Crassostrea virginica (eastern oyster): 111134525
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Entry
111134525 CDS
T09197
Name
(RefSeq) lysosome-associated membrane glycoprotein 1-like
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03272
Virion - Hepatitis viruses
cvn03273
Virion - Lassa virus and SFTS virus
cvn04140
Autophagy - animal
cvn04142
Lysosome
cvn04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
111134525
03272 Virion - Hepatitis viruses
111134525
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
111134525
04142 Lysosome
111134525
04140 Autophagy - animal
111134525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111134525
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvn04147
]
111134525
04090 CD molecules [BR:
cvn04090
]
111134525
Membrane trafficking [BR:
cvn04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
111134525
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
111134525
Other autophagy associated proteins
RNautophagy/DNautophagy
111134525
Exosome [BR:
cvn04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
111134525
CD molecules [BR:
cvn04090
]
Proteins
111134525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
CTV_P6
Motif
Other DBs
NCBI-GeneID:
111134525
NCBI-ProteinID:
XP_022339347
UniProt:
A0A8B8EFD0
LinkDB
All DBs
Position
5:67475306..67490005
Genome browser
AA seq
645 aa
AA seq
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MKAKFIGAVLLCALSLTHGSEYEFTYKDNKTCIDVKMDVKFSLTDGNTTIEFDGTNFTVK
SGDCALSDETAASLTLSNANDDFLTMSFKYDAQKNVLMGMMFTFAPSEYFTGKPPAASTS
IVDNGDLNLGGSNQLFRCTSSQRMTLTGKLEDIEYTMQMDMSNTQIQAFNIKDGNLSSDV
FVCSADKMTTSAQNITSDAPTTSSSNGTTEVTTQPGTTSSSNGTTSSVNTTSEAPTTAPP
TTPATTPTPLPAKSRYQVMDGKNACLILEGSFQLEVNNTSINVPQTKNVNVTGECATGNT
ASITITPIVKSDLTSLTMEFELDSKNFSHLVSWSAMGKIDKNDFNLTAKSYQNLSDARMY
YKCEKVGTFSDEALTIRFQELKVQAFNVENGDFSKNGLDCKGDIGPIPPSGSLPENKFFV
KEGNKTCIGFKGQINFNVPYLSKSGNPEQFVGIPDTFNTSGTCNTTVEGYYAQQLTVYFY
ENWNLTITFSSDVQQGKFLTAGTVTKYSISNIELYYEINNNLFPNADDSVMGTMGHFTAN
NVSLLETSKGKSYMCNKGATFELHDDNANVNNTRRLGMETKNLQFEAFKDGNTEDFGDPN
ECAGDEETNSIVPIAVGAALAGLVIIVLIAYLIGRKRSRKGYEQV
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcaaaattcattggagctgtactactgtgtgcgttgtcactgacacatggatcc
gaatacgagttcacgtataaagacaacaaaacatgcattgatgttaagatggatgtcaag
tttagccttactgatggaaatacaacaattgagtttgatggaacaaatttcacagtgaaa
agtggggattgcgcattgtcagatgagactgctgcatctttaaccctttcaaatgcaaat
gatgactttctgacaatgagcttcaagtatgatgctcaaaagaatgtcttaatgggaatg
atgttcacctttgctccatccgagtatttcacagggaagcctccggcagcttccaccagc
attgttgacaacggagacttgaatttgggagggagcaaccagctgttccgttgtacctct
tctcagaggatgacactgacaggaaaattagaggacatcgagtataccatgcagatggac
atgtccaacacacaaatacaggccttcaatatcaaggatggaaacctcagctctgatgtg
tttgtgtgcagtgcggacaaaatgaccacttctgcacagaacatcacctcagatgccccc
accacctccagttctaatggcaccacggaagtaactactcagccggggaccacctcgtcc
tctaatgggaccactagctctgtgaacaccacctcagaggctcctacaacagccccaccc
accacccctgctacaacccctaccccactccctgccaagtcccgataccaggtgatggat
ggaaagaatgcctgtcttatcttggagggcagtttccaacttgaagtgaataatacgtct
attaatgttccacaaacaaaaaatgtcaatgtcacaggagaatgtgctacaggaaatacc
gccagtattacaatcacgcctattgttaaatccgacttgacctccttgacaatggagttc
gagcttgattccaagaacttttcccacctagtatcatggagtgccatgggtaaaattgac
aaaaatgattttaatctcactgcaaaaagctatcagaatctatcagatgccagaatgtac
tacaagtgtgaaaaagttggaaccttctcagatgaagcgctaactatcagattccaggaa
cttaaagtacaagcgtttaatgtggaaaatggggatttctctaaaaatggactagactgc
aaaggagatattggaccaatccctccctctggaagccttccagagaacaagttctttgta
aaagaggggaacaagacatgtattggtttcaaaggacaaattaatttcaatgttccctac
ttgtcaaaatcaggaaatccagaacagtttgtaggtattccagacacttttaacacttct
ggtacctgcaacacaactgtggaagggtattatgctcaacaactgaccgtttacttctat
gaaaactggaatttaaccattactttttcctctgatgtgcagcaagggaaattcttaaca
gctgggacagtaacaaagtattccatctccaacattgagctgtattatgagataaataac
aatctcttccctaatgctgatgatagtgtgatgggaactatgggacattttactgctaac
aatgtgagtttgttggaaactagtaagggaaagagctacatgtgtaacaaaggagcaaca
tttgaacttcatgatgacaatgcaaatgttaataatactagacgtctcggcatggaaact
aaaaatttgcaattcgaggctttcaaggatggcaacactgaggattttggagatcccaat
gagtgtgctggagatgaggaaaccaacagcattgtgcccattgcagtgggggctgcactg
gcaggactcgtcatcatcgtgctaattgcgtacttgatcggacgaaagagaagccgtaag
ggttacgaacaggtctaa
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