Crassostrea virginica (eastern oyster): 111135171
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Entry
111135171 CDS
T09197
Name
(RefSeq) CAP-Gly domain-containing linker protein 1-like isoform X1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
111135171
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvn03036
]
111135171
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cvn04812
]
111135171
Chromosome and associated proteins [BR:
cvn03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
111135171
Cytoskeleton proteins [BR:
cvn04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
111135171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
CCDC39
PKcGMP_CC
TBCA_PH
HMMR_N
Rod_CreS
FKBP15
ANG-1
Motif
Other DBs
NCBI-GeneID:
111135171
NCBI-ProteinID:
XP_022340677
UniProt:
A0A8B8EJ44
LinkDB
All DBs
Position
5:complement(18994207..19032675)
Genome browser
AA seq
1385 aa
AA seq
DB search
MSLPRPSGLKAPTKIGRPTGLPQPRSAGTGIPTPGSVHKAQSAIAKSARAAGISAHLAEK
YAAEMVQKLPDRKGRLRGPDSLPPPPPADDFIIGDRVWVSGTKPGHISYIGETKFAAGEW
AGVVLDNAEGKNDGSVQGVRYFQCEPKRGVFSRISKLSRTPGISSETPKPEDCVSESGGS
ISVKANGTTHLPSSLRPTTPKPISASRALSTSSSSLNKAGIASTPTAKKPSLKIGDRVLV
SGTKTGTLRYIGATDFAKGDWAGVELDEKQGKNDGAVSGKRYFECRPMFGLFAPVHKVTR
LTSGNITNSMSASTPSPQSRSLMNTSLRLSRERSGSQDSVSSISSTASSVSRSRVRLGVN
SLSSNQLPLLQARKQQLSPAKTSQRPSSLNLTATTQALQKALKEKEEHIEQLLKERDLER
AEVARAAAQVDEAEGQLANMRSEQDRFREDTDEAITRLRTRVEELEKERGDLNCKLEDER
RKVEDLQFQIEEEAISKDDLESRTEVDEEKLRSLEKDLKREKDRADKSEQEFFTLKAMLK
DQADRLTSTEDMNMSYLDQIEELTHKLSQAESKVKNFESSRLEEGAKASQVSIELVEKSN
RLVELEDVLSTRDKEIKELHSKLHEVVIYLETQRDEISANQVKKQKMQETINNLTTQLSG
RDEASNQLSTELQNLKSQLAELQRKLESSEEQNNQITEEKMKLEHQMSEMMKNSGDSSNR
LSMLNDQVQEKNRKIQDLQAALSNSTQQLGRLNDEIENLKGETIRERENIISKYEESSKT
QSSQIEDLQRELSKAKSKMQKMTEDHKKDNEDALSRKIKEIEELKKQLQESIEEQERQAV
QTQAHKQVLEKITMEKEALQHLKSWKFEKEKTEKQMKRLESEKDSANAELIQARVEVAKA
QSEREKFTADLSALEEKLQDLGGEMEKAHKAKSQIQKELDIIQAEKSKISEEKDHLQDEA
ISTKASLQQKDMHIEELQKEVERMKGEISTQQEMLAQVSQKESSSEAFQQRWEESQKALA
ELQTSYSEIEAERDTMKAQLTFANLVAEERTRLEDQNQKLNREVEDMQTRHSQELDELQN
ANTSLQSQLDNTSQLLEQKADELDKQKKQISNLQNENSSLEVYRSKVQKMETEKKEFLEK
ISKLENLLKEAKTNASNMASNDTAGNQLTEERDSALGQVEFLNSVIVDLQKKNSDLKTRL
EVMESGVVTNGDGDSSMESEAPKSRAPPRLFCDICDVFDKHDTDDCPLQAMDYEDDDAPS
PTHYHGDRKASRPYCDICEEFHDPCPVPDSQEECQTERADDSPPRLISRSAEQSPKNLQN
RDETGVLADATRTQGLPANHRFLKNEECNAGSDTPLGDEEVRDGGRELVPGGPKEGKMND
SCRVS
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgcctcgaccttcagggttaaaggcccccaccaaaattgggcgccccacaggg
cttccccagcctcgctcggcaggtacaggtatccccacccccggctctgtgcacaaagcc
caaagtgctatagctaagagtgcccgggctgctggtattagtgctcatctagcagaaaaa
tatgctgccgagatggtccaaaaactaccagatcggaaaggaagattgagaggtccagac
agtctaccccctcctccccctgcagatgacttcattattggagaccgagtatgggttagt
ggaactaaaccaggacatatttcctacataggcgagacaaagtttgctgctggagaatgg
gcaggtgttgtgttggacaatgcagaaggcaagaatgatggatccgtacaaggtgtccga
tacttccagtgtgagccaaagaggggtgtgttttcacgcatttctaaactctccagaacc
cctggaatatcttcagaaacccccaaacctgaggactgtgtgtcagaaagcggaggctcc
atatcggtgaaagcaaacgggacgacacacttgccgtctagtttacgacccacaacaccc
aaacctatctcggcatcccgggcattgtccacatcttcctcaagtctgaataaggcaggg
atagcatccacacccactgcaaagaaaccgtctctgaagataggagacagagtgctagtg
agtggaactaagactggaacactgcggtacataggggcaacagacttcgccaagggagat
tgggctggtgtagaactggatgagaaacaggggaaaaatgatggcgctgtttctggaaaa
aggtattttgagtgtcgaccaatgtttggactgtttgccccagtccataaggtcactcgg
ctgacatcaggcaacatcacgaacagtatgtcagcctctacaccaagtccccagtcacga
