Crassostrea virginica (eastern oyster): 111134735
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Entry
111134735 CDS
T09197
Name
(RefSeq) cohesin subunit SA-1-like isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvn03036
]
111134735
Chromosome and associated proteins [BR:
cvn03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
111134735
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
INTS7_N
WipA_N
Motif
Other DBs
NCBI-GeneID:
111134735
NCBI-ProteinID:
XP_022339767
UniProt:
A0A8B8EGK9
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Position
5:complement(66476343..66494778)
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AA seq
1233 aa
AA seq
DB search
MRGARKAKSKAKVTVQGAFAETTSDLPIPENDSDSDFEEPMSVSGAGSGRGRKRGAGRGG
SAVKRPRQTGAAGRSRKKSEEEDDSGTGSLFDVVKSGKASLQSTVDEWIESYKNDRDTAL
VELIQFFIQGSGCKGTITPFMYANQEHAEIIRKMTEEFDEDSGDYPLIMSGPNWKRFRVN
FCEFVQVLVRQCQYSIIYDQYMMDNIISLLTGLTDSQVRAFRHTSTLAAMKLMTALVDVA
LNLSINLDNTQRQYESERQKQQPKRANDRLEMLLQRRQELEENQAEIRNMLTYIFKGVFV
HRYRDSQPEIRSICMAEIGTWMKKYPNMFLDDGYLKYVGWTLYDKNGDVRLCCLRSLQPL
YDTEELATKLELFTNRFKDRIVEMTLDKEHEVAVQAIKLVISILQFNEQILADKDCENVY
ELVYSSHRHVAQAAGEFLNAKLFRRDESSANKLKIHRGKKQSLNTPLLRDLVQFFIESEL
HEHGAYLVDSLWEINDMMKDWECMTDLLLEEPGKGEEYMDDKQETSLIEIMVCCVRQAAT
GESPVGRGTSKKLTSKENKQVLEDKTRLTEHFIATLPQLLLKYLMDGEKVANLLQIPQYF
DLDIYTTSRQEKNLELLLRYLHEIMEKHTDTEVLEAASKCYECLCSEEFAIAGKCDVARK
TLIDSLIAKFKESMHDFFAEGEEPDDDEIFALLACLKRIEALYSCHDLNSWDIWDDIFHI
IKSGNDSQGIPEEIVCKALACGSQALLWYLNKLDETNPNKDEMRALRKRLNDMMKYCHEL
LFHQQDKVGEEAFITICDLLVMFSRHLGEINEMMRPLVYEPDKNLQQQLSNFLTEKVFIE
DDDDDMDENVKIEELHKRRNFLASFCKLVIYNIVQIRMAADMFKHYMKFYNDYGDIIKAT
LGKAREINKVSTAKTLALSLTQLYRELQMEMGVVDRSSEAFQSLKELSRRFALSFGLDQV
KNREAVAAMHKEGIVFSVHVDEHHDISTPPPNLSFLEVICEFTNKLMKQDKKVVLQYLDK
HLPGGMMPQQRSEEWQSLFTYRNSLSQGDGEVHPITLKQASQRRYANKRKQMDASDHDSN
MSDWVDMSVGTPAPGVPVMASTAIKRRRMDEESVGGASEQSEDFQESYIGGAPPTPSTPA
PYMSWMTAQKGQQNPQRQLESMYNHYRQTGNLPPMEAEGSETSIADFESPRSQVMPPSYY
GDGSQNIEDPSQSGPRHHMTPSQVPSEMSHHGY
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgcggggagcacgtaaagcaaagtccaaagccaaggtgactgtacaaggagcatttgct
gagaccacatctgatttacccattccagaaaatgactccgacagtgactttgaggagccc
atgtctgtgtctggtgcaggaagtgggaggggcaggaaaagaggggcagggagaggaggc
agtgctgttaagcgtccacggcaaacaggagccgctgggaggagcaggaagaagagtgaa
gaggaggatgattctgggacagggtcgctgtttgatgttgtcaaaagtgggaaagcctcg
ctacagagtacagttgatgaatggatagaatcctataaaaatgaccgtgacacagcgctc
gtggaactgattcagttcttcattcagggctcaggatgtaaaggaactataactccattc
atgtatgccaaccaggagcatgcagagatcattcgtaaaatgacagaggaattcgacgag
gacagtggggactatccactgatcatgtcgggtccaaactggaagcgtttccgggtcaac
ttttgtgagtttgtacaggtgctcgttcgtcagtgtcagtacagcatcatctacgaccag
tacatgatggacaacatcatctccctactgactgggctgaccgactcccaggtccgagcc
ttcagacacaccagcacactggcagccatgaagctgatgacggctctagtggatgtggca
ctgaatctcagcattaacctggataacacacagcgtcagtacgaatcagagcgacaaaag
cagcagcccaagagggccaacgatcgactggagatgttgttacagagacgtcaggagttg
gaagaaaaccaagcagaaatcagaaacatgttgacttatatttttaaaggagtttttgtc
