Crassostrea virginica (eastern oyster): 111135204
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Entry
111135204 CDS
T09197
Name
(RefSeq) transcription factor Dp-1-like isoform X1
KO
K04683
transcription factor Dp-1
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03083
Polycomb repressive complex
cvn04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
111135204
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
111135204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvn03000
]
111135204
03036 Chromosome and associated proteins [BR:
cvn03036
]
111135204
Transcription factors [BR:
cvn03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
111135204
Chromosome and associated proteins [BR:
cvn03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
111135204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
Motif
Other DBs
NCBI-GeneID:
111135204
NCBI-ProteinID:
XP_022340757
EnsemblRapid:
LOC111135204
UniProt:
A0A8B8ELH3
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All DBs
Position
5:81248409..81258881
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AA seq
478 aa
AA seq
DB search
MANSNTTLASLWVDDVQGSPVKIMATTPGKAAGNGTEIRQDIVRFYKDSGLEPVAKEAGL
LDANGDIATFQTQTVQAGGKAVQLVAVPISTTSPAKMSPLKEHTILPKQLTAQQLMQTMS
SPRQPMIPIDVSWRGGAQKRASDYTIEPDDGFGKRGKKGEKGGKGLRHFSMKVCEKVQRK
GVTSYNEVADELVAEFSDPRNLTSPSDQVQAYDQKNIRRRVYDALNVLMAMNIISKEKKE
IKWIGLPTNSAQECQNLEIEKQKRVERIKHKTQQLQELILQQIAFKNLVIRNRELESTQG
PPPQNSAIQLPFIIVNTSKKTVIDCSISNDKYEYLFNFDNTFEIHDDIEVLKRMGMALGL
EKGQCSTKDVNRAIKMVPKALEPYVIDLANGGMANSGPSGIRPMSADEGSSRYKVPAQPS
VQSSGSNSNDMDIEVANIYSQDSNLGSHSDLHSRATETPSEDFSDDSDTDRSSPVEMV
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggcaaattccaacacgaccctcgctagtttgtgggtcgacgatgtacaaggaagccca
gtgaagatcatggctactactccaggaaaagctgctggaaatggaacggagatccgacag
gatattgtacgcttctacaaagacagtggactggaaccagtggcaaaagaggctgggctg
cttgatgctaatggtgatattgcaacctttcagacacagactgttcaagctggtggaaag
gctgtgcagttagtcgctgtaccaatatcgaccacgtcgccagcaaaaatgtctccgctc
aaagaacatactatacttccaaagcagctgacagcccagcagttaatgcaaacaatgagt
agtcctaggcagccaatgattcccatcgacgtgtcatggaggggcggggctcagaaacga
gcgtcagattacacaatagaacccgatgatggctttggaaaacggggcaagaagggagag
aaaggtggtaaagggttgcgacacttctccatgaaagtctgtgaaaaggttcagaggaaa
ggagtgacatcatataatgaagtggcggacgaactggtggcagaattcagtgacccacga
aacctgacctcgccgtctgatcaggtacaagcttatgaccagaaaaacattcggaggaga
gtttatgatgccctgaatgtgctgatggccatgaacattatttccaaggaaaagaaggag
atcaaatggatcggacttcccacaaactcagctcaggagtgccaaaacttagagattgaa
aagcaaaagagagttgaaagaataaaacacaaaacacaacaactacaggagctcatactt
cagcaaatagcattcaagaacctggtcatcagaaaccgagaactagagagcacacaagga
cccccaccccagaactcagccatacaactgccctttatcatagtcaacaccagtaaaaag
acagtcattgattgctccatatcaaatgacaagtatgaatatttatttaactttgacaac
acctttgaaatacatgatgatattgaggtgttaaagagaatgggaatggcccttggtctg
gagaaggggcagtgtagcactaaagatgtcaatcgagctattaaaatggtccccaaagct
ttagagccatatgtgatagatttagccaatgggggaatggcaaactctggtcccagtggt
attagacccatgtctgcagatgaaggatcctcgaggtacaaagtccctgctcaaccttcc
gtccaatcctcaggtagcaacagcaacgacatggacattgaggtggccaatatatattca
caggactctaatctgggctcgcattcagacctgcattcaagggccacagaaacgccctcg
gaagacttttcagacgacagtgatacagacaggtctagtcctgtggaaatggtctag
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