Crassostrea virginica (eastern oyster): 111135118
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Entry
111135118 CDS
T09197
Name
(RefSeq) uncharacterized protein LOC111135118 isoform X1
KO
K10798
poly [ADP-ribose] polymerase 2/3/4 [EC:
2.4.2.30
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
111135118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cvn03032
]
111135118
03036 Chromosome and associated proteins [BR:
cvn03036
]
111135118
03400 DNA repair and recombination proteins [BR:
cvn03400
]
111135118
Enzymes [BR:
cvn01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
111135118
DNA replication proteins [BR:
cvn03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
111135118
Chromosome and associated proteins [BR:
cvn03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
111135118
DNA repair and recombination proteins [BR:
cvn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
111135118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VIT
PARP
VWA_3
VIT_2
ubiquitin
VWA
BRCT
BRCT_2
VWA_2
Dsc3_N
Rad60-SLD
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
111135118
NCBI-ProteinID:
XP_022340576
EnsemblRapid:
LOC111135118
UniProt:
A0A8B8EL51
LinkDB
All DBs
Position
5:30974197..31022269
Genome browser
AA seq
2625 aa
AA seq
DB search
MPENPFEFPMTQRIDAVQESYNMSQTKTNNKNIFRDCVFVLEFDILTKLKEKQHWRKKIT
EHGGTVSYVFTRKVNYVVLFGDMLEKSSYKRKQAVRHNVPILRCEFITDCTEQGQILPTG
TYAVKEPVYGKNFKKGRITKQQKTNSSYLSAKRHIRSVNLNAVKSWSLDDPEAPSHNDDQ
YEVAKYALLKLAKMVHVIEVHALTSCDKFRLYHQGGKLEGEHILASEGPVVWYLDTADEV
LICFEQLYKRYTSGIMHMEPWQNPKFVSNQMGSHKLKMILDDLCSMNNDLDPDVGMFVEM
IWKEAIQEAEKMLTVSLQHMKSDKVDDAVIILQQIQQMKREKKSDDHLSELVEEFYQEAL
PHKQQYIMQDLSPQVVSQKLDLCQLIYDVLTVSEATDYSPAASTVAKYRALRCHMTKLDQ
SSDQCQIIQNMISDSEYSVAVHSIFEVGRTVEDILYETTSHSIGNTKLLMHASGPQNLLG
ILSRGLLLPQNVSEEHGVRRTDGGKLGYGIYFSNSFETCLQYAVPSVVSGIRLLIICEVA
LGECCDLTSIHRDLTAPPSGFHSCHGVKLTEDTPTDFMDDEFVIYNTSQQRVKYVVLFTL
PTDPPPRSIQTTPEEKNVEVVSSSVDVTDLKDLPNPLSKVTSGLISNNKSVRIPLKAVHI
RAKVIDMVAKVVVMQSYKNNMTEPIEAKYVFPLGETAAVCGFEAFINGKHIIGEIKEKKT
AHREYREAISKGHGAYLMDEEEPDVFTVSVGNLPPKCEVLIKVTYITELGVEGDGIALTI
PATVAQWVKDTALAQQTQSETTVLQIRDPVEYQISLQAAVEMPFEIRALKSSTHKLKYKK
TDTKAVVEIPKKSTFTEGFQLLIVLAEIHVPRMWVERHPEKDTLACMLAFYPEFEAAIDL
SPEVIFLVDLSNSMKGDSFYDSRKVLLLALGSLPEKSTFNIVLFGSSFKELFQFPHKITN
NSTNLAIKYIEEANPVMGCSDILSPLKSLYLLSPADGSRSIFLISDGFVGNKEDLFHLVA
KHSVKNRLFCLGVGSNRDSHTLRSLANQGGGTHEYYNRKSKSTWQAKITLQIEQATRPGI
SQVQVEWGPLTDKQDPPLQAPYRIPSLFSASRQVVYGLALKNCTQAKLTANVDGQEFDTI