cacagatacagggactcgcagcccgagattcgctccatctgtatggctgagatcggcacc
tggatgaagaagtatcccaacatgttcctggacgacggatacctcaaatacgtgggatgg
acactgtacgacaagaacggtgacgtacgtctgtgctgcctgaggagtctccagcctctc
tatgacacggaggaactggccacaaaactggagcttttcaccaacaggttcaaggaccgg
atcgtagagatgacgctggacaaggaacatgaagtggctgtccaagccattaaattagtc
atcagtatactgcagttcaatgagcagatcctggctgacaaggactgcgagaatgtctac
gagttggtttactcctctcacagacacgtggctcaggcggccggcgagttccttaatgcc
aaactgttcaggcgcgacgagagcagtgccaacaaactaaagatccaccgtggcaagaaa
cagagcctgaacacgccactgcttcgtgacctggtgcagttcttcatcgaaagcgagtta
catgagcatggtgcttacctggtggacagtctgtgggaaatcaacgacatgatgaaagac
tgggagtgtatgactgacctacttctggaggagcccggcaagggagaggaatatatggac
gacaaacaagaaaccagtttgattgagattatggtgtgttgtgtccgtcaagcagctaca
ggggaatccccagtaggaaggggaaccagcaaaaagttgacatcaaaggaaaacaaacag
gtgctggaggataagacccggctgacagagcacttcatagccaccttacctcagctgctt
ctgaagtacttgatggatggagagaaggtggccaacctgcttcagatccctcagtacttt
gatctggacatctacaccaccagtcggcaggaaaagaacctggagctgttgctgcgatac
ttacatgagatcatggagaaacacacagacaccgaggttttagaggcagcctccaaatgt
tatgaatgtctctgctcggaggagtttgcaatcgccgggaagtgtgacgtggcacgtaaa
actctgattgacagcctcattgccaaattcaaggaatccatgcacgacttctttgcagag
ggggaggagccagatgatgatgaaatctttgccttgctggcgtgtctgaagcggatagag
gccctctacagttgccatgatctgaacagctgggacatctgggatgacatatttcacatc
atcaagtccgggaacgacagccagggaattccagaggagatcgtgtgtaaggctcttgcc
tgtggcagccaggcactactctggtacttgaacaagctggacgagactaaccctaacaaa
gacgagatgcgagccctgaggaagcgactgaatgacatgatgaagtactgccatgaattg
ctgttccaccagcaggacaaagtgggagaagaggcattcattacaatctgtgacctgttg
gtgatgttcagcagacatctcggtgagataaatgagatgatgcgccccctagtgtatgaa
cccgacaaaaacctgcagcagcagctcagcaacttcctcacagagaaagtcttcattgag
gacgatgatgatgacatggatgagaatgtgaaaattgaagagctccacaaacggagaaac
ttccttgcctcattctgtaagctggtgatttacaacatagtccagatccgcatggctgcc
gacatgttcaaacactacatgaagttttacaacgactatggggatattataaaagcaacc
ctcggaaaagcccgagaaatcaacaaggtgtcaacagccaaaaccctggccctcagtctg
acccagctgtatcgggagctacagatggagatgggggtggtggataggtcgtccgaagcc
ttccagtccctcaaggaattatcccggcggttcgctctgtcctttgggttggatcaggtc
aaaaatcgggaggctgtggcagccatgcacaaggaaggtattgtgttcagtgttcatgtg
gatgagcaccacgacatcagcaccccgccccccaatctctccttcctggaggtcatctgt
gaattcaccaacaaactgatgaagcaggacaaaaaagtggtgttgcagtacctggacaag
cacctgccaggagggatgatgcctcagcagcggtcagaggagtggcagtccctgttcacc
taccgtaacagcctgtcccagggagatggggaggttcatcccatcaccctcaagcaggcc
tcccagcggcgctacgccaacaagcgcaaacagatggacgcgtctgaccacgactctaac
atgagtgactgggtggatatgtctgttggaacacccgccccgggggtcccggtgatggcc
tccaccgccattaagcgccgtcggatggacgaggagagcgtgggcggggcctctgaacag
tcggaggacttccaggagtcctacattggtggagccccaccaacccccagcaccccagca
ccctacatgtcatggatgaccgcacagaaaggtcaacagaatcctcagagacagctggag
tccatgtacaaccactaccgccaaacaggaaacttaccaccgatggaggcagaaggaagt
gagaccagcattgcagactttgagagccccaggtcacaggtcatgccccccagttactat
ggtgatgggtcacaaaacatagaggatccctcgcaatccggaccacggcatcacatgacc
ccctctcaggtgccgtctgaaatgagtcaccatggatactaa
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