KEGG   Crassostrea virginica (eastern oyster): 111134722
Entry
111134722         CDS       T09197                                 
Name
(RefSeq) collagen alpha-2(IV) chain-like
  KO
K06237  collagen type IV alpha
Organism
cvn  Crassostrea virginica (eastern oyster)
Pathway
cvn04382  Cornified envelope formation
cvn04512  ECM-receptor interaction
cvn04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cvn00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    111134722
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    111134722
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    111134722
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cvn04147]
    111134722
   00536 Glycosaminoglycan binding proteins [BR:cvn00536]
    111134722
Exosome [BR:cvn04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   111134722
Glycosaminoglycan binding proteins [BR:cvn00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   111134722
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 111134722
NCBI-ProteinID: XP_022339743
UniProt: A0A8B8EJT0
LinkDB
Position
5:complement(63871160..63895127)
AA seq 1763 aa
MEPRVVIVFLVVLGLSLDLSLGAACKGCSSTVCLCAGQKGVRGAPGLPGLRGSQGLPGFI
GNEGPPGPPGLTGDDGEAGGIGEKGNRGVAGPQGMTGVPGVPGYEGLEGPVGPQGYPGCN
GTKGLKGLPGVEGLPGRQGPRGEPGFFGTKGDPGDGFYGFGPKGDPGDAGRQGPNGDPGI
PGRPGPPGPYGAEGPRGPAGTPGTKGPKGQMGDQGRNPAKGQKGVKGLPGLRGPKGIFNT
VIGPKPGEIKQGMKGEAGGPGYDGRPGLEGYPGQRGEPGLPGLQGDKGPFGMPGMQGMRG
KRGKDGPPGAFGYKGDKGENGIQGFDGLPGEIGRTGDPGFQGMRGDDGDPGPQGDPDGGG
QGRPGPRGRPGDLGPQGPQGFPGLDGTDGPIGRDGPPGPPGPDGIPGQRGLPGFSYPGDR
GDLGDFGQDGIPGLPGLPGLKGTIGDQGPDGDTVQGYPGEEGRVGRPGFDGLPGMRGDSG
PQGYPGIPGTGLDVTGPIGPVGFPGEEGDPGFPGEDGQDGIPGNRGDRGEDCGVCPGGQP
GSRGDPGDLGLDGLPGQPGQPGFQGQPGEAGVPGFPGLPGPKGQPGPNGIPGEIGRVGPK
GEPGDFEGLEPLKMKGKQGELGPQGAPGMAGLSGQVGQRGPKGFPGLPGERGRVGEPGFE
GLDGLPGIQGEDGLPGMPGDSIPGELGRSGPKGFPGVNGYQGLPGFKGEKGEPSQLNIPP
GKKGEPGIMGIPGEDGREGLPGLFGMKGEPGLGGLPGESGRVGMKGDNGRPGIPGERGLV
GQKGYPGVPGFAGLSGIPGNKGLPGESGVVGLPGLPGDQGIPGLDAPPVELLKGEPGDPG
LPGLEGERGYPGEIGRVGRPGFNGPKGIRGDAGAYGTPGFPGLKGEQGIVGFSGFPGLKG
IRGNDGIPGETGFVGSPGDAGLPGLPGQDGLKGQRGFPGADGLDGSPGREGPAGEPGLSG
LPGYDGLPGMRGETGFPGRAGDLGIPGQPGFPGQKGFRGEPGLPGLPGQFGLPGFKGESG
LAGFPGPDGLRGQPGLPGLQGVPGDEGFPGETGVVGRPGQDGFPGIKGERGNVGNSIPGD
PGRNGFSGSDGFPGLNGLKGEKGGPGPVGTPGVDGERGVTGLPGIPGEQGRTGVPGFKGE
NGENGLPGIDGFPGERGVTGLPGADGFPGLQGERGGFGYPGEQGLVGAPGEPGFDGSPGL
PGSDGQKGFPGDAGRDGLPGFPGMKGADGRFGFDGFKGEAGIPGEEGRAGRPGRKGDQGD
IGFVGRPGSPGEDAFGLIGLPGDPGIPGLSGRPGDKGIVGDNGLPGFPGLKGMRGEAGYG
FEGFKGERGVDGFPGERGRVGVNGIPGEPGLNGIPGLKGQQGLPGFPGEEGQVGDRGFPG
RQGSRGQDGIPGEQGQTGDRGFPGEVGRNGLPGDRGLDGLDGFKGERGDDGLPGLPGDSL
PMPTNILKPQPWQRGDKGSQGRDGDSGLNGLVGERGDDGSRGMTGEPGRNGEIGDPGVKG
PPGDNGLSGIPGERGRQGRPGPKGFPGIPGIEGPVGEGYGIYFAKHSQTTVVPQCPEGTV
KMWDGYSLVHVIGNGRSHGQDLGTSGSCLRRFSTMPIMFCNINNVCNLAWRNDYSYWLST