VSTTELNFTEGVMLHQLAARAVIRDYEDGILSDSRLDHKVIKQERKPFIIELSKEFGIVT
PYTSFVAIEERKEGEASDGPSIKKLVAQESVDILTYMGWSNLDNMDEKDPVECVEELLRK
ANIAESFSQFEAERCYLSILDYREDLLLEENRGLCEKVLEKVDGFFSSQDSEKARLLRKE
YRQYLPIPKRLEVRTLTGKSIPVMAKTVAELKSEIMEKQGLSSTDSFRLIYDGKLLEDTT
ELDMPEDSSIFLVLRLRGGPCDGQEDPQQQSQQTIPKSLSAETSRKTIIPSRRKSKRKRI
STMMNVDTECGEPEALNITVPTLSAKGESVIMKDKPKEPGKLTEDGNVSSFDANIEKAFQ
VGENRNLIDNWNTEQFGFEIQCHAANGLEFASNEVHHASPGVAPCSTAGMAPVPSHSVRS
QAFIPTSPIFMPQLLAPVTGNMAPIPAASPAYSPISPSYSRTSPVYSPTSSAIFMPQLMA
TANIAPEPTNSPKSLENCPIVLAYSATSPAYSPTSPAFMPQFSLTANMAPIIPNYSPTSL
ACNLGSLSYPTSCSPSRSLTKFATAQLSCSNVDDEEDEEKDVDNDEIGNISIIDSDRGSS
LKRRSFVIRSTENRRRERRRKSRSRSRDRSLDSRDRSLDSSHSCREQSHKRRDRCRDKSW
DRRDRSRDRRWDSREKSRDRSWDRRDRCRDKSWDRRDRSRDRRWDSRERSRDRSWDSRDR
CRDRSWDSRDRSRDRRWDSRERSRNRRWDSRDRSRERRWDSRDRSRDRSLDSSDSCRERS
HKRRDRCRDRSWDSRDRSRNRRWDKRDRSRERRWDSRDKSRERSLDISDRNRDRRWDSRD
RSRDRRWDSRDRSRDRSLDSRDRSRDRRWDSRDRSRDKSWDSSDSCREQSQKIRDRCRDR
SWDSRERSRNRRWDSRDRNRERSLDSSNRNRDKSWDSRDRCRDRSWDSRDRSRDRRWDSR
ERSRNRSWGSRDRSRDGSLDSNKSSKESSQNRRVRSRDRERDSRERSRDRGQGKKGKSLD
IRYRGRRRDQKKRGSMHQRWDTGSRDRSRDRRWDSRERSREKRWNNRDKSRDRRWDSRDR
SRDRRDGGPRRRGRSGHRSWNGKEGDLEALKVVQKNTCIIKMHVEETKYDLQLLDEELQN
SLCWHRRELWPNRNSQQREEYFMTGYLYCPQMASRNIRTCAVDIWVQPQHTERFKDISWL
DEMHMNLVPEYFLTMPSIQPLMREKVEASLFQVQWEVGQPTLRNLLTSGMVGCIQTKQPN
GQFVLLLVIQQNPVGPTSLVCLMDGETVAERLQKFVRNHREQVNEHGLRLLETSSTDAPY
IDMWRSIRELDFQEDLSLPPPEEHGLWTLKDNLLEALGINAEKFEQFLKNQGFFSFPKSI
QNEISPVLSTFLVGIFTFMHEYKKRQLPKWLCKCEHVVDIYPIDPSSVIVNLNCMEEILT
IQFDFPMETFSQMGILRTKCTPYIRDLELGKNLTHCVDCILQSLY
NT seq
7878 nt
NT seq
+upstream
nt +downstream
nt
atgccagaaaatccttttgagtttccaatgacccaacgaatagatgccgtacaagagtct
tacaatatgtcacaaaccaaaaccaacaacaaaaacattttccgtgactgtgtttttgtg
ttggagtttgatattttgacaaaactgaaggaaaagcagcattggagaaagaagataact
gaacatggagggactgtgtcttatgtgtttaccagaaaggttaactatgttgtgttattt
ggtgatatgctggaaaaatcatcatacaagagaaaacaggcagttcgtcacaacgttccg
attctgaggtgtgaattcataacagactgtactgaacaaggacagattttgccaacagga
acatatgctgtaaaagaaccagtatatgggaagaattttaaaaaaggacgcataaccaag
caacagaagacaaattcttcatatcttagtgcaaaaaggcacatcaggagtgtgaatttg
aatgctgtcaagtcttggtcattggatgaccctgaagcaccctcacacaatgatgatcag
tatgaagtggctaaatatgctttactcaagttggcgaaaatggttcatgtgattgaggtc
catgctttgacatcatgtgacaagttcaggctctaccaccaaggaggaaaattggaagga
gagcacattttggcctctgagggaccggttgtctggtacctggacactgctgatgaagtc
ctcatctgttttgagcaattgtacaaacggtacacatctggtataatgcacatggagcct
