccccagtaaaacagaaatggacgacc
tggaaaaggagctag

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