REPMLPMMNPVEGQALQRYISRCSVCEAVSEVVAVHSQETSIPNCPSGFRSLWTGYSFMM
TSGAGGRGAGQALSSPGSCLEDFRATPFIECHGNGRCNHYATSYSFWMATIRSFEEFRTP
ISETLKAGSQESRISRCRVCTRQ
NT seq 5292 nt   +upstreamnt  +downstreamnt
atggaaccgagggttgtgattgtattcctagtggttctgggactttccttggatctatct
cttggagcagcctgtaaggggtgcagctctactgtgtgtttatgtgcaggacagaaaggt
gtcaggggagcacctggtttacccggactgcggggttcccaggggttgccgggattcatc
ggtaacgagggcccccctggacccccaggcttaactggggatgatggagaagctggtggg
atcggtgagaaaggcaacaggggtgtcgctggacctcagggaatgaccggggtacctgga
gttcctggttatgagggactggaaggtcccgtgggacctcagggttatccaggatgtaat
ggcacaaagggattgaagggtctccctggagttgaaggattaccagggagacagggacct
cgcggagaaccaggattttttggcaccaagggtgatccaggagatggattttacggattt
ggtcccaagggagatcctggggatgctggcagacaaggaccaaacggtgaccctggtatc
ccagggcgacctggcccccccggaccatacggtgcagaaggccccaggggaccagccgga
acacctggaacgaaaggtcctaagggtcaaatgggtgaccagggacggaatccagccaaa
ggtcaaaagggtgtgaaaggactgcctggtttaagaggacccaaggggatctttaacact
gtaattggacccaagcctggtgaaatcaagcaaggaatgaagggtgaggcgggggggcct
ggttacgacggacgaccgggattggaaggctacccgggtcagcgtggagagccaggcttg
ccgggcctgcaaggagacaagggaccatttggaatgcccgggatgcaggggatgagggga
aaacgaggcaaggatgggccaccgggagcttttggctacaagggagataagggagaaaat
ggcatacaaggattcgatggtttacccggtgaaattggccgaactggagaccctggtttt
cagggaatgaggggtgatgacggagatccaggtccacagggagatcctgatggaggaggt
caaggtcgtccgggaccaagaggtcgtccaggagacctgggccctcaaggtccccaagga
tttccaggactggatggtaccgatggccccataggaagagatggacccccaggacctcca
gggcccgatggaattcctggacaaagaggactgccgggattttcctacccaggagacagg
ggagatttaggtgattttggtcaagatggaattcctggtttgcctgggttacccggattg
aaaggaacaataggagaccaaggaccagatggcgacacagttcagggttaccctggggaa
gaggggcgcgttggccgaccaggctttgatggactgccgggaatgcgtggagattcggga
ccccagggctatcccggtatcccggggactggactggatgtgacaggtcccattggacca
gtgggatttcctggagaagagggagatccaggatttcctggagaagatgggcaggacggt
attcctggaaatagaggtgatagaggagaggactgtggggtgtgccctggggggcagcca
ggatcacggggtgacccaggagatctgggtctggacggacttcccggacagccaggacag
cccggtttccagggacaacctggagaagctggggttcctggattcccaggattaccgggt
cctaaaggtcaacctggtcctaatggcattcctggagaaataggtcgagtaggtcctaag
ggagagcctggagattttgagggtctggaacccctgaagatgaaaggcaagcagggagaa
ctcggtccccagggggcaccaggcatggcagggttatctggacaagtcggtcaacgagga
cccaaaggcttccctggccttccaggagagaggggaagggttggagaaccaggatttgag
gggttggatggcttgcctggaattcagggagaggatggactacccggaatgcctggagat
tccattcccggtgaactgggccgatctgggcctaagggattccctggagtgaatggatat
caaggactacctggatttaagggtgagaaaggagaaccgtctcagctcaacattccaccg
ggaaagaagggggagcctgggatcatgggaattccaggggaagatggaagagagggactt
cctggattgtttggaatgaagggagaacctgggctaggaggacttcctggagaatcgggt
cgtgttggcatgaagggagacaatggccgaccagggattcccggggagaggggtctggtc
ggtcagaaaggttaccctggggtgcctgggtttgctggactgtctggtatcccaggaaac
aaaggattacctggggaatctggtgtagtgggactaccaggcttacctggggatcaagga
attcctggactagatgcacccccggtggagcttctgaagggagagcctggagacccaggg
ttgccaggactggagggggagaggggatacccaggggaaataggccgtgtgggcaggccg