tggcagaatcctaaatttgtctccaatcaaatgggatcacacaaactcaaaatgatattg
gatgacctttgttcgatgaacaatgaccttgacccagatgtgggtatgtttgtagagatg
atctggaaggaggccattcaagaggctgagaaaatgttaacagtgtcattgcaacacatg
aagtctgacaaggtggatgatgctgtgatcattttgcaacagattcagcagatgaagagg
gagaagaaatcagatgatcacctgtctgaattagtggaggaattttatcaggaagccctg
ccccacaaacagcagtatataatgcaggatctcagtcctcaagtggtttcacagaaactt
gatttgtgtcagttgatctatgatgtactaactgtcagtgaagccacagattactctcct
gctgccagcactgttgctaagtacagggctctaagatgtcacatgactaagttagaccaa
tcatcagatcagtgtcagatcatccaaaatatgatcagtgacagtgaatacagtgttgca
gttcacagtatctttgaagttggtagaactgttgaagacattttgtatgaaacaacttcc
cactcaataggcaacaccaaattgttgatgcatgcttcaggaccccagaatcttcttggt
attctatccaggggattactcctgccacagaatgtgtcggaggaacatggagtaaggagg
accgatggtggaaaactgggatatggaatttatttttcaaattcattcgagacctgcctt
cagtacgcagtacctagtgttgtgtcagggataagactgctaatcatctgtgaagtggct
ttgggagaatgttgtgacctgacctcaatccatagagacctcactgctccacctagtgga
ttccacagctgtcatggggtcaaattgacagaggacacgccgacagattttatggatgat
gagtttgtgatatacaacacatctcaacagagagtcaagtatgtggttcttttcacgctc
cccactgatcctccaccaagatccattcaaaccacaccagaagagaagaacgtggaagta
gtgtccagttcagtggatgtaacagatttgaaggacttgcctaaccccctctctaaagtc
accagtggtctgatcagtaacaacaagtctgtcagaatcccactcaaggccgtccacatc
agggccaaggtcattgatatggtagccaaggtggtggttatgcagtcctataaaaacaac
atgactgaaccaattgaggctaagtatgtcttccctctgggtgaaacagctgctgtgtgc
ggatttgaagcattcattaatggaaaacatatcataggagaaatcaaggagaagaagaca
gctcaccgtgagtacagagaagccattagtaaaggtcacggtgcatatttaatggatgag
gaggaacctgatgtatttactgtgagtgttggaaaccttcccccaaagtgtgaagtcctg
atcaaggtgacctatatcactgagctgggggtggaaggggatggaatagcgctgacaata
ccagcaacagtggcccagtgggtcaaggacacagccctggcccagcaaactcagtcggag
acaacagttcttcagatccgtgaccctgtagaatatcagatatctctccaagctgctgtg
gaaatgccatttgaaataagagctctgaaatccagcacacataaactgaagtacaagaaa
acagacaccaaagctgtagttgagatacccaagaagtcaacatttacagagggatttcag
ctcttgatcgtgctggcagaaattcatgttccacgtatgtgggtagaacgtcacccagaa
aaagacacattggcctgtatgctggctttctatcctgagtttgaggcggcaattgacctg
agtccagaggttatttttctggtggatttatctaattccatgaaaggagattcgttttat
gattctagaaaggttttgctgctagctttaggaagtcttcctgagaaatctacttttaac
attgtgttgttcgggtcttccttcaaggagctcttccagttccctcacaaaatcaccaac
aattctacaaatctggctatcaagtatatcgaggaagccaatcctgtgatgggatgcagt
gatatattgtctcccttgaaatcgttgtaccttctgagtccagcagatggcagtagaagc
atcttcctgatatctgatggctttgtaggaaacaaagaagacttgttccatcttgtggct
aaacactctgtaaaaaataggcttttctgtctgggagttggaagtaacagagacagtcac
acattacgtagtttggcaaaccagggaggagggacacatgaatattacaacaggaagtca
