Crassostrea virginica (eastern oyster): 111135084
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Entry
111135084 CDS
T09197
Name
(RefSeq) programmed cell death 6-interacting protein-like isoform X1
KO
K12200
programmed cell death 6-interacting protein
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03250
Viral life cycle - HIV-1
cvn03272
Virion - Hepatitis viruses
cvn04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
111135084
03272 Virion - Hepatitis viruses
111135084
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111135084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111135084
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvn04147
]
111135084
Membrane trafficking [BR:
cvn04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
111135084
Exosome [BR:
cvn04147
]
Exosomal proteins
Proteins found in most exosomes
111135084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
CDPS
ING
Motif
Other DBs
NCBI-GeneID:
111135084
NCBI-ProteinID:
XP_022340515
UniProt:
A0A8B8EK55
LinkDB
All DBs
Position
1:complement(8512990..8533322)
Genome browser
AA seq
921 aa
AA seq
DB search
MATFLAVPLKQTQEVELIKPLRGFIQNTFSQVEPDDYNHALNEFSKLRNLMIAKSVDKHE
SALDVLYRYYDQLCAIENKLPIAENQVRVNFKWRNAFDKESLFGGKQILGIASGAYEKVC
MLFNIAALQSQIAEVQNHDSDEGLKTSAKYFQLAAGIFGHLKDIVLSHVQQEPTPDLSPD
TLNALSALMVAQAQEAIYRKAAADRMKEAMVAKISHQCSDLYSDAMKLMQLASLKDLWPK
EWLPLVACKQAAFHGMAEFYQSCVSQQSKTYGEQIARLQKANELLTAAQTRGGAAFAFKT
EQGRIQRELQAAKKDNDFIYHDKIPDLKTLPGIGKAAIAKPSPFTNKPMSEKFTDLFDKL
VPLPVYEALTAFENRKSQIANAEIGRLREQTQLMNSILASLNLPAALEDLSGQKVPQSVI
EKAQQIKDIGGIQFLNKLMSDLPELLQRNREILNECINMIEEEEKSDKQLREQFKERWTR
TSSDKLTQPMRDESMKYKQILDTAINADRIVQEKFEKHKQAIDLLSKSTGDIEKALPSGG
GAHASEGSGVVKKLRQLMEQVETIKAEREVVENEFKEAKFDMTSKFFSALAADGAINEEM
LSESELDRIYGPLRQQVNESLQKQDSVMAQVQTANMEFCQAKASDQSGAQREAMLKDLAA
GFDMFMELKSNLEEGTKFYNDLTPLLVRLQNKISDFCFARKTEKDELMSDLQKSIASQPT
GPTPPPPSYQNPTASTQSRAPPARPPPPQFSSAGPPPSASTPSGAPSSQAGPPSYSSAPP
GPPAGAYSYTGGPTPYMSGQKTSAPTSATNKSTKSGGQPSAPPSQPSSQNYTGSGQQSWG
NAPYPQPGGGYQGMPMPAMPSGFNPYNPYMQYPQQQGYPNQGYPQQGYPQNYQGYPQQQQ
QYPQQGYPNNNPPYQQQNQWR
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgttccttgcagttccactgaaacaaactcaggaagttgaactgatcaaaccc
ctgagaggtttcattcaaaatacctttagtcaagttgaaccagacgactacaaccatgcc
ctcaacgaattcagcaagttgaggaatttgatgatcgcaaaatccgttgacaaacatgaa
tccgcgttagacgttttataccggtattatgaccagttgtgtgcaattgagaacaaacta
ccaatagctgaaaaccaggttcgggtgaattttaagtggaggaatgcttttgacaaggaa
tctttgtttggcggaaagcagatacttggaattgcctcaggtgcttatgagaaggtgtgc
atgctgtttaacattgctgctcttcagagtcagattgcagaggtccagaaccatgatagc
gatgaaggacttaaaacctctgccaaatatttccagctggctgcagggatctttggacac
ctcaaagacattgtcctttcacatgtccaacaagagcccacccctgacctgagtccagac
acgctcaatgcactgagtgcactcatggtggcccaggctcaggaggctatctacagaaaa
gctgctgcagacaggatgaaggaagccatggtggccaagatatctcaccagtgttctgac
ctttacagtgacgccatgaagttaatgcagctcgcatcactgaaagacctctggccaaag
gaatggcttccactagttgcatgcaaacaagcagcatttcatggaatggctgagttctac
cagagctgtgtatctcagcaaagcaagacttatggggaacagattgcccgcttacagaaa
gccaatgagctactgacagctgctcagacacgcggtggagcagccttcgcctttaagaca
gagcaaggccgaatccagagagagctgcaagcagccaagaaggataatgactttatctac
catgacaaaattcctgacctcaagactctgccaggaatcggcaaggctgcaattgccaag
ccatctcccttcactaacaaaccaatgagtgaaaagtttacagatctttttgataagctt
gttccattacctgtgtatgaagcattaactgcttttgaaaacagaaaatcacaaattgca
aatgctgaaattggtcgattacgagaacagacacaactcatgaacagcatattagcctcc
ctaaacttgcctgctgctttggaggatttgtctggacagaaggttcctcagtctgtgata
gagaaagcccaacagatcaaggatataggagggattcagttcctaaataagcttatgagt
gacttacctgagcttctccagaggaacagagaaatcctgaatgagtgtatcaatatgata
gaagaagaggagaaatccgacaaacagctacgggaacagttcaaagagagatggacgcga
acatcctcggataaactgacgcagccaatgagagacgagagcatgaaatacaaacagatc
ctggacacagcaatcaacgctgaccgcattgtacaggagaaattcgaaaaacacaagcaa
gccatagatctactgtctaaatcaacgggggacatagagaaggccctcccttcagggggt
ggtgcccatgcctctgagggtagtggggtggtgaagaagctccgccagttgatggagcag
gtggagaccattaaggctgagagggaggtggtggaaaacgagttcaaagaggccaagttc
gacatgactagcaagtttttctcagctcttgcagctgatggtgcaataaatgaggaaatg
ctatctgagagtgaattggaccgaatttatggaccattaagacagcaagtcaacgaaagt
ctacaaaaacaagattctgtgatggcacaggttcagacagccaatatggagttttgtcaa
gccaaagcttcagatcagagtggagctcagagggaggccatgttgaaggacctggctgct
ggctttgatatgttcatggagctgaagagcaacctagaggaggggaccaagttttacaat
gatctgacaccactgctggtccgtcttcagaacaaaatttccgacttttgttttgcacgg
aagacagagaaggatgagttgatgtctgatctacagaaatcaattgcgagtcagcctact
ggacccaccccaccccctcccagctatcagaaccccacagcttccactcagagtcgagcg
ccacctgctcgaccgccaccgccccagttctcttctgcggggccaccgccctcagcaagt
acacccagtggggcaccatcttcacaggcggggcctccctcttactctagtgcccctccc
ggaccccccgctggagcttattcctacacagggggtcccactccatatatgtctggacaa
aaaaccagtgcccctactagtgctactaacaaaagtacaaaatcaggtggccaaccctca
gctcctccctcccaaccttcctcccagaattacacaggatcaggtcagcagtcctggggt
aatgccccctacccccagcctgggggaggataccagggtatgcccatgccagcaatgcct
tcaggtttcaacccctataacccgtatatgcagtatcctcagcaacagggataccccaac
caaggctatccccagcagggatatcctcagaattaccaaggctatccacaacaacaacaa
cagtatccacagcagggataccctaataataacccaccctaccagcagcaaaaccagtgg
agatag
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