tccctgatgaacacgagtctgcgattatctcgtgagcgcagcggcagtcaagactcggtc
agctccatcagctcgacggcttcgagtgtctcccgaagtcgggtaaggctgggtgtcaac
tccctcagcagcaaccagctaccactgctccaggctcgtaaacaacaattatctccggcc
aaaaccagccaacgacctagttctctaaacctgaccgccacgacgcaggccctccagaaa
gcactgaaggagaaggaggagcatatagaacagctgttgaaggaacgtgaccttgagagg
gcagaggtcgcaagggcagctgcacaagtcgacgaggcggaaggacagctagccaacatg
agaagcgagcaggacagattccgggaggacacagatgaggctattacaagactgaggaca
agagtggaggagctagaaaaggagagaggggatctgaactgtaaactggaagatgaacgc
cgaaaagtggaggatctacaattccagattgaagaagaagctatctccaaagatgattta
gagtcaaggacagaagtagatgaggaaaagttaagatctctggaaaaagacttgaagaga
gaaaaagatagggcagataaaagtgaacaggaatttttcacattaaaggctatgttgaaa
gatcaggctgatcgtttgacatccacagaggatatgaacatgtcctaccttgatcagatc
gaggagctgacacataaactgtcgcaggcagaatccaaagtgaagaactttgaatcctct
cgtttagaggagggagccaaggcaagtcaagtaagcattgagctggtggaaaagtccaac
agacttgtggaattagaagatgttctttctactcgtgataaagaaatcaaagaactccat
tctaaactgcatgaagtggtgatttatcttgaaactcagcgtgatgaaataagtgccaat
caagtgaaaaaacaaaagatgcaagaaactataaataacttaactactcaattatcagga
agagatgaggcttcaaatcaactcagtacagaattgcaaaacttgaaatcccagttggca
gaactacaaagaaagttagaatcaagtgaagagcaaaacaaccaaatcacagaggagaaa
atgaaacttgagcaccaaatgagtgaaatgatgaaaaattcgggagatagctcaaacagg
ctatcaatgctcaacgatcaagtgcaggagaagaatagaaaaatacaggatctacaagcc
gccttgtccaattctactcaacaattgggaagacttaatgacgaaattgaaaatttaaaa
ggggagacaataagggaaagggaaaatattatttctaaatatgaagaatcttcaaaaacc
cagagcagtcaaattgaagatttacaaagggaattatcaaaagcaaagtctaagatgcag
aaaatgacagaagaccacaaaaaagacaatgaggatgcactttcacgtaaaattaaggag
attgaagagctgaagaagcaactacaggagagtattgaggagcaggagagacaagctgtc
cagactcaggcccacaaacaagtactagagaaaatcaccatggagaaagaggcactacag
catctaaaatcatggaagtttgaaaaagaaaagactgaaaaacagatgaaacgactggag
tcagagaaagattcggctaatgcggaactgattcaggccagggtagaggtggccaaggct
cagtctgagagagagaagttcacagctgacctcagtgcactggaagagaaactgcaggac
ctaggaggggaaatggaaaaagcccacaaagccaaaagtcagattcagaaagaattggac
ataatacaagcagaaaaatcaaagatatcagaggaaaaggatcatttacaagatgaagcc
atttcaactaaggcttctctacagcagaaagacatgcacatagaagaattacaaaaagag
gttgaaagaatgaaaggggaaataagcacacaacaggagatgctggctcaagtttcacag
aaagagtcttcctcagaagccttccagcagcgttgggaggagagtcagaaagctttggcg
gaactccagacatcgtactctgagatagaggcagagagggatactatgaaggctcagctt
acctttgcaaatctggtggctgaggagagaacaaggctggaagatcagaatcaaaaactg
aacagagaggtggaggacatgcaaaccagacacagccaagaactggatgagttacagaat
gccaatacatccctacagagtcagctggacaacacgtcacaactactagaacagaaggca
gacgagcttgacaaacagaaaaaacagatatccaatctgcaaaatgagaattcatcactg
gaggtgtacagatccaaagtccagaaaatggagacagagaaaaaggagttcctagagaag
atcagcaagctggagaatctcctgaaagaagccaagactaatgcttctaacatggccagt
aatgacaccgcaggtaaccagttaactgaagaaagggattctgctttgggtcaagtggaa
ttcttgaattctgtaattgtcgatctacaaaagaaaaactctgacttaaaaactcgtctg
gaggtaatggaatcaggggttgttaccaatggagatggtgatagttccatggaatcagag
gcccctaaatctcgagcccctcctcgcttattctgtgatatttgtgatgtgtttgataag
catgataccgatgactgtcctctacaagccatggactacgaagatgatgatgcaccctcc
cccactcattaccatggtgacaggaaagcttcacgtccctactgtgatatttgtgaagaa
tttcatgatccttgcccagttcctgatagtcaggaagaatgtcaaacagagagagctgat
gactcccctccgcgtcttatctcaagaagtgccgaacaatcgccaaaaaatctccagaat
cgcgatgagactggggtactggcagatgccacgagaacccagggattgcccgctaatcac
agattcctaaaaaatgaagaatgtaacgctgggtcagacactcctctgggagatgaagaa
gtccgtgatggggggcgggaactggtgcctggcgggccaaaggagggaaagatgaacgac
tcttgtcgcgtcagctaa
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