Crassostrea virginica (eastern oyster): 111134952
Help
Entry
111134952 CDS
T09197
Name
(RefSeq) ATP-binding cassette sub-family A member 3-like
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
111134952
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cvn02000
]
111134952
Transporters [BR:
cvn02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
111134952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
AAA_22
AAA_23
AAA_29
G-alpha
MukB
Motif
Other DBs
NCBI-GeneID:
111134952
NCBI-ProteinID:
XP_022340266
UniProt:
A0A8B8EKL6
LinkDB
All DBs
Position
5:81001087..81017821
Genome browser
AA seq
1724 aa
AA seq
DB search
MALGLGGQYLLLLKKEFLLAKRKPCSLVFQFILPLAFAIFLVLLRLLVSNENKAEKIYQP
LILEPFTPFFTENRTEILYTPNAAKAQDIMNNVQAKLGSPYTVQGFSSAAALEAHRDINT
ATVWGGVVFDTSSNDYASTIPNQVKYTLRVSRLNPQDSWQTTNVYPFFRTPGARNDNDEG
GTPNYYSTGFLTLQYLVGRAIINIQSANTNFDNLNFNMKKMAYQSYIKDNMLSVLQIWLP
FFIMLSFIITALQITKGVTYEKEKRLKESMKLMGMNEFMYWAAVFTKAMIFLLVASAFYI
LCLHVNVGKNGRVLNASDPSVVFVFFILYDISLITFCIMVSVFFNKANISSYAGGLLYFG
FFFPWFFLNSEYETMSAGAKIASCLPFNTAMAMGFNIIGIHEGTGDGAQWKNIAETPSVD
DNFTLGGVMLVLILDIFIHLVVTWYVGNVFPGEFGIPRPFYFPFTKSYWGCCDNTERDFD
PDLRQNTSNPKFIERDPPDLKPGIIIQKLRKVYGRGKKKKVAVEGTSINIYEGQITALLG
HNGAGKTTTMSMLTGFLPPSSGTAKVNGYDIMTNIERVRESIGLCPQHDILFETLTVREH
LNYFCKLKGTPTEEINSKVEEMIKILGMEAKADYAAGNLSGGQKRKLSVGIAIIGDSKVI
ILDEPTSGMDPAARRQTWDILRKFKENRTMVLSTHFMDEADLLGDRIAIMAEGVVKCCGT
SLFLKKAFGAGYHLVMVKDNTCDVSKVTALVTGHVPSAKLESEISAELSYLLPFDQSKRF
ADLFSDVEKKKSSLGIQSFGTTATTMEEVFLKVGESGKEDVETQRQELSAHAMNQSSPAR
HPVINPAFVREAEGEDIPMNNVSNGVSNGKTETNGDLSKYTEFNKEIKKNSGTALTFQQF
KSMIIKKAIHSWRNRIVTFVQLALPVIFTILALVIESNATEFAEEPSLNLDLAKFENPVT
IYTNPSNLIAAKYKDLFQTTEDASSATSFDSYVIDKMTKVGMTTFSKKYIVGLHDDAATN
TTSFFNGDPFHSPAIALAYTLDAILKAYKSDTSYGIQTTNFPFKRDLEGNSNRAAANTSS
GFSIAFVILFGVAFLTTSFILFLIKERMSGAKHLQKVSGLGSVTYWLANFLWDYVNYLVP
ALLMVIVFTCFQPDAYYLGSPSRISLVFLVYILFGWAALPYTYILHYLFKTPATGMVTIT
MSNILTGLATTLAIFMLMFPTFGTQDIALNLDWIFAIVFPHYNLGASIMNIYTNYQYINT
CERNRYQITCQIPSQSTGSCCMDNCGTSCLRFVLDYLSLTHPGIGKYVLMMALQGFVYLV
LVLMAELNVFNRILYFCKKEEHVHSAQVCNEEEDMVEEDDDVKKERERINDTDVSQIQQK
DALILKNLSKNYGRFRAVRGVSIGIPRQECFGLLGQNGAGKTTTFKMMTGDENVTGGNAF
LNKYDVKNHIKQVQQNLGYCPQFDALIDQMTGEEILYMFARLRGVQEQYIQRVVSELIKV
LMLEKYANRECGTYSGGNKRKLSTAISLIGDPPFIFLDEPTTGMDPGARRQLWNVLSQVR
ESGRTLILTSHSMEECDALCTRLVIMVNGQFVCLGSPQHLKVKFGNGYTLIVRLSQENSD
STKVKNFIKEKFPDSQVFDDHQDYLHFRIPDTSVSLSTVFSAMEEAQESLGLEDYSVHQT
TLEQVFLSFTHKQTPPKEKKKTKGCCGLCTCCSLCACTCCCGED
NT seq
5175 nt
NT seq
+upstream
nt +downstream
nt
atggccctcggattaggcggccagtatctcttgctgttaaagaaggagttcctcttggca
aaacggaagccatgctctttggttttccaattcatcttgcctcttgcgtttgctatcttt
