Crassostrea virginica (eastern oyster): 111134136
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Entry
111134136 CDS
T09197
Name
(RefSeq) DNA polymerase nu-like isoform X1
KO
K16618
DNA polymerase nu [EC:
2.7.7.7
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
111134136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvn03400
]
111134136
Enzymes [BR:
cvn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
111134136
DNA repair and recombination proteins [BR:
cvn03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
A-family DNA polymerase
111134136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_P_Exo
PAP_fibrillin
Motif
Other DBs
NCBI-GeneID:
111134136
NCBI-ProteinID:
XP_022338669
UniProt:
A0A8B8EG43
LinkDB
All DBs
Position
5:72210667..72225370
Genome browser
AA seq
1043 aa
AA seq
DB search
MEKTIVLKPKKPAPVLKKWSELSFDAQCVLKAVQKQKSEDSYHQKGVSNYYKEIYRKKFC
GSSLPQDDSQLKIKAEKLHGIDYQPPEMCLPHRQVHFDYDSGFNRDRRFKSCQLLSDSGQ
FAFERENERYGAIFEESKQPMANAFIRNNQNVDSSLLMQRQPASSPLLDTSKNCSSSYAE
NTMVYRSDFYKVDKEMKNYTVDPAAVKTFSFIQPMSVAYGNDAATRFSSNFPLSSMDHGA
TGKLPSDSQSLCFSDDQVLAIKHGSEFLRKPGSDLQLQGKENIQENLCHFLEEKEGTPCG
TTPKRDMSISSKIARRLYEHKNRRQEDRDIEVESHQERIDDTNARKLATKISKKSLPEYS
VPYKKKRDNDKGKQQSACKSNSQGSFSNHNVDMMSESERKNVFEKFLHSKETAITLLYLD
GSTQLRENVDINIKKKSNTVKVKPDSRHTQVSGIFMRCGIDPEEENRDVLYIPKHARDVT
IQGQIKEFLKDFIKSGGMKVCYGAKDLLIVLLKFLDNTEYCQQYLLDSNVCDPLVAEWLL
NPDKSTSTFQQMLMDHNIKRKSLSIEHLGDHSTSDDMDMLLELIHRQFKILSSNNLMQLF
MKIETKLTPVLAMMDTRKIKVSTDTMLKFSNILQKKMESLEEKAHKIVGHSFSISSPAQI
RQVIFEELKLHTRLAGHTKLAKTAVNHQLSTSESVLTHLSDLHPLPAVILEYRQVQKLKS
TYIDGMMGAVVDGYLWTHWDQTSAATGRLSSHSPNIQAIPKTASSITISHTAKECIMGYT
GTEGKTVDIYARDSFVSHEGWSFLSADFQQIELRLLAHLANDSTLLQLFNRHCEKDIFKE
LTAQWLQKLPDEVTSIEREQTKRIVYSVMYGAGKEKLAEYLKITPSDAKNIIDSFLVSFP
AVSHFSRKCIEFCRQKGYTESIFKRRRRITNICHPSPPLRAQAERKAVNFCVQGSAADIC
KAAMLQVENTLQQHSELQVRLLVQIHDELLFEIPDELLSRAGAVIKSVMEDRDSLCSGFV
QLKVPLRVSLYAGKTWGHMTPLQ
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggagaagacaatagttttgaagccgaagaaacctgctccagttctgaagaaatggtct
gaattatcatttgatgctcagtgtgttttaaaagcagtccaaaagcaaaagtccgaagat
tcgtatcaccaaaaaggtgtttcaaattattacaaagaaatatataggaagaagttttgt
ggcagttcgttaccacaagatgacagtcaactcaagataaaagctgaaaaattacatggc
attgattatcaaccaccagaaatgtgtcttcctcataggcaagttcactttgactatgat
agtggttttaacagagacagaagatttaaatcttgtcaacttttgagtgattcaggacaa
tttgcatttgaaagagaaaatgaaagatacggagctatttttgaagaatcaaaacagcca
atggcaaatgcttttattcgtaacaatcagaatgtggattcaagtcttctcatgcaaaga
cagccagcctcgagccctctcttggataccagtaagaattgctcttctagctatgctgaa
aataccatggtttacagatcagatttctacaaagtagacaaagaaatgaagaattataca
gtggatcctgctgctgttaaaactttctcatttatccaaccaatgtctgttgcttatggt