ggctttaatggacccaagggaatcagaggtgatgctggagcctacggaacgccaggattc
cctggattgaagggagaacaaggaattgtgggattttctggtttccctggcttgaagggt
atccgcggaaatgatggaatcccaggagaaactggttttgtgggtagtccaggagatgct
gggttgccagggttaccaggtcaggatgggttaaaaggtcagcgaggttttcctggagca
gatggattagatggatctcccggtcgagaggggccagctggggagccaggcctatcgggc
ttgcctggatacgatggattgccgggtatgaggggtgaaactgggtttccaggacgagcg
ggagatttaggaatacctggtcagccaggatttccaggccagaaaggtttccgtggagag
cccggactccctgggctcccgggccagttcggtctgccaggatttaagggagaaagtggg
ttagcaggattccccggtccggatggtctgcggggccagcctgggttacctggactccag
ggggtgccaggagatgagggattcccaggagagactggagtggtgggaagacctggacaa
gatggtttcccaggaattaaaggagaaagaggaaatgtcggaaattctatcccaggagac
ccaggaaggaacggattttcaggatcagacggattcccgggattaaacggattaaaggga
gaaaagggtgggcccggtccggtagggactccaggtgttgatggagaacgaggggtcaca
ggtttaccgggaatacctggtgaacaggggagaacaggagtcccaggctttaaaggagaa
aatggagaaaacggtctccctggaattgatggctttccaggagaaaggggagtaacagga
ttaccaggagccgatggtttccctggacttcaaggggagcgtggtgggtttggatacccc
ggagagcagggattagtgggtgccccgggagagcccggctttgatggttcccccgggctg
ccaggttccgacggacagaagggtttccctggagatgccggacgtgatgggttgccaggt
ttcccaggaatgaagggagcagatggtcgctttggatttgacggatttaagggagaggct
ggaattcctggggaggagggtcgagctggccggccgggcagaaagggagatcaaggagac
attggctttgtgggtcgtcctggatctcctggtgaagatgccttcggtttgattggactg
ccaggtgaccctggaattccgggactatcaggtcgtcctggtgacaagggaattgtggga
gacaatggacttccgggatttccaggtctgaagggaatgaggggagaagctggctatggt
ttcgagggattcaaaggagagaggggagtggatggattccctggagaaagaggtcgagtt
ggagtaaatggtatccctggtgaacctggtttgaacggaatcccggggctcaaggggcag
cagggcttgcctggatttcccggagaggagggtcaggtgggagacaggggcttcccagga
agacagggcagcagaggacaggatggaatccccggggagcagggtcagactggagacagg
ggattccctggagaggtcgggcggaatggattgcctggcgaccgcggattggatggactt
gacggattcaagggagagcggggagatgatggattgccgggacttcccggagacagtctg
ccgatgccaactaacatcctcaagccccagccctggcagaggggagataaggggagtcag
ggcagggatggagactccggattaaatggactggtcggggagagaggtgatgatggctcc
cgaggaatgactggtgagccgggacgtaacggagaaattggtgatccaggagttaaaggg
cccccaggagataatggactctccggtattcccggggagcgaggacgacagggaaggcca
ggacccaagggattccctggaattcccggcatagaaggccccgtgggagagggctatgga
atttactttgccaaacacagccagacaaccgttgtacctcagtgccccgagggaacagta
aagatgtgggatggttactctttggttcacgtgatcggaaatggccgaagccacggacaa
gatctgggtacttccggcagttgcctgcgccgcttcagcaccatgcccatcatgttctgc
aacatcaacaacgtgtgcaacctggcgtggaggaatgactacagttactggctgtccacg
cgggagcccatgctgcccatgatgaatcccgtggaggggcaagctctccagagatacatc
agtcgctgctcagtctgtgaggcagtctctgaggtggtggctgtccacagtcaagagacc
tccattcccaactgtcccagtggattccgaagcttgtggacaggatatagttttatgatg
acctccggggctgggggacggggagctggccaggcgctatcctcacccggatcctgtctg
gaggacttccgggccacacccttcattgaatgccacggaaacgggcgatgcaaccactac
gccacatcctacagtttctggatggccacgatccgctcgttcgaggagttccgaacaccc
atctctgaaacattgaaggcgggatcgcaggaatcccgcatcagtcgctgtcgggtgtgt
acgcgtcagtaa

DBGET integrated database retrieval system