Crassostrea virginica (eastern oyster): 111134590
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Entry
111134590 CDS
T09197
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 1-like
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
111134590
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cvn02000
]
111134590
Transporters [BR:
cvn02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
111134590
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
111134590
NCBI-ProteinID:
XP_022339458
UniProt:
A0A8B8EJ36
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Position
5:40451823..40475057
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AA seq
633 aa
AA seq
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MPKDASIPMNAMDNQSSLLGTDSDSSSQTERPVWSRRIEYLLSLFGYSVGLANIWRFPYL
CMRNGGGAFLIPFFVELIFCGVPLYFLEVCLGQFTGKSPLVLWSISPLFKGLGWLMMTIS
FVASWYYNTVIAWVIYYFVHAFFPTIPWATCDNWWNTEHCIVSLKDRLTLNSSLADVNQS
LPDLLFNFTDISTSYNTSQENQSLTYYTAAFEFWEYNVLRRSDGIEHPGSVQLLIIGVLF
ASWLLTFFCLIKGVRSVGKVVYVTVILPYVLLTVILIRGLTLDGAIDGIVFFLKPDFSKV
FQLQVWIEAGMQVFYSLGPAWGGIITMSSYNRFNYQCLRDAWYGTMADGLTSFYAGFVVF
SVLGFMAKDVGLTMEEISKSASGPGLVFVAYPEALTKLPMPHLWGVLFFFMLVTVGVDSQ
FGMFETVASGLADKFPKQLNSRKVQTTAFLCIFLFILGIPFTTNGGIYLFQLIDWYCAAF
CIMLGTFLECFVVAWVYGAERFSRDVELMIGKPVHIVMRILWCIITPAAMLLLFLASLTF
YAPPNSATYTYPDFAIAIGQFFAVLPLLPVLFFMIWEICHSEGTFIQRIKTLSRPDSSWG
PHSKRHWQTYKMYEYEGGLVNRIRVNLLGDHRR
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaggacgccagcattccgatgaatgctatggataaccaatcgtcattgctgggc
actgattcagattcctcgagtcagacggagagaccggtatggagtcgaagaatagaatac
ctcttgtcgcttttcgggtacagtgtagggcttgcaaacatctggagatttccttacctg
tgtatgagaaacggtggaggtgcgtttttgattccctttttcgtggaactgattttttgt
ggagtccccctttactttcttgaagtgtgtttgggccaatttacggggaaaagccctttg
gtattgtggtccatatctccccttttcaaaggactcggatggctgatgatgaccatttcc
ttcgtggcctcctggtattacaacaccgtcattgcttgggtcatttattattttgtccat
gcattctttccaacaattccctgggccacgtgtgataactggtggaacaccgaacattgc
atcgtcagtcttaaggacagactgaccctcaacagtagtctagccgacgtcaaccagtcc
cttccagatcttttgtttaactttactgacatctccacttcatataacacctcccaggaa
aatcaaagcttgacatattacacagcggcttttgaattttgggagtacaacgttctaagg
cgttctgatggaatcgaacatccgggttctgttcaactgctcattatcggcgtcttattc
gcatcctggcttcttaccttcttctgtttgataaagggggtgcgctctgttggaaaggtg
gtatatgtgacagtcatattgccttacgttcttctgacggtcatccttattcgtggtctg
acgctagatggcgctatcgacggaattgttttctttcttaaaccggacttttcaaaagtt
ttccaacttcaagtgtggatagaggcaggaatgcaagtgttctattcccttggtcctgct
tggggcggaatcattacaatgtccagttacaacaggttcaactatcagtgtctcagggat
gcctggtatggtactatggcggatggtctgaccagtttctacgctggttttgttgttttc
tcggttttgggttttatggccaaagacgtgggcttaaccatggaagaaatttcaaaatcg
gcctcgggacccggcctggtgtttgtggcgtaccccgaggccctcaccaagctgcccatg
cctcacctgtggggagtcttgtttttcttcatgttggtcacagtgggtgtggatagccag
ttcgggatgtttgagaccgttgctagcggtcttgctgataaattccctaagcagctgaat
tcacgcaaagtccagacgacggcatttctgtgtattttcctctttattttgggcatcccc
ttcacaactaacggaggcatctaccttttccagctgatagactggtattgtgctgctttt
tgcattatgcttgggacatttttggagtgttttgtagtagcttgggtctatggagcggag
cgtttcagtcgtgacgtagagttaatgataggaaaaccggtccacatcgtcatgagaata
ttatggtgcataattactccggcggccatgttgcttctattcctggcgtccctcaccttc
tacgcaccccccaacagcgccacctacacctacccagacttcgcgatagccattggtcaa
tttttcgctgttcttccgttgttacctgttttattttttatgatttgggaaatctgccat
tcagagggaacgtttatccagagaattaaaaccctatcccggcctgattccagttgggga
ccacacagcaaacgccattggcaaacctacaaaatgtatgagtatgaaggagggttggtc
aacagaatccgcgtcaatttgctgggggatcatcgacgatag
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