ctcgtgctccttcgcttgttggtctccaacgagaacaaggcggagaagatctaccagcct
ctgattctggaacccttcacccccttctttaccgaaaatcggacggagattctgtatact
cccaacgcggcgaaggcccaggacattatgaataatgtccaagccaaactgggttctcct
tacacagtccaaggcttcagcagcgctgctgcattggaggcccacagggatatcaacaca
gccacggtgtggggaggggtcgtgttcgatacgtcatcaaacgactacgcctccaccatc
ccgaaccaggtcaagtacaccctgagggtgtctcgtctgaacccccaggactcgtggcaa
actaccaacgtctaccctttcttccgaacgccgggtgcccgaaatgataatgatgaagga
gggaccccaaattattacagcactggattcctgacgctgcagtacctcgtgggtcgcgcc
atcatcaacattcagtccgccaacaccaactttgacaacctgaactttaacatgaagaag
atggcgtaccagtcctatatcaaggataacatgcttagcgttctacagatctggctgcca
ttcttcatcatgctgagcttcatcatcaccgccctgcaaatcaccaaaggcgtgacgtat
gaaaaggaaaaaaggttaaaggaatctatgaagctgatgggaatgaacgagttcatgtac
tgggccgctgtcttcaccaaggcgatgatcttccttctggtggcttcagctttttacata
ctgtgcctccatgtgaatgtcggaaaaaatggccgcgtcctcaacgcctccgatccgtct
gtcgtcttcgttttctttatcctctacgacatctccctcatcactttctgtatcatggtc
agcgtcttcttcaacaaagccaacatatcctcctatgccggaggactcctgtatttcgga
ttcttcttcccgtggttcttcctcaactcggaatacgaaactatgtctgcgggagcaaag
atagcttcctgtctaccttttaatacggcgatggcaatgggcttcaacatcatcgggatc
cacgaaggaacaggagacggagcccagtggaagaacatcgctgagacgccctctgttgac
gataactttacgctagggggagtcatgctggtcctcatcctagatatcttcatacaccta
gtggtcacgtggtacgtcgggaacgtgttccccggagagttcggaatacctcggcctttc
tacttcccatttacgaagtcatactggggatgttgtgacaatacggagagggactttgac
ccggatctacgccagaacaccagtaatcccaaattcattgagcgcgatccccccgatttg
aagcctgggatcattatacaaaagctgagaaaggtctacggcagaggtaaaaagaagaag
gtggcggtagaaggcacatcgataaatatctatgagggccaaataacagccctactgggc
cacaatggcgcaggcaaaactaccaccatgtcaatgttgacaggtttccttcctccctcg
agcggcacggcaaaggtaaacggatatgacatcatgacaaacattgagagggtccgtgaa
agcattggtctctgtcctcagcacgacatcctgttcgaaaccttgactgttagagagcac
ctgaattacttctgcaagttgaaaggaacaccaactgaagaaatcaattcaaaggtagag
gaaatgatcaaaattctgggcatggaggcaaaggctgactatgctgccggaaatctgtca
ggcggacaaaaacggaaattatccgtaggaattgccatcattggggattctaaagttata
atattggacgaaccgacttccggcatggatccagcggcgcggcgccaaacctgggatatc
ctcagaaagtttaaggaaaaccgcaccatggtgctgtccactcatttcatggacgaagct
gatctccttggagacagaatagccattatggccgagggggtggtgaagtgttgtggcact
tccttgttcctgaagaaggccttcggagctggataccatcttgttatggtgaaagataac
acgtgcgacgtttccaaggtgacagcgttggttacgggacacgttccttccgctaagctt
gagagcgagatcagcgccgagctctcttatcttctgccattcgaccaatccaaacggttt
gctgatctcttctcggacgtggaaaagaaaaagtcttctttgggtattcagagttttgga
acaacagcgacaaccatggaggaggtctttctgaaagttggagaaagcggaaaagaagat
gttgaaacgcaaaggcaggagctcagtgcgcatgcgatgaaccagtcctccccggctaga
catccggttatcaatccggcctttgtgagagaagccgagggtgaggatattccgatgaat
aacgtgtcgaatggagtgtctaacggcaaaacggagacaaatggagatctctctaaatac
acagagtttaacaaagagattaaaaagaacagtggaacagccctcaccttccagcagttt