aagtccacctggcaagcaaagattacattacaaatagagcaagccacaagaccaggaata
tcccaggtacaggtggaatggggtccgctcacagacaaacaggatccacccctccaggcc
ccctataggatccccagcctcttcagtgcctcccggcaagtagtatatggacttgcactc
aagaattgcactcaggcaaaattgacagcaaatgttgatggacaagaatttgatacaatt
gtctcaacaacagaacttaatttcacagaaggagtgatgctgcaccagctcgctgccaga
gccgtcataagggactatgaagatggaattctgagtgacagcagactggaccacaaggtc
attaaacaagagcggaagccatttatcattgagcttagcaaagagtttgggattgttact
ccttatacaagttttgtagcaatagaggaaaggaaagagggggaagcaagtgatggtcca
agcatcaaaaagttggtggcccaagaatctgtggatatcctaacctacatgggatggagc
aatttagacaatatggatgaaaaggatcccgtggagtgtgtagaggaactgttacggaag
gccaacattgccgagagtttctcccagttcgaggccgagagatgctatctgtccatcttg
gattacagagaggacctccttctggaagagaacagaggcctgtgtgaaaaggtcctggaa
aaggtagatggatttttctcaagccaggattctgagaaagctagattactacggaaagag
tatcgtcaatatttaccaattcccaagaggctggaggtgagaactttgacaggaaaatct
attccggttatggcaaaaacagtggccgagttaaaatctgaaattatggagaaacagggc
ctgtcttccacagattctttcagacttatttatgatggaaaactattggaggatacaact
gaactagacatgccagaggattcctccattttcctggttttacgtttaagaggagggcca
tgtgacggacaagaggatccccagcaacagagtcagcagaccattccaaaatccttgtct
gcagagacatcaagaaaaaccatcatcccctccagaagaaaaagtaaaagaaaaaggata
tccacgatgatgaatgtggacactgagtgtggagaacctgaagctttgaatataactgtg
cccaccttgtcagcaaagggagagtcagtgatcatgaaggacaagccaaaagaacctgga
aaactgactgaggatggcaatgtctccagttttgatgcaaatattgaaaaggcatttcaa
gttggtgagaataggaatcttattgataattggaatacagaacagtttggttttgaaatt
caatgtcatgcagcaaatgggctggaatttgccagtaatgaagtacatcatgcctcacca
ggagttgcgccttgttcaacagcaggaatggcccctgtgccttcacacagtgttcgctca
caggcattcattcccacctcacccatattcatgcctcaattactggcacctgttactgga
aatatggcccctatacctgcagcctcgccagcatacagtccaatctcaccatcatacagt
cgcacttcaccagtatacagtcccacctcatcagcaatattcatgcctcaattaatggca
acagcaaatattgcccccgaacccacaaacagtcccaagtcattggaaaactgtcccatc
gtactggcatacagtgccacctcaccagcatacagtcccacctcaccagcattcatgcct
caattttctctaaccgcaaacatggcccccattatacctaattatagtcccacctcatta
gcatgcaatttaggctcactgtcttatccaacatcttgtagtcccagtcgtagtcttacc
aaatttgcaactgcacagttgtcgtgtagtaatgttgatgatgaggaagatgaagagaag
gatgtggacaatgatgagatagggaatatttcaataattgacagtgacagaggaagcagt
ttaaagaggaggtcatttgttataagaagcacagaaaacagaagaagagagagacgcagg
aagagtagaagtagaagcagggatagaagtttggatagtagagatagaagtttggatagt
agccatagctgcagagaacaaagtcataaaagaagagatagatgcagggacaaaagttgg
gatcgtagagatagaagcagggacagaagatgggatagtagagagaaaagcagggacaga
agttgggatcgtagagatagatgcagggacaaaagttgggatcgtagagatagaagcagg
gacagaagatgggatagtagagagagaagcagggacagaagttgggatagtagagataga