aatgatgctgccactcggttcagcagtaattttccattatcttcaatggatcatggagcc
acaggaaaactgcccagtgattcccagtctctatgcttttctgatgatcaagtacttgca
attaaacatggatctgaatttctaagaaaacctgggtcagatttacaactgcaaggaaaa
gaaaatattcaggagaatttgtgtcattttttggaggaaaaggaaggaacaccatgtggc
actactccaaagagagacatgagcatcagctcaaaaattgccaggagattgtatgagcac
aagaatagaaggcaggaagatcgagatattgaggtggaaagtcatcaagaacgtattgat
gatactaatgcacgaaaattagctactaaaatatctaagaaaagtctgcctgaatactct
gtcccttacaagaaaaagagagataatgataaaggaaagcaacagagtgcttgcaaatca
aactcacagggaagtttcagtaatcacaatgtggatatgatgtctgagagtgagcggaaa
aatgtgtttgaaaagttcctccatagtaaggagacggccatcactcttctgtacttggat
ggctcaactcagctgagagaaaatgttgacatcaatatcaagaagaaaagtaacacagtg
aaggtaaaacccgattcaagacacactcaggtttcagggatatttatgaggtgtggaata
gacccagaagaagaaaatagagatgtactctacatacccaaacatgcaagagatgtcaca
attcaaggacagatcaaagaatttttaaaggacttcatcaaaagtggagggatgaaagtt
tgctatggtgctaaagaccttctgattgtgctgttaaagttcctagataatactgaatat
tgtcagcaatatctgctggattccaatgtgtgtgaccctcttgtggcagagtggttgtta
aatccagataaatcaacatcaacatttcagcaaatgcttatggatcacaatatcaaacga
aagtctttgtctattgagcaccttggagaccattcaacttctgatgatatggacatgtta
ctggagctaattcataggcaattcaaaatccttagttccaacaacctgatgcagctcttc
atgaaaatagaaaccaaattaacacctgtgctggccatgatggacaccagaaaaattaaa
gtttctacagacaccatgctgaaattctccaatattttgcagaaaaagatggagtccttg
gaagagaaggcacataaaattgtggggcattcattttctatctccagtcctgcccagatt
cgacaggttatttttgaagaacttaagcttcataccagactagctggacatacaaaactg
gccaaaactgcagtgaaccatcagttgtctacctcagaatctgtactgactcatctctct
gacctccatcctcttcctgcagtcatactggaatatagacaggttcaaaaattaaaatct
acctacattgatgggatgatgggtgctgtagttgatggatacctttggacacactgggat
caaacctcggcagccaccggtcgactctcttcccactccccaaacatccaagccatcccc
aaaactgccagctccatcacaatctcccatacagctaaggaatgcattatgggatacaca
ggtactgaagggaagactgtggacatatatgccagggattcctttgtcagtcatgagggg
tggtcatttttatctgcagatttccagcaaatagaactaagacttctagctcatttggca
aatgattccactttacttcagttgttcaatcgacattgtgaaaaagacattttcaaagaa
cttacagctcagtggctgcagaagttgcctgatgaggttacctccattgaacgggaacaa
acaaagagaatagtgtactcagtgatgtacggagcaggaaaagaaaaactagctgaatac
ttgaagattacaccctcagatgctaagaatatcatagatagcttcttagtttcctttcct
gctgtaagtcatttttccaggaaatgtattgagttttgcagacaaaaaggatatacagag
tctatttttaaaagaaggaggagaataacaaacatttgccacccttctcctccactacgg
gctcaagctgaacggaaagctgtcaacttctgtgttcaaggttctgctgctgacatttgc
aaggctgcaatgctgcaggtggaaaataccctacaacaacattcagaactacaagtcaga
cttttggttcaaatccatgatgaattgttgtttgaaataccagatgagctgttatccaga
gctggagctgtaatcaagtcagtgatggaagacagggatagcttgtgtagcggctttgtt
caacttaaagttcccctccgagtgtcgctgtatgcgggcaagacatggggtcacatgact
ccgctacagtag
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