Crassostrea virginica (eastern oyster): 111134300
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Entry
111134300 CDS
T09197
Name
(RefSeq) protein retinal degeneration B-like isoform X1
KO
K24069
membrane-associated phosphatidylinositol transfer protein
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111134300
Membrane trafficking [BR:
cvn04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
111134300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IP_trans
LNS2_PITM1-3
PITM1-3
DDHD
LNS2
Acid_phosphat_B
APP1_cat
Motif
Other DBs
NCBI-GeneID:
111134300
NCBI-ProteinID:
XP_022338908
UniProt:
A0A8B8EE24
LinkDB
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Position
5:10236041..10266876
Genome browser
AA seq
1307 aa
AA seq
DB search
MLIKEYRISLPMSVDEYRIAQLYMIQRKSREESHGEGSGVEIIENEPYENGPGGKGQYTY
KIYHVGSHLPGWFRAILPKSALRVEEEAWNAYPYTKTRYKCPFVEKLYLEIETRYLNDAG
ETDNVFNLTSSELKNRVVDYLDIVKDPISSGDYKKEEDPKLFISEKTKRGPLTDNWLAEY
ARDSKIPGKKKCVMTAYKLCRVEFKYWGMQNKIERFIHDIGLRKTMLRAHRQAWCWQDEY
YGLQLSDIRRLERETQLALAEKMKMVSTEDEGEDNAEEAPKTPKIPISTSFEQAAAIKRQ
TPEQNLGRVTPEGRKMSSGAIHKRSLSGSTKHKVGSFHDVSTSRMFESLEQLQESSSDEE
EFFDAKGHLTPKDEGNFWSDEGSERPSSSGMIGFGDEEERRDSRSEQVTSGDEYADARSI
TSEDNIDTSLGKKVEHFRQHFNAEQSKDVSPPPSAGCKTNILFLVLHGGNLLDMHIDHVQ
ASKRSDFSTVKSTFEQVMRTHYPGAVGHIAFRLVSCPQICTDTVNLLASLSPYGLDAQTP
KSQDASLWTQDFVPLGAIALFASSNPDYHESVNKMVAKANLVYQDFLISGEGKGFNGQVC
LLADSTASIMAYDALTQASLHCGRGLSTYDSNNSLNTETTVRSSVVKPAEPRHLLSLSDP
DLSQNCEIKDCACNTSMADKQFSKSDIVSTDYKLRRQNSAQRQSGTYLNVSDPPEHIRRT
STGSNYDGTYFKLDFEVSEFFMLGAPLGLLLAYRRITCGEDSPPQGPMCNQVYNLFHSSD
PAAMRLEPLIHDSFKHIPPVKISRYSKFPLGDGEPIHVVETVQSNLSLFTNRRYSSGPFL
QRQGSITSNISQMSGLGESTVSFITNVTSRWWGNKRVDYVLYCPEVLHSFPVSALPHLFH
ASFWESSDVTSFILRQVLRYDVSLLEASYDNLDLQSSLTGKASREKWLKRRTTIKVKNLQ
PNHRGNDIMVLEDRPQVISARFMYGSFDVTSLSGEKVDVHVMDQLNGEWQYMGTEVTDKN
GKLQFTIPASKSLPQGMHPVKVVVRGDHSSADFYLCVLPPKTETVIFSIDGSFTASMSIS
GKDPKVRPGAVDVVRHWQEHGYLIVYVTARPDMQHKKVVSWLAKHNFPHGMVAFMDGLSK
EPLKQKLAYLKTLQTEAQILFKAGYGSSKDIYVYKELGLSPQQTYIVGKSSKKQMSQAQV
LSEGYAAHLSDLRIPGSTRQAVGNARLFIQKGSFTKTFQSEGKKALKRVPSNPTPAGDFV
NKHDALLHTTISVGPEGHTIIQQGGASTVRTRGTSPKPKIILKDVPR
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcaaggagtatcgtatctccctgccaatgagtgtggatgaatatcggatagct
cagctttacatgatacagaggaagagccgtgaggagagtcacggagaaggcagtggggtg
gagatcattgaaaatgaaccatatgagaatggtcctgggggaaaaggacagtatacctat
aaaatctaccatgttggcagccacttaccaggttggtttcgtgcaatcttgcccaagtct
gcgctgcgtgtggaggaggaggcgtggaatgcctacccctacaccaagactcgctacaag
tgccccttcgtggagaaactctacctggagattgagaccaggtacctgaacgatgctggc
gagacagataatgtattcaacctgacttcatcggaactcaagaacagggtcgtggactat
ttagacattgtgaaggaccccatttccagtggagactacaaaaaagaggaggatccaaag
ctgtttatctcagagaagacaaagcgtggaccgttgacagacaactggttagcagaatat
gcccgtgactccaaaattcctggcaagaagaagtgtgtcatgactgcttataaactctgt
cgtgtggagttcaagtactggggaatgcagaacaaaatagagaggtttatacatgacata
ggtctgaggaagaccatgcttcgggcgcatcgccaggcctggtgctggcaggatgagtac
tatggtctccaactcagtgacattcgccgactggagagagaaacacagttagcccttgcc
gaaaaaatgaaaatggtgtctacagaagatgaaggcgaggacaatgctgaagaggctcca
aagacacctaagatacccatttctacatcctttgagcaggcagcagccattaagaggcag
actcctgaacagaacttggggagagtcaccccagagggcaggaagatgtcttctggggcc