aagagcatgatcatcaagaaggccatacactcatggcgcaatcgcatcgtgaccttcgtc
caactggcacttccggttatctttacaattttggctttggtgatagaatcaaatgccacg
gaatttgctgaagaaccgtcacttaatttggatctggcgaaatttgaaaatcctgtgacc
atatatacaaacccaagtaatctgattgccgcaaaatataaagacttgtttcagactacg
gaagacgcgtcatcggcaacgtcattcgacagctacgtcatcgacaaaatgacaaaggta
gggatgaccacctttagcaagaagtacattgttggtttacatgatgatgcggccaccaac
accacaagttttttcaatggcgacccctttcacagccctgccatagcactggcttacacc
ctggacgccatcttgaaggcttacaagagcgacacgtcgtacggcattcagacgaccaac
tttccgttcaagagggacttagaggggaattctaacagagcggccgctaatacatccagt
ggtttctctatcgcctttgtcattctctttggtgtggccttcttaaccactagtttcatc
ctgttcctcatcaaagagaggatgtctggagcgaagcatttacagaaggtgagcggcttg
ggttctgtgacttactggctggccaacttcctctgggattacgtgaactacctggtgccg
gccctcctgatggtgatcgtcttcacctgcttccagccggacgcctactacctggggagt
ccctccagaatcagcctcgtgttcctggtttacattctgtttggctgggcggccttaccc
tacacctacatcctgcattatctgttcaaaactccagccaccggcatggtcaccatcacc
atgagcaacatcctgacaggtttagccactaccctggcaatcttcatgctgatgttcccg
acattcggaacacaagacatcgccctgaaccttgactggatctttgccatcgtcttcccg
cactacaacctgggagccagcatcatgaacatctacactaactaccaatacatcaacaca
tgcgagagaaaccgttaccaaatcacgtgtcagatcccgtcccagtccacaggaagttgc
tgcatggataactgtggaaccagttgtttgaggtttgtattggattacctcagtctcaca
catccggggatcgggaagtacgtcctgatgatggctcttcaggggtttgtgtatctggtg
ttggtcttaatggcggaacttaatgtcttcaaccgaatcctgtacttttgcaaaaaagaa
gaacatgtccattctgctcaagtgtgtaacgaagaggaggatatggttgaagaagatgat
gacgtcaagaaagaacgtgagagaataaatgacacagatgtttcgcaaatacagcagaaa
gatgcactcatattgaagaacctttcgaagaattacgggaggttccgagcggtaagaggc
gtcagtatcggaatccctcggcaggaatgttttggtttgctgggacaaaacggagccggt
aaaaccaccacgtttaagatgatgacgggggatgaaaacgtgactgggggaaacgccttc
ctgaacaagtatgacgtgaaaaaccacatcaaacaggtacaacagaacctgggatactgt
ccccagttcgacgcattgatagaccaaatgacaggagaagaaatcctctacatgtttgcg
cgcctgcgcggagttcaagagcaatacattcagagggtggtgtcggaactgatcaaagtt
ctgatgctggagaaatacgcgaatcgggagtgcggtacctacagtggaggcaacaaaagg
aagttgagcaccgccatttctctgatcggagatccgccctttatcttcctggacgagccc
accactgggatggatcctggggctcggcgccagttgtggaacgttctgtcacaagtccgg
gagagtggacggacgcttattctgacttcccacagcatggaggaatgtgatgctctctgt
acgcgacttgtcatcatggtcaacggacagtttgtctgtctcggaagcccacagcatcta
aaagtgaaattcggaaacgggtacaccttaattgtccggttatcacaggaaaacagcgat
tccacaaaagtcaagaactttatcaaggagaagtttccggacagccaggtgttcgacgat
caccaagactaccttcacttccggataccggacacttccgtttcgctgtccacggttttc
agcgctatggaggaagcccaggaaagcctgggactagaggactactccgtccaccagacc
actctggaacaagtgttcctctctttcactcacaaacaaaccccgccaaaggagaaaaag
aaaaccaaagggtgttgtggcctgtgcacgtgctgttctctgtgcgcgtgcacttgttgt
tgtggtgaggattga
DBGET
integrated database retrieval system