tgcagggacagaagttgggatagtagagatagaagcagggacagaagatgggatagtaga
gagagaagcaggaacagaagatgggatagtagagatagaagcagggagagaagatgggat
agtagagatagaagcagggatagaagtttggatagtagtgacagctgcagagaacgaagt
cataaaagaagagatagatgcagggacagaagttgggatagtagagatagaagcaggaac
agaagatgggataaaagagatagaagcagggagagaagatgggatagtagagataaaagc
agggaaagaagtttggatattagcgatagaaacagggacagaagatgggatagtagagat
agaagcagggatagaagatgggatagtagagatagaagcagggatagaagtttggatagt
agagatagaagcagggatagaagatgggatagtagagatagaagcagggataaaagttgg
gatagtagcgacagctgcagagaacaaagtcaaaaaataagagatagatgcagggacaga
agttgggatagtagagagagaagcaggaacagaagatgggatagtagagatagaaacagg
gaaagaagtttggatagtagcaatagaaacagggacaaaagttgggatagtagagataga
tgcagggacagaagttgggatagtagagatagaagcagggacagaagatgggatagtaga
gagagaagcaggaacagaagttggggtagtagagatagaagcagagatggaagtttggat
agtaataaaagcagcaaagaaagcagtcagaacaggagagttagaagcagggacagagaa
agagatagtagagaaagaagcagggatagaggtcagggaaaaaaaggcaagagtttggat
ataagatataggggcaggcgtagagatcaaaagaaaagaggaagtatgcatcaaagatgg
gataccggtagtagggatagaagcagggacagaagatgggatagtagagagaggagcagg
gaaaaaagatggaataatagagataaaagcagggataggagatgggatagtagagataga
agcagggacagaagggatggaggtcccaggagaagaggaagaagtggacacagaagttgg
aatgggaaagagggagatctagaggcattgaaagtcgttcaaaagaatacatgtattatt
aagatgcatgtagaagaaacaaagtatgatcttcagcttttagacgaagaacttcagaac
tcattatgctggcataggagggaactctggccaaacaggaatagtcaacaaagagaagaa
tactttatgactggttatttatactgtccacaaatggccagcagaaatatcagaacttgt
gcagtagatatttgggtgcaaccacaacacacagagagatttaaagatatttcttggcta
gatgaaatgcacatgaaccttgtgcctgaatatttcttaacaatgccaagtatacaacca
ttaatgagggagaaagtggaggccagccttttccaagtccaatgggaagttggtcagccc
actttgagaaatctcctaacttcaggaatggttggatgcattcaaaccaagcaacccaat
ggacaatttgtactcttgttggtaattcagcagaatcctgttggaccaacttctcttgta
tgcctaatggatggagaaactgtggcagagaggcttcagaagtttgtgaggaaccacaga
gagcaggtgaatgaacatggattgcggctgctggaaacttcctctacagatgcaccatat
attgacatgtggagaagcataagggagctggatttccaggaggacctgagcttaccacca
ccggaagagcatggcttatggacattaaaagacaatctattagaagcactgggaatcaat
gcagaaaaatttgaacagttcttgaaaaatcaaggttttttttcattcccaaaatcaata
cagaatgaaatttctcctgtgctctccacattcctggttggaatatttactttcatgcat
gaatacaaaaaaagacaactgcccaagtggctgtgtaagtgtgaacatgttgtagacata
taccctattgatccatcttccgtgattgttaacctcaactgtatggaagaaatcctcacc
attcagtttgactttcccatggaaaccttttctcaaatggggatactcagaacaaaatgc
actccttacatcagagatttggaacttgggaaaaatttgactcattgtgtggactgcata
ttgcaatcactttattaa
DBGET
integrated database retrieval system