atacacaagcgctctctcagcggctcaactaaacacaaagttggatcatttcatgatgtt
tccacttcacgcatgtttgagagtttggaacagcttcaggaatcgagttccgatgaagag
gaattctttgatgccaagggccatctgactcccaaggatgagggcaacttctggtcagat
gaggggtcagaacgcccctcaagctcaggcatgattggatttggagatgaggaagagaga
cgcgattctcgctcagaacaagtcaccagtggagatgagtacgcagatgctcgctcgatc
acatccgaggacaatatagacacttctcttggcaagaaggttgaacactttaggcaacat
ttcaatgctgagcagagcaaggatgtgtccccaccaccttctgcaggctgtaaaactaac
atcctttttctggtgctgcacggaggaaacctgcttgacatgcatattgaccatgtacaa
gcttccaagagaagcgacttcagcacagtcaagtcaacgtttgagcaagtgatgagaacc
cactaccctggtgctgtgggccacattgccttccgactggtctcctgtccccagatatgt
accgacacagtcaacctccttgctagcctgagtccctatggattggatgcccagacccct
aagtcccaagatgcctcgctttggacccaagactttgttcctctgggagccattgcatta
tttgcttcctctaaccctgattaccatgagtctgtcaacaaaatggtagccaaggctaac
ctggtctatcaggatttccttatctcaggagaaggcaagggattcaatggacaggtgtgt
ctgttggcagattcgacagcctctatcatggcttatgatgccctgacccaggccagtctc
cactgtgggcgaggccttagtacgtacgacagtaacaacagtctgaacaccgagaccact
gtacggagctcggtcgtcaagcccgcagagcccaggcatctcttgagtctgagtgatcct
gacctctcccaaaactgtgagatcaaggactgtgcttgtaacacctccatggctgacaag
cagtttagtaagagtgatattgtgtcaacagactataaattgaggcgtcagaactctgcc
cagagacaatcaggaacatatttgaatgtgagtgatccccctgagcacattcgacgcacc
agcacgggcagtaactacgacggcacatatttcaagttagactttgaagtgtcagaattc
tttatgttaggggctcccctaggactgttactggcctacagaagaataacctgtggggag
gactccccgccccaagggcctatgtgcaatcaagtgtacaatttgttccactctagtgac
cctgcagcaatgaggctggagcctctcattcacgactctttcaaacatatcccaccagta
aagatctcccgctacagcaagtttccccttggtgatggcgagcccattcatgtagttgag
acggtacagagtaacttgagcctgtttacaaatcggcgatattcatctggtccctttctc
cagagacaggggagcattaccagtaacatctctcagatgtccgggcttggcgagtccacc
gtctcatttatcactaacgtgaccagtcggtggtgggggaacaagagagtggattatgtg
ttgtactgccccgaggtcctccactccttcccagtctccgccctcccacatctgttccat
gccagcttctgggaatcgtccgatgtcacttctttcatcctgcgacaggttttgaggtat
gatgtttccctgttagaggcttcttatgataatcttgatctacaatctagtctgactgga
aaggcctccagagaaaaatggttaaaacggagaactacaattaaagttaagaatttacag
ccaaaccacagaggaaatgacatcatggttttggaagacagacctcaggtcatctcagcg
agattcatgtatgggtcgtttgatgtgacgtctctgtccggagagaaggtggatgttcac
gtcatggaccagcttaacggggagtggcagtacatggggacagaggtcacggataaaaat
ggcaaactgcagttcacgattccagccagcaaaagtctgccacagggcatgcacccagtc
aaagtggtagtcaggggcgatcatagctcggctgacttttacctgtgtgtgctgccccct
aagacagagacagtcatctttagtatagatggctccttcactgccagcatgtcgatatca
gggaaggatcccaaagtcagaccgggggcggtagatgttgtcagacactggcaagagcat
ggctacctcattgtgtatgtgacagcacgcccagacatgcagcataagaaggttgtctcc
tggctggccaagcacaactttccccacgggatggtggcgttcatggatggcttgtccaag
gagccactcaaacagaagctagcttacctcaagactctccaaaccgaagctcagatcctc
ttcaaagctggctatggatccagtaaggatatctatgtgtacaaagagttaggactcagt
ccacaacagacatacatagttggaaagtcttccaagaaacagatgtcccaagcccaggtc
ctgagtgaaggatatgctgcccatttaagcgaccttagaattcctgggagcactaggcaa
gcagtgggaaatgctaggctcttcattcagaagggctccttcaccaagacattccagtcg
gaagggaagaaggcgctgaagagagtgccatccaaccccacccctgctggggactttgtc
aataagcacgatgcactcctacacaccacaatatcagtggggccggagggacacaccatt
atacaacaaggtggtgctagcactgtcagaactaggggaacatctccaaagccaaaaatt
atactcaaggatgttcctagatag
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